BLASTX nr result
ID: Coptis25_contig00023518
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00023518
(928 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27315.3| unnamed protein product [Vitis vinifera] 186 5e-45
ref|XP_002273558.1| PREDICTED: uncharacterized protein LOC100268... 186 5e-45
ref|XP_002312290.1| predicted protein [Populus trichocarpa] gi|2... 169 1e-39
ref|XP_002512056.1| conserved hypothetical protein [Ricinus comm... 159 9e-37
gb|AAF98582.1|AC013427_25 This gene may be cut off [Arabidopsis ... 154 3e-35
>emb|CBI27315.3| unnamed protein product [Vitis vinifera]
Length = 1177
Score = 186 bits (473), Expect = 5e-45
Identities = 103/202 (50%), Positives = 133/202 (65%), Gaps = 3/202 (1%)
Frame = -2
Query: 927 FGDFGLWDISKRIIVSRFSAPHNCVYQFVPVGLFSWKRGP--SASLYIEEKIKGIMAATE 754
FG+F LWDIS+RI++SRF+ P +++F+P+ LFS++ S++ ++ I IMAAT+
Sbjct: 975 FGEFSLWDISQRILISRFAMPSISIFEFIPISLFSFQSEVPLSSNPDVDLHINKIMAATK 1034
Query: 753 QCFSGVCENLDILSFNGEDIAVWLLISAACDSEDQYDHQENSLVMSADGSALDGSWRLAF 574
FS EN L GE IAVWLL+S DS+ Q+D+Q N + G WRLA
Sbjct: 1035 MWFSKHNENYTFLPLGGESIAVWLLVSTLSDSDTQHDNQMNDCQTNPVGW-----WRLAL 1089
Query: 573 LVDNMVVSGSALDPRASFADAFEGCGFIGTHDGLIYNWELSTGLKLADLHHFKSGHVSCM 394
LV NMV+ GSALDPRA+ A G G IGTHDGL+Y WELSTG KL LH+FK G VSC+
Sbjct: 1090 LVKNMVILGSALDPRAAAIGASAGHGIIGTHDGLVYMWELSTGTKLGSLHYFKGG-VSCI 1148
Query: 393 SV-DSKSGVLTVAGDENQLLLY 331
+ DS+S V VAGD QLL+Y
Sbjct: 1149 ATDDSRSDVFAVAGDGGQLLVY 1170
>ref|XP_002273558.1| PREDICTED: uncharacterized protein LOC100268093 [Vitis vinifera]
Length = 1242
Score = 186 bits (473), Expect = 5e-45
Identities = 103/202 (50%), Positives = 133/202 (65%), Gaps = 3/202 (1%)
Frame = -2
Query: 927 FGDFGLWDISKRIIVSRFSAPHNCVYQFVPVGLFSWKRGP--SASLYIEEKIKGIMAATE 754
FG+F LWDIS+RI++SRF+ P +++F+P+ LFS++ S++ ++ I IMAAT+
Sbjct: 1040 FGEFSLWDISQRILISRFAMPSISIFEFIPISLFSFQSEVPLSSNPDVDLHINKIMAATK 1099
Query: 753 QCFSGVCENLDILSFNGEDIAVWLLISAACDSEDQYDHQENSLVMSADGSALDGSWRLAF 574
FS EN L GE IAVWLL+S DS+ Q+D+Q N + G WRLA
Sbjct: 1100 MWFSKHNENYTFLPLGGESIAVWLLVSTLSDSDTQHDNQMNDCQTNPVGW-----WRLAL 1154
Query: 573 LVDNMVVSGSALDPRASFADAFEGCGFIGTHDGLIYNWELSTGLKLADLHHFKSGHVSCM 394
LV NMV+ GSALDPRA+ A G G IGTHDGL+Y WELSTG KL LH+FK G VSC+
Sbjct: 1155 LVKNMVILGSALDPRAAAIGASAGHGIIGTHDGLVYMWELSTGTKLGSLHYFKGG-VSCI 1213
Query: 393 SV-DSKSGVLTVAGDENQLLLY 331
+ DS+S V VAGD QLL+Y
Sbjct: 1214 ATDDSRSDVFAVAGDGGQLLVY 1235
>ref|XP_002312290.1| predicted protein [Populus trichocarpa] gi|222852110|gb|EEE89657.1|
predicted protein [Populus trichocarpa]
Length = 1312
Score = 169 bits (427), Expect = 1e-39
Identities = 90/204 (44%), Positives = 128/204 (62%), Gaps = 3/204 (1%)
