BLASTX nr result

ID: Coptis25_contig00023517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023517
         (949 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC65519.1| ferredoxin, partial [Dimocarpus longan]                377   e-102
ref|XP_002519228.1| conserved hypothetical protein [Ricinus comm...   372   e-101
ref|XP_003533161.1| PREDICTED: uncharacterized protein LOC100804...   369   e-100
ref|XP_003533162.1| PREDICTED: uncharacterized protein LOC100804...   369   e-100
ref|XP_002314947.1| predicted protein [Populus trichocarpa] gi|2...   367   2e-99

>gb|AGC65519.1| ferredoxin, partial [Dimocarpus longan]
          Length = 311

 Score =  377 bits (968), Expect = e-102
 Identities = 178/261 (68%), Positives = 212/261 (81%), Gaps = 1/261 (0%)
 Frame = +2

Query: 170 VKARSRSLEAVKNLLTSVGITSITTSPHLSLHNGNWVKLICGASFEDVVDVRNLSLVYTL 349
           +K  ++ L+ VK+L+T+VG+ S+ TSP  SL  GNWVKLICGASFEDVVD+RNLSLVYTL
Sbjct: 20  IKNNNKCLQNVKSLVTAVGVPSLATSPDESLQKGNWVKLICGASFEDVVDIRNLSLVYTL 79

Query: 350 AGVDCIDCXXXXXXXXXXNEGIGMARGIVSIRRPWVMISVNDDEDLHFRKAEFDPEDCPL 529
           AGVDCIDC          N+G+  AR IV IRRPW+MISVNDDEDLHFRKAEFDPEDCPL
Sbjct: 80  AGVDCIDCAADASVVSAVNQGVEAARAIVPIRRPWIMISVNDDEDLHFRKAEFDPEDCPL 139

Query: 530 DCARPCERVCPANAISLSSRDSGAQ-KTFEGGVIVERCYGCGRCFPVCPYDKIREVTYVR 706
           DC+RPCE+VCPA+AI L  + S       +GGVI ERCYGCGRCFPVCPYDKI  VTYVR
Sbjct: 140 DCSRPCEKVCPADAILLEEKKSADMLGESKGGVITERCYGCGRCFPVCPYDKISFVTYVR 199

Query: 707 DATATSELLKRNDVDAVEIHTSGRQSHMFRELWNRLEDSIGHVNLVAVSLPDLGDSTVSS 886
           DA AT+EL++RNDVDA+EIHTSGRQ+ +F ELW+ L DS+ ++ LVAVSLP++G++T+SS
Sbjct: 200 DANATAELIRRNDVDAIEIHTSGRQTTIFEELWDGLGDSVRYLRLVAVSLPNIGETTISS 259

Query: 887 MNMMYSIMEPHLHCYNLWQLD 949
           M  MYSIMEP LH +NLWQLD
Sbjct: 260 MKKMYSIMEPRLHGFNLWQLD 280


>ref|XP_002519228.1| conserved hypothetical protein [Ricinus communis]
           gi|223541543|gb|EEF43092.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 421

 Score =  372 bits (955), Expect = e-101
 Identities = 193/293 (65%), Positives = 220/293 (75%), Gaps = 9/293 (3%)
 Frame = +2

Query: 98  MALSLFPCNASLLXXXXXXXXXXGVKAR-SRSLEAVKNLLTSVGITSITTSPHLSLHNGN 274
           MALS F  NA++L           V+ R +R LE VK+L+  + + SI ++P  SL  GN
Sbjct: 1   MALS-FSINATILPQRLQGK----VRDRGNRGLEIVKHLVEKIEVPSIVSAPQESLRKGN 55

Query: 275 WVKLICGASFEDVVDVRNLSLVYTLAGVDCIDCXXXXXXXXXXNEGIGMARGIVSIRRPW 454
           WVKLICGASFED VD+RNLSLVYTLAGVDCIDC          NEGI  AR IV+IRRPW
Sbjct: 56  WVKLICGASFEDAVDIRNLSLVYTLAGVDCIDCAADESVVSAVNEGIEAAREIVNIRRPW 115

