BLASTX nr result

ID: Coptis25_contig00023520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023520
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524389.1| protein binding protein, putative [Ricinus c...    91   1e-16
ref|XP_002281060.1| PREDICTED: uncharacterized protein LOC100242...    89   5e-16
emb|CAN78722.1| hypothetical protein VITISV_020005 [Vitis vinifera]    89   5e-16
ref|XP_002315966.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002311428.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13

>ref|XP_002524389.1| protein binding protein, putative [Ricinus communis]
           gi|223536350|gb|EEF38000.1| protein binding protein,
           putative [Ricinus communis]
          Length = 665

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/77 (57%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
 Frame = -1

Query: 230 GSHTAQTGVLGSTFPGGLPLYQPXXXXXXXXXSPRP-NANASGLDVPMYWQEFYPPSTGL 54
           G H AQ G+ GS F GGLPLYQP         SP P +AN +GL +PMYWQ +Y P  GL
Sbjct: 140 GPHNAQIGLTGSNFQGGLPLYQPGGNIGTWGASPPPPSANGNGLAMPMYWQGYYAPPNGL 199

Query: 53  SHVHQQSLLQPSPGLPM 3
            H+HQQSLL+P PGL M
Sbjct: 200 PHLHQQSLLRPPPGLSM 216


>ref|XP_002281060.1| PREDICTED: uncharacterized protein LOC100242198 [Vitis vinifera]
          Length = 616

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/76 (57%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
 Frame = -1

Query: 227 SHTAQTGVLGSTFPGGLPLYQPXXXXXXXXXSPRP-NANASGLDVPMYWQEFYPPSTGLS 51
           SH AQ G+ GSTF GGLPLYQP         +P P  AN SGL +PMYWQ +Y P  GL 
Sbjct: 132 SHNAQLGLPGSTFQGGLPLYQPGGNLGSWGPAPPPPTANGSGLTMPMYWQGYYGPPNGLP 191

Query: 50  HVHQQSLLQPSPGLPM 3
           H+HQQSLL+P P L M
Sbjct: 192 HLHQQSLLRPPPVLSM 207


>emb|CAN78722.1| hypothetical protein VITISV_020005 [Vitis vinifera]
          Length = 665

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/76 (57%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
 Frame = -1

Query: 227 SHTAQTGVLGSTFPGGLPLYQPXXXXXXXXXSPRP-NANASGLDVPMYWQEFYPPSTGLS 51
           SH AQ G+ GSTF GGLPLYQP         +P P  AN SGL +PMYWQ +Y P  GL 
Sbjct: 148 SHNAQLGLPGSTFQGGLPLYQPGGNLGSWGPAPPPPTANGSGLTMPMYWQGYYGPPNGLP 207

Query: 50  HVHQQSLLQPSPGLPM 3
           H+HQQSLL+P P L M
Sbjct: 208 HLHQQSLLRPPPVLSM 223


>ref|XP_002315966.1| predicted protein [Populus trichocarpa] gi|222865006|gb|EEF02137.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/77 (55%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = -1

Query: 230 GSHTAQTGVLGSTFPGGLPLYQPXXXXXXXXXSPRP-NANASGLDVPMYWQEFYPPSTGL 54
           GSH    G     F GG+PLYQP         SP P NAN SGL +PMYWQ FY P  GL
Sbjct: 139 GSHNGPGGQPAMNFQGGMPLYQPGGSLGTWGASPPPPNANGSGLAMPMYWQGFYAPPNGL 198

Query: 53  SHVHQQSLLQPSPGLPM 3
            H+HQQSLL+P PGL M
Sbjct: 199 PHLHQQSLLRPPPGLAM 215


>ref|XP_002311428.1| predicted protein [Populus trichocarpa] gi|222851248|gb|EEE88795.1|
           predicted protein [Populus trichocarpa]
          Length = 631

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 41/77 (53%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
 Frame = -1

Query: 230 GSHTAQTGVLGSTFPGGLPLYQPXXXXXXXXXSPRP-NANASGLDVPMYWQEFYPPSTGL 54
           GS+    G+ GS F GGLPLYQP         SP P NAN +GL +PMYWQ +Y P  G+
Sbjct: 132 GSNNGPGGLPGSNFQGGLPLYQPGGSLGAWGVSPPPPNANGNGLAMPMYWQSYYGPPNGI 191

Query: 53  SHVHQQSLLQPSPGLPM 3
            H+H QSLL+P PGL M
Sbjct: 192 PHLH-QSLLRPPPGLAM 207


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