BLASTX nr result
ID: Coptis25_contig00023522
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00023522 (337 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002304766.1| predicted protein [Populus trichocarpa] gi|2... 197 6e-49 ref|XP_002513469.1| conserved hypothetical protein [Ricinus comm... 192 3e-47 ref|NP_190747.1| transmembrane protein G1P-related 1 [Arabidopsi... 187 6e-46 ref|XP_002877824.1| hypothetical protein ARALYDRAFT_485534 [Arab... 187 6e-46 ref|XP_004154622.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome c... 184 6e-45 >ref|XP_002304766.1| predicted protein [Populus trichocarpa] gi|222842198|gb|EEE79745.1| predicted protein [Populus trichocarpa] Length = 200 Score = 197 bits (502), Expect = 6e-49 Identities = 93/109 (85%), Positives = 104/109 (95%) Frame = -3 Query: 329 NIGLRARQLQNRRLWTYALTFSCIAGFIIIVLNNFQDQLVFYVTPSEALEKFNSNPSKNK 150 +IG RARQLQNRRLWTYALTFSCIAGFI+IVLNNFQDQLVFY+TPS+A+EKF +NPSKNK Sbjct: 27 DIGARARQLQNRRLWTYALTFSCIAGFIVIVLNNFQDQLVFYITPSDAVEKFKNNPSKNK 86 Query: 149 FRLGGLVLENSVTQPVSSPEMEFIVTDLLTDILVKYQGSLPDLFREGHS 3 FRLGGLVLE SV P++SPEMEF+VTDL+TDILVKY+GSLPDLFREGHS Sbjct: 87 FRLGGLVLEGSVVHPLTSPEMEFVVTDLITDILVKYEGSLPDLFREGHS 135 >ref|XP_002513469.1| conserved hypothetical protein [Ricinus communis] gi|223547377|gb|EEF48872.1| conserved hypothetical protein [Ricinus communis] Length = 254 Score = 192 bits (487), Expect = 3e-47 Identities = 88/111 (79%), Positives = 103/111 (92%) Frame = -3 Query: 335 KQNIGLRARQLQNRRLWTYALTFSCIAGFIIIVLNNFQDQLVFYVTPSEALEKFNSNPSK 156 K +IG RARQLQ RRLWTYALTFSCIAGFI+IV+NNFQDQ+VFY+TP++A+EK+ +NP K Sbjct: 68 KIDIGARARQLQTRRLWTYALTFSCIAGFIVIVINNFQDQMVFYITPTDAMEKYKTNPEK 127 Query: 155 NKFRLGGLVLENSVTQPVSSPEMEFIVTDLLTDILVKYQGSLPDLFREGHS 3 NKFRLGGLVLE SV QP +SPEMEF++TDL+TDILV+YQGSLPDLFREGHS Sbjct: 128 NKFRLGGLVLEGSVAQPATSPEMEFVITDLVTDILVRYQGSLPDLFREGHS 178 >ref|NP_190747.1| transmembrane protein G1P-related 1 [Arabidopsis thaliana] gi|1657615|gb|AAB18126.1| G1p [Arabidopsis thaliana] gi|3068706|gb|AAC14406.1| putative transmembrane protein G1p [Arabidopsis thaliana] gi|28416645|gb|AAO42853.1| At3g51790 [Arabidopsis thaliana] gi|110743169|dbj|BAE99476.1| Cytochrome C Maturation G1p [Arabidopsis thaliana] gi|332645322|gb|AEE78843.1| transmembrane protein G1P-related 1 [Arabidopsis thaliana] Length = 256 Score = 187 bits (476), Expect = 6e-46 Identities = 87/111 (78%), Positives = 102/111 (91%) Frame = -3 Query: 335 KQNIGLRARQLQNRRLWTYALTFSCIAGFIIIVLNNFQDQLVFYVTPSEALEKFNSNPSK 156 K +IG +ARQ+QNRRLWTYALTFSCIAGF++IVLN FQDQLVFY+TPS+A+EKF NP+K Sbjct: 69 KIDIGAKARQMQNRRLWTYALTFSCIAGFVVIVLNQFQDQLVFYLTPSDAMEKFAENPTK 128 Query: 155 NKFRLGGLVLENSVTQPVSSPEMEFIVTDLLTDILVKYQGSLPDLFREGHS 3 NKFRLGGLVLE SV QP +S EMEF++TDL+TDILV+Y+GSLPDLFREGHS Sbjct: 129 NKFRLGGLVLEGSVAQPAASQEMEFVITDLITDILVRYKGSLPDLFREGHS 179 >ref|XP_002877824.1| hypothetical protein ARALYDRAFT_485534 [Arabidopsis lyrata subsp. lyrata] gi|297323662|gb|EFH54083.1| hypothetical protein ARALYDRAFT_485534 [Arabidopsis lyrata subsp. lyrata] Length = 257 Score = 187 bits (476), Expect = 6e-46 Identities = 87/111 (78%), Positives = 102/111 (91%) Frame = -3 Query: 335 KQNIGLRARQLQNRRLWTYALTFSCIAGFIIIVLNNFQDQLVFYVTPSEALEKFNSNPSK 156 K +IG +ARQ+QNRRLWTYALTFSCIAGF++IVLN FQDQLVFY+TPS+A+EKF NP+K Sbjct: 68 KIDIGAKARQMQNRRLWTYALTFSCIAGFVVIVLNQFQDQLVFYLTPSDAMEKFAENPTK 127 Query: 155 NKFRLGGLVLENSVTQPVSSPEMEFIVTDLLTDILVKYQGSLPDLFREGHS 3 NKFRLGGLVLE SV QP +S EMEF++TDL+TDILV+Y+GSLPDLFREGHS Sbjct: 128 NKFRLGGLVLEGSVAQPAASQEMEFVITDLITDILVRYKGSLPDLFREGHS 178 >ref|XP_004154622.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome c-type biogenesis protein CcmE-like [Cucumis sativus] Length = 259 Score = 184 bits (467), Expect = 6e-45 Identities = 85/109 (77%), Positives = 102/109 (93%) Frame = -3 Query: 329 NIGLRARQLQNRRLWTYALTFSCIAGFIIIVLNNFQDQLVFYVTPSEALEKFNSNPSKNK 150 +IG RARQLQ RRLWTYALTFSCIAGF++IVL+NFQ+ L+FYVTP++ALEKF++NPSKNK Sbjct: 78 DIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYVTPTDALEKFSANPSKNK 137 Query: 149 FRLGGLVLENSVTQPVSSPEMEFIVTDLLTDILVKYQGSLPDLFREGHS 3 FRLGGLVLE SVT P SS +MEF++TDL+TD+LV++QGSLPDLFREGHS Sbjct: 138 FRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDLFREGHS 186