Query: 455 VMISVNDDEDLHFRKAEFDPEDCPLDCARPCERVCPANAISLSSRDSGAQKTF------- 613
           VMISVNDDEDLHFRKAEFDPEDCPLDC RPCE VCPANAISL    S A+ ++       
Sbjct: 116 VMISVNDDEDLHFRKAEFDPEDCPLDCLRPCENVCPANAISLEEVGSRAEFSYGTDMLNA 175

Query: 614 -EGGVIVERCYGCGRCFPVCPYDKIREVTYVRDATATSELLKRNDVDAVEIHTSGRQSHM 790
            +GGVI ERCYGCGRCFPVCPYDKI+ VTYVRDATAT+ELL+RNDVDA+EIHTSGRQ   
Sbjct: 176 LKGGVITERCYGCGRCFPVCPYDKIKVVTYVRDATATAELLERNDVDAIEIHTSGRQMAP 235

Query: 791 FRELWNRLEDSIGHVNLVAVSLPDLGDSTVSSMNMMYSIMEPHLHCYNLWQLD 949
           F++LW+ L +S+  + LVAVSLP  GDSTVSSMN MYS MEP L+C NLWQLD
Sbjct: 236 FKKLWDGLGNSLRFLKLVAVSLPYSGDSTVSSMNTMYSAMEPQLNCLNLWQLD 288


>ref|XP_003533161.1| PREDICTED: uncharacterized protein LOC100804088 isoform 1 [Glycine
           max]
          Length = 445

 Score =  369 bits (947), Expect = e-100
 Identities = 176/259 (67%), Positives = 211/259 (81%), Gaps = 7/259 (2%)
 Frame = +2

Query: 194 EAVKNLLTSVGITSITTSPHLSLHNGNWVKLICGASFEDVVDVRNLSLVYTLAGVDCIDC 373
           E VK+L+++V + SI+++P  SLH GNWVKLICGASFEDVVD+RNLSLVYTLAGVDCIDC
Sbjct: 54  ENVKSLVSTVVLPSISSTPLESLHRGNWVKLICGASFEDVVDIRNLSLVYTLAGVDCIDC 113

Query: 374 XXXXXXXXXXNEGIGMARGIVSIRRPWVMISVNDDEDLHFRKAEFDPEDCPLDCARPCER 553
                     NEGI  AR IV +RRPWVMISVNDD+DLHFRKAEFDPEDCP DC+RPCE 
Sbjct: 114 AADASVLSAVNEGIEAARDIVCLRRPWVMISVNDDKDLHFRKAEFDPEDCPADCSRPCEN 173

Query: 554 VCPANAI-------SLSSRDSGAQKTFEGGVIVERCYGCGRCFPVCPYDKIREVTYVRDA 712
           VCPANAI       S+ S ++ A +  + GVI ERCYGCGRC PVCPYDKIREVTYVRDA
Sbjct: 174 VCPANAITFQGKSTSVISHNTEAPRVLKDGVITERCYGCGRCLPVCPYDKIREVTYVRDA 233

Query: 713 TATSELLKRNDVDAVEIHTSGRQSHMFRELWNRLEDSIGHVNLVAVSLPDLGDSTVSSMN 892
             T++L+KRNDVDA+EIHTSGRQS +F+ELW+ L +S+G++ L+AVSLP+ GDST+SSMN
Sbjct: 234 ITTADLIKRNDVDAMEIHTSGRQSTLFKELWSALGESVGYLKLIAVSLPNGGDSTISSMN 293

Query: 893 MMYSIMEPHLHCYNLWQLD 949
            M+SIM+P+L  +NLWQLD
Sbjct: 294 KMFSIMKPNLQSFNLWQLD 312


>ref|XP_003533162.1| PREDICTED: uncharacterized protein LOC100804088 isoform 2 [Glycine
           max]
          Length = 439

 Score =  369 bits (946), Expect = e-100
 Identities = 174/253 (68%), Positives = 207/253 (81%), Gaps = 1/253 (0%)
 Frame = +2

