BLASTX nr result

ID: Coptis25_contig00023522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023522
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304766.1| predicted protein [Populus trichocarpa] gi|2...   197   6e-49
ref|XP_002513469.1| conserved hypothetical protein [Ricinus comm...   192   3e-47
ref|NP_190747.1| transmembrane protein G1P-related 1 [Arabidopsi...   187   6e-46
ref|XP_002877824.1| hypothetical protein ARALYDRAFT_485534 [Arab...   187   6e-46
ref|XP_004154622.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome c...   184   6e-45

>ref|XP_002304766.1| predicted protein [Populus trichocarpa] gi|222842198|gb|EEE79745.1|
           predicted protein [Populus trichocarpa]
          Length = 200

 Score =  197 bits (502), Expect = 6e-49
 Identities = 93/109 (85%), Positives = 104/109 (95%)
 Frame = -3

Query: 329 NIGLRARQLQNRRLWTYALTFSCIAGFIIIVLNNFQDQLVFYVTPSEALEKFNSNPSKNK 150
           +IG RARQLQNRRLWTYALTFSCIAGFI+IVLNNFQDQLVFY+TPS+A+EKF +NPSKNK
Sbjct: 27  DIGARARQLQNRRLWTYALTFSCIAGFIVIVLNNFQDQLVFYITPSDAVEKFKNNPSKNK 86

Query: 149 FRLGGLVLENSVTQPVSSPEMEFIVTDLLTDILVKYQGSLPDLFREGHS 3
           FRLGGLVLE SV  P++SPEMEF+VTDL+TDILVKY+GSLPDLFREGHS
Sbjct: 87  FRLGGLVLEGSVVHPLTSPEMEFVVTDLITDILVKYEGSLPDLFREGHS 135


>ref|XP_002513469.1| conserved hypothetical protein [Ricinus communis]
           gi|223547377|gb|EEF48872.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 254

 Score =  192 bits (487), Expect = 3e-47
 Identities = 88/111 (79%), Positives = 103/111 (92%)
 Frame = -3

Query: 335 KQNIGLRARQLQNRRLWTYALTFSCIAGFIIIVLNNFQDQLVFYVTPSEALEKFNSNPSK 156
           K +IG RARQLQ RRLWTYALTFSCIAGFI+IV+NNFQDQ+VFY+TP++A+EK+ +NP K
Sbjct: 68  KIDIGARARQLQTRRLWTYALTFSCIAGFIVIVINNFQDQMVFYITPTDAMEKYKTNPEK 127

Query: 155 NKFRLGGLVLENSVTQPVSSPEMEFIVTDLLTDILVKYQGSLPDLFREGHS 3
           NKFRLGGLVLE SV QP +SPEMEF++TDL+TDILV+YQGSLPDLFREGHS
Sbjct: 128 NKFRLGGLVLEGSVAQPATSPEMEFVITDLVTDILVRYQGSLPDLFREGHS 178


>ref|NP_190747.1| transmembrane protein G1P-related 1 [Arabidopsis thaliana]
           gi|1657615|gb|AAB18126.1| G1p [Arabidopsis thaliana]
           gi|3068706|gb|AAC14406.1| putative transmembrane protein
           G1p [Arabidopsis thaliana] gi|28416645|gb|AAO42853.1|
           At3g51790 [Arabidopsis thaliana]
           gi|110743169|dbj|BAE99476.1| Cytochrome C Maturation G1p
           [Arabidopsis thaliana] gi|332645322|gb|AEE78843.1|
           transmembrane protein G1P-related 1 [Arabidopsis
           thaliana]
          Length = 256

 Score =  187 bits (476), Expect = 6e-46
 Identities = 87/111 (78%), Positives = 102/111 (91%)
 Frame = -3

Query: 335 KQNIGLRARQLQNRRLWTYALTFSCIAGFIIIVLNNFQDQLVFYVTPSEALEKFNSNPSK 156
           K +IG +ARQ+QNRRLWTYALTFSCIAGF++IVLN FQDQLVFY+TPS+A+EKF  NP+K
Sbjct: 69  KIDIGAKARQMQNRRLWTYALTFSCIAGFVVIVLNQFQDQLVFYLTPSDAMEKFAENPTK 128

Query: 155 NKFRLGGLVLENSVTQPVSSPEMEFIVTDLLTDILVKYQGSLPDLFREGHS 3
           NKFRLGGLVLE SV QP +S EMEF++TDL+TDILV+Y+GSLPDLFREGHS
Sbjct: 129 NKFRLGGLVLEGSVAQPAASQEMEFVITDLITDILVRYKGSLPDLFREGHS 179


>ref|XP_002877824.1| hypothetical protein ARALYDRAFT_485534 [Arabidopsis lyrata subsp.
           lyrata] gi|297323662|gb|EFH54083.1| hypothetical protein
           ARALYDRAFT_485534 [Arabidopsis lyrata subsp. lyrata]
          Length = 257

 Score =  187 bits (476), Expect = 6e-46
 Identities = 87/111 (78%), Positives = 102/111 (91%)
 Frame = -3

Query: 335 KQNIGLRARQLQNRRLWTYALTFSCIAGFIIIVLNNFQDQLVFYVTPSEALEKFNSNPSK 156
           K +IG +ARQ+QNRRLWTYALTFSCIAGF++IVLN FQDQLVFY+TPS+A+EKF  NP+K
Sbjct: 68  KIDIGAKARQMQNRRLWTYALTFSCIAGFVVIVLNQFQDQLVFYLTPSDAMEKFAENPTK 127

Query: 155 NKFRLGGLVLENSVTQPVSSPEMEFIVTDLLTDILVKYQGSLPDLFREGHS 3
           NKFRLGGLVLE SV QP +S EMEF++TDL+TDILV+Y+GSLPDLFREGHS
Sbjct: 128 NKFRLGGLVLEGSVAQPAASQEMEFVITDLITDILVRYKGSLPDLFREGHS 178


>ref|XP_004154622.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome c-type biogenesis
           protein CcmE-like [Cucumis sativus]
          Length = 259

 Score =  184 bits (467), Expect = 6e-45
 Identities = 85/109 (77%), Positives = 102/109 (93%)
 Frame = -3

Query: 329 NIGLRARQLQNRRLWTYALTFSCIAGFIIIVLNNFQDQLVFYVTPSEALEKFNSNPSKNK 150
           +IG RARQLQ RRLWTYALTFSCIAGF++IVL+NFQ+ L+FYVTP++ALEKF++NPSKNK
Sbjct: 78  DIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYVTPTDALEKFSANPSKNK 137

Query: 149 FRLGGLVLENSVTQPVSSPEMEFIVTDLLTDILVKYQGSLPDLFREGHS 3
           FRLGGLVLE SVT P SS +MEF++TDL+TD+LV++QGSLPDLFREGHS
Sbjct: 138 FRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDLFREGHS 186


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