BLASTX nr result
ID: Coptis25_contig00023506
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00023506 (272 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI35745.3| unnamed protein product [Vitis vinifera] 71 1e-10 ref|XP_002320007.1| predicted protein [Populus trichocarpa] gi|2... 60 2e-07 ref|XP_003517358.1| PREDICTED: uncharacterized protein LOC100780... 57 2e-06 gb|ACU20185.1| unknown [Glycine max] 57 2e-06 ref|XP_003539258.1| PREDICTED: uncharacterized protein LOC100813... 57 2e-06 >emb|CBI35745.3| unnamed protein product [Vitis vinifera] Length = 2817 Score = 70.9 bits (172), Expect = 1e-10 Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 2/90 (2%) Frame = +3 Query: 9 SSSKFLDPNYEEDGDEWLEDESSEVMGSFNQNSIPLGNXXXXXXXXXXXXXXXXXTPTSS 188 SSS+ LD YE+DGD+WL++ESSE++G+ + ++PL N PTS Sbjct: 2643 SSSRILDEKYEDDGDDWLKEESSEIVGA-GRATMPLVN--EEDVSFSDLEEDDGDAPTSY 2699 Query: 189 KAVTV--DSSKKESRDWVQLEKSSSNSRRD 272 K VT DSS K+SRDWVQL SS++S +D Sbjct: 2700 KKVTYGSDSSTKDSRDWVQLSSSSADSAKD 2729 >ref|XP_002320007.1| predicted protein [Populus trichocarpa] gi|222860780|gb|EEE98322.1| predicted protein [Populus trichocarpa] Length = 506 Score = 59.7 bits (143), Expect = 2e-07 Identities = 32/89 (35%), Positives = 51/89 (57%) Frame = +3 Query: 6 NSSSKFLDPNYEEDGDEWLEDESSEVMGSFNQNSIPLGNXXXXXXXXXXXXXXXXXTPTS 185 +SSS L+ +++DGD+WL+D+SSE++G + +S+PLGN Sbjct: 383 SSSSGILEEKFDDDGDDWLKDDSSEMIG-VSGSSMPLGNDEDVSFSDLEEDDGDEPASYK 441 Query: 186 SKAVTVDSSKKESRDWVQLEKSSSNSRRD 272 A D + K S+DWVQL +SS++S +D Sbjct: 442 KVASGSDCATKGSQDWVQLSRSSADSVKD 470 >ref|XP_003517358.1| PREDICTED: uncharacterized protein LOC100780902 [Glycine max] Length = 466 Score = 57.0 bits (136), Expect = 2e-06 Identities = 30/88 (34%), Positives = 44/88 (50%) Frame = +3 Query: 9 SSSKFLDPNYEEDGDEWLEDESSEVMGSFNQNSIPLGNXXXXXXXXXXXXXXXXXTPTSS 188 S+++FLD Y++D D+WL++E + M + S+ GN Sbjct: 343 STNRFLDETYDDDADDWLKEEDTSEMVGPSGTSVHTGNDEDVSFSDLEEDDGDVHESYKK 402 Query: 189 KAVTVDSSKKESRDWVQLEKSSSNSRRD 272 DSS K+SRDWVQL +SS NS +D Sbjct: 403 TRSGSDSSTKDSRDWVQLGRSSPNSDKD 430 >gb|ACU20185.1| unknown [Glycine max] Length = 340 Score = 57.0 bits (136), Expect = 2e-06 Identities = 30/88 (34%), Positives = 44/88 (50%) Frame = +3 Query: 9 SSSKFLDPNYEEDGDEWLEDESSEVMGSFNQNSIPLGNXXXXXXXXXXXXXXXXXTPTSS 188 S+++FLD Y++D D+WL++E + M + S+ GN Sbjct: 217 STNRFLDETYDDDADDWLKEEDTSEMVGPSGTSVHTGNDEDVSFSDLEEDDGDVHESYKK 276 Query: 189 KAVTVDSSKKESRDWVQLEKSSSNSRRD 272 DSS K+SRDWVQL +SS NS +D Sbjct: 277 TRSGSDSSTKDSRDWVQLGRSSPNSDKD 304 >ref|XP_003539258.1| PREDICTED: uncharacterized protein LOC100813259 [Glycine max] Length = 475 Score = 56.6 bits (135), Expect = 2e-06 Identities = 30/88 (34%), Positives = 44/88 (50%) Frame = +3 Query: 9 SSSKFLDPNYEEDGDEWLEDESSEVMGSFNQNSIPLGNXXXXXXXXXXXXXXXXXTPTSS 188 S+++FLD +YE+D D+WL++E + M + + GN Sbjct: 352 STNRFLDESYEDDADDWLKEEDTSEMVGPSGTPVHTGNDEDVSFSDLEEDDGDVHESYKK 411 Query: 189 KAVTVDSSKKESRDWVQLEKSSSNSRRD 272 DSS K+SRDWVQL +SS NS +D Sbjct: 412 TRSGSDSSTKDSRDWVQLGRSSPNSDKD 439