BLASTX nr result

ID: Coptis25_contig00023506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023506
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35745.3| unnamed protein product [Vitis vinifera]               71   1e-10
ref|XP_002320007.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_003517358.1| PREDICTED: uncharacterized protein LOC100780...    57   2e-06
gb|ACU20185.1| unknown [Glycine max]                                   57   2e-06
ref|XP_003539258.1| PREDICTED: uncharacterized protein LOC100813...    57   2e-06

>emb|CBI35745.3| unnamed protein product [Vitis vinifera]
          Length = 2817

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
 Frame = +3

Query: 9    SSSKFLDPNYEEDGDEWLEDESSEVMGSFNQNSIPLGNXXXXXXXXXXXXXXXXXTPTSS 188
            SSS+ LD  YE+DGD+WL++ESSE++G+  + ++PL N                  PTS 
Sbjct: 2643 SSSRILDEKYEDDGDDWLKEESSEIVGA-GRATMPLVN--EEDVSFSDLEEDDGDAPTSY 2699

Query: 189  KAVTV--DSSKKESRDWVQLEKSSSNSRRD 272
            K VT   DSS K+SRDWVQL  SS++S +D
Sbjct: 2700 KKVTYGSDSSTKDSRDWVQLSSSSADSAKD 2729


>ref|XP_002320007.1| predicted protein [Populus trichocarpa] gi|222860780|gb|EEE98322.1|
           predicted protein [Populus trichocarpa]
          Length = 506

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/89 (35%), Positives = 51/89 (57%)
 Frame = +3

Query: 6   NSSSKFLDPNYEEDGDEWLEDESSEVMGSFNQNSIPLGNXXXXXXXXXXXXXXXXXTPTS 185
           +SSS  L+  +++DGD+WL+D+SSE++G  + +S+PLGN                     
Sbjct: 383 SSSSGILEEKFDDDGDDWLKDDSSEMIG-VSGSSMPLGNDEDVSFSDLEEDDGDEPASYK 441

Query: 186 SKAVTVDSSKKESRDWVQLEKSSSNSRRD 272
             A   D + K S+DWVQL +SS++S +D
Sbjct: 442 KVASGSDCATKGSQDWVQLSRSSADSVKD 470


>ref|XP_003517358.1| PREDICTED: uncharacterized protein LOC100780902 [Glycine max]
          Length = 466

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/88 (34%), Positives = 44/88 (50%)
 Frame = +3

Query: 9   SSSKFLDPNYEEDGDEWLEDESSEVMGSFNQNSIPLGNXXXXXXXXXXXXXXXXXTPTSS 188
           S+++FLD  Y++D D+WL++E +  M   +  S+  GN                      
Sbjct: 343 STNRFLDETYDDDADDWLKEEDTSEMVGPSGTSVHTGNDEDVSFSDLEEDDGDVHESYKK 402

Query: 189 KAVTVDSSKKESRDWVQLEKSSSNSRRD 272
                DSS K+SRDWVQL +SS NS +D
Sbjct: 403 TRSGSDSSTKDSRDWVQLGRSSPNSDKD 430


>gb|ACU20185.1| unknown [Glycine max]
          Length = 340

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/88 (34%), Positives = 44/88 (50%)
 Frame = +3

Query: 9   SSSKFLDPNYEEDGDEWLEDESSEVMGSFNQNSIPLGNXXXXXXXXXXXXXXXXXTPTSS 188
           S+++FLD  Y++D D+WL++E +  M   +  S+  GN                      
Sbjct: 217 STNRFLDETYDDDADDWLKEEDTSEMVGPSGTSVHTGNDEDVSFSDLEEDDGDVHESYKK 276

Query: 189 KAVTVDSSKKESRDWVQLEKSSSNSRRD 272
                DSS K+SRDWVQL +SS NS +D
Sbjct: 277 TRSGSDSSTKDSRDWVQLGRSSPNSDKD 304


>ref|XP_003539258.1| PREDICTED: uncharacterized protein LOC100813259 [Glycine max]
          Length = 475

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/88 (34%), Positives = 44/88 (50%)
 Frame = +3

Query: 9   SSSKFLDPNYEEDGDEWLEDESSEVMGSFNQNSIPLGNXXXXXXXXXXXXXXXXXTPTSS 188
           S+++FLD +YE+D D+WL++E +  M   +   +  GN                      
Sbjct: 352 STNRFLDESYEDDADDWLKEEDTSEMVGPSGTPVHTGNDEDVSFSDLEEDDGDVHESYKK 411

Query: 189 KAVTVDSSKKESRDWVQLEKSSSNSRRD 272
                DSS K+SRDWVQL +SS NS +D
Sbjct: 412 TRSGSDSSTKDSRDWVQLGRSSPNSDKD 439


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