Frame = -2
Query: 927 FGDFGLWDISKRIIVSRFSAPHNCVYQFVPVGLFSWKRGPSASLY--IEEKIKGIMAATE 754
FG+F +WD+S+R+ ++R S+P QF P+ F+W+R Y +EE+I GI+ AT+
Sbjct: 1111 FGEFTVWDVSRRMFMARVSSPSASACQFFPISSFTWQRVVHGFHYSTVEEQIDGIVDATK 1170
Query: 753 QCFSGVCENLDILSFNGEDIAVWLLISAACDSEDQYDHQENSLVMSADGSALDGSWRLAF 574
FS E + +GEDIA+WLL+S + + Q D+ + S G G WRLA
Sbjct: 1171 LWFSENSEYYSLPPLDGEDIAIWLLVSTIPELDTQEDY-----ISSDCGINPVGWWRLAL 1225
Query: 573 LVDNMVVSGSALDPRASFADAFEGCGFIGTHDGLIYNWELSTGLKLADLHHFKSGHVSCM 394
LV NM++ G ALDPRA+ + G G IGT DGL+Y WE +TG +L LHHF+ VSC+
Sbjct: 1226 LVKNMLILGKALDPRAAAIGSSSGNGIIGTFDGLVYMWEFTTGTRLGTLHHFEGESVSCI 1285
Query: 393 SVD-SKSGVLTVAGDENQLLLYAK 325
+ D SK GV++VAGD+ QLL+Y +
Sbjct: 1286 ATDNSKPGVISVAGDKGQLLVYRR 1309
>ref|XP_002512056.1| conserved hypothetical protein [Ricinus communis]
gi|223549236|gb|EEF50725.1| conserved hypothetical
protein [Ricinus communis]
Length = 1246
Score = 159 bits (402), Expect = 9e-37
Identities = 92/199 (46%), Positives = 121/199 (60%), Gaps = 3/199 (1%)
Frame = -2
Query: 927 FGDFGLWDISKRIIVSRFSAPHNCVYQFVPVGLFSWKRGPSASLY--IEEKIKGIMAATE 754
FG+F LWDISKRI VS+FS+P N V+QF P+ LF W+R Y +E + +M AT+
Sbjct: 974 FGEFTLWDISKRIFVSKFSSPSNSVHQFSPISLFHWQREVHGLSYSNVEAHVNRLMDATK 1033
Query: 753 QCFSGVCENLDILSFNGEDIAVWLLISAACDSEDQYDHQENSLVMSADGSALDGSWRLAF 574
FSG N S EDIA+W L+S A DS+ +D+ + ++ G WRLA
Sbjct: 1034 M-FSGHSINH---SLPHEDIAIWFLVSTAPDSDALHDYGSSHSQINPVGY-----WRLAL 1084
Query: 573 LVDNMVVSGSALDPRASFADAFEGCGFIGTHDGLIYNWELSTGLKLADLHHFKSGHVSCM 394
L+ N ++ GSALDPRA+ G G IGT DGL+Y WEL TG KL LH FK G SC+
Sbjct: 1085 LMKNSLILGSALDPRAAAIGTSAGHGIIGTLDGLVYMWELLTGKKLGTLHKFKGGSASCI 1144
Query: 393 SV-DSKSGVLTVAGDENQL 340
+ DS SGVL +A D+ ++
Sbjct: 1145 ATDDSGSGVLAIADDKGEI 1163
>gb|AAF98582.1|AC013427_25 This gene may be cut off [Arabidopsis thaliana]
Length = 554
Score = 154 bits (389), Expect = 3e-35
Identities = 83/198 (41%), Positives = 116/198 (58%)
Frame = -2
Query: 924 GDFGLWDISKRIIVSRFSAPHNCVYQFVPVGLFSWKRGPSASLYIEEKIKGIMAATEQCF 745
G+F +WDISKR +VSRF +P N +++F+P LF+W S S IE+ + I+AAT+ F
Sbjct: 364 GEFTIWDISKRSLVSRFVSPSNLIFEFIPTSLFAWHPVHSHST-IEDNVDMILAATKLWF 422
Query: 744 SGVCENLDILSFNGEDIAVWLLISAACDSEDQYDHQENSLVMSADGSALDGSWRLAFLVD 565
S N ++ +D A+WLL+S DS+ + D E+ + WRLA LV
Sbjct: 423 SKGVNNKTLVPAEVKDTAIWLLVSTDLDSDAKCDRVESPV----------RCWRLALLVK 472
Query: 564 NMVVSGSALDPRASFADAFEGCGFIGTHDGLIYNWELSTGLKLADLHHFKSGHVSCMSVD 385
+ ++ GS LDPRA A G G GT DGL+Y W+LSTG KL LH FK VSC+S D
Sbjct: 473 DQLILGSQLDPRADVAGTISGHGVAGTLDGLVYMWDLSTGTKLGSLHDFKGQRVSCISTD 532
Query: 384 SKSGVLTVAGDENQLLLY 331
+ +A ++ QLL+Y
Sbjct: 533 DSRNI-CIASEDGQLLVY 549