Query: 194 EAVKNLLTSVGITSITTSPHLSLHNGNWVKLICGASFEDVVDVRNLSLVYTLAGVDCIDC 373
           E VK+L+++V + SI+++P  SLH GNWVKLICGASFEDVVD+RNLSLVYTLAGVDCIDC
Sbjct: 54  ENVKSLVSTVVLPSISSTPLESLHRGNWVKLICGASFEDVVDIRNLSLVYTLAGVDCIDC 113

Query: 374 XXXXXXXXXXNEGIGMARGIVSIRRPWVMISVNDDEDLHFRKAEFDPEDCPLDCARPCER 553
                     NEGI  AR IV +RRPWVMISVNDD+DLHFRKAEFDPEDCP DC+RPCE 
Sbjct: 114 AADASVLSAVNEGIEAARDIVCLRRPWVMISVNDDKDLHFRKAEFDPEDCPADCSRPCEN 173

Query: 554 VCPANAISLSSRDSGA-QKTFEGGVIVERCYGCGRCFPVCPYDKIREVTYVRDATATSEL 730
           VCPANAI+   + +       E GVI ERCYGCGRC PVCPYDKIREVTYVRDA  T++L
Sbjct: 174 VCPANAITFQGKSTSVISHNTEDGVITERCYGCGRCLPVCPYDKIREVTYVRDAITTADL 233

Query: 731 LKRNDVDAVEIHTSGRQSHMFRELWNRLEDSIGHVNLVAVSLPDLGDSTVSSMNMMYSIM 910
           +KRNDVDA+EIHTSGRQS +F+ELW+ L +S+G++ L+AVSLP+ GDST+SSMN M+SIM
Sbjct: 234 IKRNDVDAMEIHTSGRQSTLFKELWSALGESVGYLKLIAVSLPNGGDSTISSMNKMFSIM 293

Query: 911 EPHLHCYNLWQLD 949
           +P+L  +NLWQLD
Sbjct: 294 KPNLQSFNLWQLD 306


>ref|XP_002314947.1| predicted protein [Populus trichocarpa] gi|222863987|gb|EEF01118.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score =  367 bits (943), Expect = 2e-99
 Identities = 175/267 (65%), Positives = 204/267 (76%), Gaps = 8/267 (2%)
 Frame = +2

Query: 173 KARSRSLEAVKNLLTSVGITSITTSPHLSLHNGNWVKLICGASFEDVVDVRNLSLVYTLA 352
           ++  + LE+V+NL+ + G+ S+ ++P  SL  GNWVKLICGASFEDVVDVRNLSLVYTLA
Sbjct: 27  RSNKKCLESVRNLVKTTGVASVVSAPQESLQKGNWVKLICGASFEDVVDVRNLSLVYTLA 86

Query: 353 GVDCIDCXXXXXXXXXXNEGIGMARGIVSIRRPWVMISVNDDEDLHFRKAEFDPEDCPLD 532
           GVDCIDC          NEGI  AR IV +R+PWVMISVNDDEDLHFRKAEFDPE+CPLD
Sbjct: 87  GVDCIDCAADASIVNAVNEGIEAAREIVYLRKPWVMISVNDDEDLHFRKAEFDPEECPLD 146

Query: 533 CARPCERVCPANAISLSSRDSGAQ--------KTFEGGVIVERCYGCGRCFPVCPYDKIR 688
           C+RPCE +CPA+AISL    S  +           +GGVI ERCYGCGRCFPVCPYDKIR
Sbjct: 147 CSRPCETICPASAISLQQHQSTTELSHGTETLNVLKGGVITERCYGCGRCFPVCPYDKIR 206

Query: 689 EVTYVRDATATSELLKRNDVDAVEIHTSGRQSHMFRELWNRLEDSIGHVNLVAVSLPDLG 868
              Y RDA AT+ELLKRNDVDA+EIHT GRQ+  F  LWN L +S G++ LVAVSLP  G
Sbjct: 207 MAMYTRDAAATAELLKRNDVDAIEIHTGGRQTAPFEGLWNDLGNSTGYLKLVAVSLPYAG 266

Query: 869 DSTVSSMNMMYSIMEPHLHCYNLWQLD 949
           DST+SSMN +Y++MEPHL C NLWQLD
Sbjct: 267 DSTISSMNTIYTMMEPHLPCLNLWQLD 293


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