BLASTX nr result

ID: Coptis25_contig00023528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023528
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313900.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_002300258.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002300259.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
ref|XP_003555984.1| PREDICTED: uncharacterized protein LOC100817...    69   5e-10
gb|ACU23868.1| unknown [Glycine max]                                   69   5e-10

>ref|XP_002313900.1| predicted protein [Populus trichocarpa] gi|222850308|gb|EEE87855.1|
           predicted protein [Populus trichocarpa]
          Length = 338

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/45 (71%), Positives = 40/45 (88%)
 Frame = -3

Query: 137 RIDTMELKAQIVKKIGHQRADKYFLHLSRFFSMKITKSEFDKICV 3
           RIDT+ELK+ I+KKIGHQRADKYF  L++ FS+KITK EFDK+C+
Sbjct: 9   RIDTLELKSLILKKIGHQRADKYFDELTQLFSLKITKCEFDKLCI 53


>ref|XP_002300258.1| predicted protein [Populus trichocarpa] gi|222847516|gb|EEE85063.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/45 (71%), Positives = 38/45 (84%)
 Frame = -3

Query: 137 RIDTMELKAQIVKKIGHQRADKYFLHLSRFFSMKITKSEFDKICV 3
           RIDT+ELK+ I+KK GHQRADKYF  L+R FS+KITK EFDK C+
Sbjct: 9   RIDTLELKSLILKKFGHQRADKYFDQLTRLFSLKITKCEFDKFCL 53


>ref|XP_002300259.1| predicted protein [Populus trichocarpa] gi|222847517|gb|EEE85064.1|
           predicted protein [Populus trichocarpa]
          Length = 358

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/46 (69%), Positives = 37/46 (80%)
 Frame = -3

Query: 140 LRIDTMELKAQIVKKIGHQRADKYFLHLSRFFSMKITKSEFDKICV 3
           +RIDT+ELK+ IVKKIG QRADKYF  L+R  S K+TK EFDK CV
Sbjct: 9   MRIDTLELKSLIVKKIGQQRADKYFYQLTRLLSSKVTKCEFDKFCV 54


>ref|XP_003555984.1| PREDICTED: uncharacterized protein LOC100817344 [Glycine max]
          Length = 356

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/44 (72%), Positives = 37/44 (84%)
 Frame = -3

Query: 137 RIDTMELKAQIVKKIGHQRADKYFLHLSRFFSMKITKSEFDKIC 6
           RIDT+ELKA IV+K+GHQRADKYF  L R  S KI+KSEFD+IC
Sbjct: 10  RIDTLELKALIVRKVGHQRADKYFDQLRRLLSSKISKSEFDRIC 53


>gb|ACU23868.1| unknown [Glycine max]
          Length = 356

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/44 (72%), Positives = 37/44 (84%)
 Frame = -3

Query: 137 RIDTMELKAQIVKKIGHQRADKYFLHLSRFFSMKITKSEFDKIC 6
           RIDT+ELKA IV+K+GHQRADKYF  L R  S KI+KSEFD+IC
Sbjct: 10  RIDTLELKALIVRKVGHQRADKYFDQLRRLLSSKISKSEFDRIC 53


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