BLASTX nr result

ID: Coptis25_contig00023505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023505
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314877.1| predicted protein [Populus trichocarpa] gi|1...    78   2e-16
ref|XP_002332045.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-15
emb|CBI15438.3| unnamed protein product [Vitis vinifera]               76   3e-15
ref|XP_002276180.1| PREDICTED: serine/threonine-protein phosphat...    76   3e-15
ref|XP_003528942.1| PREDICTED: serine/threonine-protein phosphat...    77   9e-15

>ref|XP_002314877.1| predicted protein [Populus trichocarpa] gi|118484366|gb|ABK94060.1|
           unknown [Populus trichocarpa]
           gi|222863917|gb|EEF01048.1| predicted protein [Populus
           trichocarpa]
          Length = 587

 Score = 78.2 bits (191), Expect(2) = 2e-16
 Identities = 40/49 (81%), Positives = 44/49 (89%)
 Frame = -1

Query: 451 NIKFKVAKVLQSLIRMVDQSVAKQMIHPCLVELSEVPDVDVRFFASQAL 305
           NIKF VAKVLQSLI +VDQSVA++ I PCLVELSE PDVDVRFFA+QAL
Sbjct: 529 NIKFNVAKVLQSLIPIVDQSVAEKTIRPCLVELSEDPDVDVRFFANQAL 577



 Score = 32.0 bits (71), Expect(2) = 2e-16
 Identities = 15/24 (62%), Positives = 20/24 (83%)
 Frame = -2

Query: 504 TCSKLLPIVINVSKYRV*ISNLRW 433
           TCSKLLP+V+N SK RV  SN+++
Sbjct: 511 TCSKLLPVVVNASKDRV--SNIKF 532


>ref|XP_002332045.1| predicted protein [Populus trichocarpa] gi|222875342|gb|EEF12473.1|
           predicted protein [Populus trichocarpa]
          Length = 587

 Score = 76.6 bits (187), Expect(2) = 2e-15
 Identities = 39/49 (79%), Positives = 43/49 (87%)
 Frame = -1

Query: 451 NIKFKVAKVLQSLIRMVDQSVAKQMIHPCLVELSEVPDVDVRFFASQAL 305
           NIKF VAKVLQSLI +VDQSV ++ I PCLVELSE PDVDVRFFA+QAL
Sbjct: 529 NIKFNVAKVLQSLIPIVDQSVVEKTIRPCLVELSEDPDVDVRFFATQAL 577



 Score = 30.4 bits (67), Expect(2) = 2e-15
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 504 TCSKLLPIVINVSKYRV 454
           TCS+LLPIVIN SK RV
Sbjct: 511 TCSQLLPIVINASKDRV 527


>emb|CBI15438.3| unnamed protein product [Vitis vinifera]
          Length = 642

 Score = 75.9 bits (185), Expect(2) = 3e-15
 Identities = 45/75 (60%), Positives = 48/75 (64%)
 Frame = -1

Query: 451 NIKFKVAKVLQSLIRMVDQSVAKQMIHPCLVELSEVPDVDVRFFASQALXXXXXXXXXXX 272
           NIKF VAKVLQSL  +VDQSV  + I PCLVELSE PDVDVRFFASQAL           
Sbjct: 584 NIKFNVAKVLQSLTPIVDQSVVDKTIRPCLVELSEDPDVDVRFFASQAL----------- 632

Query: 271 XXXXXXXXDQVMMSS 227
                   DQ+MMSS
Sbjct: 633 -----QASDQIMMSS 642



 Score = 30.4 bits (67), Expect(2) = 3e-15
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 504 TCSKLLPIVINVSKYRV 454
           TCSKLLP+VIN +K RV
Sbjct: 566 TCSKLLPVVINAAKDRV 582


>ref|XP_002276180.1| PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa
           regulatory subunit A beta isoform [Vitis vinifera]
          Length = 587

 Score = 75.9 bits (185), Expect(2) = 3e-15
 Identities = 45/75 (60%), Positives = 48/75 (64%)
 Frame = -1

Query: 451 NIKFKVAKVLQSLIRMVDQSVAKQMIHPCLVELSEVPDVDVRFFASQALXXXXXXXXXXX 272
           NIKF VAKVLQSL  +VDQSV  + I PCLVELSE PDVDVRFFASQAL           
Sbjct: 529 NIKFNVAKVLQSLTPIVDQSVVDKTIRPCLVELSEDPDVDVRFFASQAL----------- 577

Query: 271 XXXXXXXXDQVMMSS 227
                   DQ+MMSS
Sbjct: 578 -----QASDQIMMSS 587



 Score = 30.4 bits (67), Expect(2) = 3e-15
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 504 TCSKLLPIVINVSKYRV 454
           TCSKLLP+VIN +K RV
Sbjct: 511 TCSKLLPVVINAAKDRV 527


>ref|XP_003528942.1| PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa
           regulatory subunit A beta isoform-like [Glycine max]
          Length = 587

 Score = 77.4 bits (189), Expect(2) = 9e-15
 Identities = 40/49 (81%), Positives = 42/49 (85%)
 Frame = -1

Query: 451 NIKFKVAKVLQSLIRMVDQSVAKQMIHPCLVELSEVPDVDVRFFASQAL 305
           NIKF VAKVLQSLI +VDQSV +  I PCLVELSE PDVDVRFFASQAL
Sbjct: 529 NIKFNVAKVLQSLIPIVDQSVVESTIRPCLVELSEDPDVDVRFFASQAL 577



 Score = 27.3 bits (59), Expect(2) = 9e-15
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -2

Query: 504 TCSKLLPIVINVSKYRV 454
           T SKLLP+VIN SK RV
Sbjct: 511 TSSKLLPLVINASKDRV 527


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