BLASTX nr result

ID: Coptis25_contig00023513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023513
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325440.1| predicted protein [Populus trichocarpa] gi|2...   151   2e-34
ref|XP_002276082.1| PREDICTED: uncharacterized protein LOC100241...   148   2e-33
ref|XP_004144653.1| PREDICTED: uncharacterized protein LOC101220...   146   8e-33
ref|XP_002319192.1| predicted protein [Populus trichocarpa] gi|2...   141   2e-31
ref|NP_001237742.1| uncharacterized protein LOC100306113 [Glycin...   140   3e-31

>ref|XP_002325440.1| predicted protein [Populus trichocarpa] gi|222862315|gb|EEE99821.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  151 bits (381), Expect = 2e-34
 Identities = 78/134 (58%), Positives = 90/134 (67%), Gaps = 2/134 (1%)
 Frame = +2

Query: 230 FQLKEREPIIKINAIFCKSSVSHLKLNGARQALVGDMHRSRSGDNSSFCYDKXXXXXXXX 409
           FQ      I KI+AI    SV     +    + +GD+HR RS   S FCYDK        
Sbjct: 37  FQFSGNGCITKISAITPNGSVFPSASSHGESSSMGDVHRRRSSLESLFCYDKPIPEERIE 96

Query: 410 XXV--ALSEKSIGDNPRCSVCEAKGAVLCLTCTGSGLYIDSIMESQGITVKVRCLGCGGT 583
             V  +L+ K IGDNPRC+ C+AKGAVLC TC+GSGLY+DSIMESQGI VKVRCLGCGGT
Sbjct: 97  EPVGVSLAAKVIGDNPRCTDCQAKGAVLCTTCSGSGLYVDSIMESQGIIVKVRCLGCGGT 156

Query: 584 GNIMCSKCGGWGHL 625
           GNIMCS+CGG GHL
Sbjct: 157 GNIMCSECGGLGHL 170


>ref|XP_002276082.1| PREDICTED: uncharacterized protein LOC100241525 [Vitis vinifera]
           gi|296085904|emb|CBI31228.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  148 bits (373), Expect = 2e-33
 Identities = 74/116 (63%), Positives = 83/116 (71%), Gaps = 2/116 (1%)
 Frame = +2

Query: 284 SSVSHLKLNGARQALVGDMHRSRSGDNSSFCYDKXXXXXXXXXXVALS--EKSIGDNPRC 457
           +SVS      A  + VGD+HR RS   S FCYDK          + LS  EK IGDNPRC
Sbjct: 42  ASVSCSASRRAESSSVGDVHRRRSSLESLFCYDKPIPEEIIEKPIGLSLAEKVIGDNPRC 101

Query: 458 SVCEAKGAVLCLTCTGSGLYIDSIMESQGITVKVRCLGCGGTGNIMCSKCGGWGHL 625
             C+AKGAVLC TC+GSGLY+DSI+ESQGI VKVRCLGCGGTGNIMCS+CGG GHL
Sbjct: 102 IDCQAKGAVLCATCSGSGLYVDSILESQGIIVKVRCLGCGGTGNIMCSECGGRGHL 157


>ref|XP_004144653.1| PREDICTED: uncharacterized protein LOC101220837 [Cucumis sativus]
          Length = 161

 Score =  146 bits (368), Expect = 8e-33
 Identities = 73/130 (56%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
 Frame = +2

Query: 242 EREPIIKINAIFCKSSVSHLKLNGARQALVGDMHRSRSGDNSSFCYDKXXXXXXXXXXVA 421
           +R    KI+A++   S S     G   +   D+HR RS   S FCYDK          + 
Sbjct: 34  KRNKFSKISALYPNGSAS-----GQGDSSAADVHRRRSSFESLFCYDKAIPEERIETPIG 88

Query: 422 LS--EKSIGDNPRCSVCEAKGAVLCLTCTGSGLYIDSIMESQGITVKVRCLGCGGTGNIM 595
           +S  EK IG+NPRC+ C+AKGAVLC TC+GSGLY+DSI+ESQGI VKVRCLGCGGTGNIM
Sbjct: 89  ISLAEKMIGNNPRCTDCQAKGAVLCATCSGSGLYVDSILESQGIIVKVRCLGCGGTGNIM 148

Query: 596 CSKCGGWGHL 625
           CS+CGG GHL
Sbjct: 149 CSECGGRGHL 158


>ref|XP_002319192.1| predicted protein [Populus trichocarpa] gi|222857568|gb|EEE95115.1|
           predicted protein [Populus trichocarpa]
          Length = 111

 Score =  141 bits (356), Expect = 2e-31
 Identities = 68/101 (67%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
 Frame = +2

Query: 329 VGDMHRSRSGDNSSFCYDKXXXXXXXXXXVALS--EKSIGDNPRCSVCEAKGAVLCLTCT 502
           VGD+HR RS   S+F YDK          V +S  EK IGDNPRC+ C+AKGAVLC TC 
Sbjct: 8   VGDVHRRRSSLESTFRYDKPIPEERIEEPVGISLAEKVIGDNPRCTDCQAKGAVLCTTCA 67

Query: 503 GSGLYIDSIMESQGITVKVRCLGCGGTGNIMCSKCGGWGHL 625
           GSGLY+DSI+ESQGI VKVRCLGCGGTGNIMCS+CGG GH+
Sbjct: 68  GSGLYVDSILESQGIIVKVRCLGCGGTGNIMCSECGGRGHV 108


>ref|NP_001237742.1| uncharacterized protein LOC100306113 [Glycine max]
           gi|255627587|gb|ACU14138.1| unknown [Glycine max]
          Length = 172

 Score =  140 bits (354), Expect = 3e-31
 Identities = 73/126 (57%), Positives = 86/126 (68%), Gaps = 2/126 (1%)
 Frame = +2

Query: 254 IIKINAIFCKSSVSHLKLNGARQALVGDMHRSRSGDNSSFCYDKXXXXXXXXXXVALS-- 427
           + KI+AI    SVS      +  +L  D ++ RS   S FCYDK          V LS  
Sbjct: 44  VTKIHAIPPNGSVSICSSRVSVSSLKADENKRRSNLESLFCYDKAIPEEIIEKPVGLSLE 103

Query: 428 EKSIGDNPRCSVCEAKGAVLCLTCTGSGLYIDSIMESQGITVKVRCLGCGGTGNIMCSKC 607
           EK+IG+N RC+ C+AKGAVLC TC GSGLY+DSIMESQGI VKVRCLGCGGTGNIMC++C
Sbjct: 104 EKAIGNNTRCTDCQAKGAVLCATCAGSGLYVDSIMESQGIIVKVRCLGCGGTGNIMCAEC 163

Query: 608 GGWGHL 625
           GG GHL
Sbjct: 164 GGRGHL 169


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