BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023496
         (1548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_197167.1| pentatricopeptide repeat-containing protein [Ar...   160   8e-37
ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat...   156   1e-35
ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat...   154   6e-35
ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containi...   154   8e-35
ref|XP_003631093.1| Pentatricopeptide repeat-containing protein ...   152   3e-34

>ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
           gi|10176973|dbj|BAB10191.1| unnamed protein product
           [Arabidopsis thaliana] gi|110737318|dbj|BAF00605.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332004938|gb|AED92321.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  160 bits (405), Expect = 8e-37
 Identities = 81/239 (33%), Positives = 139/239 (58%), Gaps = 1/239 (0%)
 Frame = +2

Query: 2   KSEKIDLAMKLFDQTQEKGLILAVRSHTALIEGLCKSHNIATEKEVFHSLTETEVGPDTS 181
           KS+++D A+ L ++ ++ G+   V ++ +LI GLC S   +    +   +T+ E+ PD  
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257

Query: 182 TCNIIIHVICXXXXXXXXXXXXXXMVRRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSM 361
           T N +I                  M+RR + PD VTY+ ++Y   + +++    ++F  M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317

Query: 362 RNAGIVPTVVTYTVLIFGYCKCLKIDEAIELFHEMREKGLRPDVITYTILIDGLCKSGNL 541
            + G  P VVTY++LI GYCK  K++  ++LF EM ++G+  + +TYTILI G C++G L
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377

Query: 542 TAAKELFHSITEAGVEPNVVMYNVLIRGLCLGGLLAEANELHLEMEKKGINGDF-TYSL 715
             A+E+F  +   GV PN++ YNVL+ GLC  G + +A  +  +M+K G++ D  TY++
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNI 436



 Score =  117 bits (292), Expect = 1e-23
 Identities = 63/230 (27%), Positives = 120/230 (52%)
 Frame = +2

Query: 2   KSEKIDLAMKLFDQTQEKGLILAVRSHTALIEGLCKSHNIATEKEVFHSLTETEVGPDTS 181
           K  ++  A + +++   + L   + +++ LI GLC    +   +E+F  +      PD  
Sbjct: 268 KEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV 327

Query: 182 TCNIIIHVICXXXXXXXXXXXXXXMVRRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSM 361
           T +I+I+  C              M +R +  + VTYT ++  Y    K+    ++F  M
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387

Query: 362 RNAGIVPTVVTYTVLIFGYCKCLKIDEAIELFHEMREKGLRPDVITYTILIDGLCKSGNL 541
              G+ P ++TY VL+ G C   KI++A+ +  +M++ G+  D++TY I+I G+CK+G +
Sbjct: 388 VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEV 447

Query: 542 TAAKELFHSITEAGVEPNVVMYNVLIRGLCLGGLLAEANELHLEMEKKGI 691
             A +++ S+   G+ P++  Y  ++ GL   GL  EA+ L  +M++ GI
Sbjct: 448 ADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGI 497



 Score =  107 bits (267), Expect = 9e-21
 Identities = 62/236 (26%), Positives = 115/236 (48%), Gaps = 1/236 (0%)
 Frame = +2

Query: 11  KIDLAMKLFDQTQEKGLILAVRSHTALIEGLCKSHNIATEKEVFHSLTETEVGPDTSTCN 190
           K+D ++ LF    +   + ++   + L+  + K         ++  +    +  +  TCN
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 191 IIIHVICXXXXXXXXXXXXXXMVRRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSMRNA 370
           I+++  C              M++   +P  VT+ +++  +    ++   L +F+ M   
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180

Query: 371 GIVPTVVTYTVLIFGYCKCLKIDEAIELFHEMREKGLRPDVITYTILIDGLCKSGNLTAA 550
           G  P VV Y  +I G CK  ++D A++L + M + G+ PDV+TY  LI GLC SG  + A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240

Query: 551 KELFHSITEAGVEPNVVMYNVLIRGLCLGGLLAEANELHLEMEKKGINGDF-TYSL 715
             +   +T+  + P+V  +N LI      G ++EA E + EM ++ ++ D  TYSL
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296



 Score =  100 bits (249), Expect = 1e-18
 Identities = 68/278 (24%), Positives = 120/278 (43%), Gaps = 1/278 (0%)
 Frame = +2

Query: 2   KSEKIDLAMKLFDQTQEKGLILAVRSHTALIEGLCKSHNIATEKEVFHSLTETEVGPDTS 181
           +  ++ LA+    +  + G   ++ +  +L+ G C+   +     +F  +      P+  
Sbjct: 128 RCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVV 187

Query: 182 TCNIIIHVICXXXXXXXXXXXXXXMVRRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSM 361
             N II  +C              M +  I PD VTY +++       +     ++ + M
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCM 247

Query: 362 RNAGIVPTVVTYTVLIFGYCKCLKIDEAIELFHEMREKGLRPDVITYTILIDGLCKSGNL 541
               I P V T+  LI    K  ++ EA E + EM  + L PD++TY++LI GLC    L
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRL 307

Query: 542 TAAKELFHSITEAGVEPNVVMYNVLIRGLCLGGLLAEANELHLEMEKKG-INGDFTYSLQ 718
             A+E+F  +   G  P+VV Y++LI G C    +    +L  EM ++G +    TY++ 
Sbjct: 308 DEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTIL 367

Query: 719 FDSSTVLQKNDIFKACLHLREMAKCDFSPENSTEPMLV 832
                   K ++ +     R M  C   P   T  +L+
Sbjct: 368 IQGYCRAGKLNVAEEI--FRRMVFCGVHPNIITYNVLL 403



 Score = 99.0 bits (245), Expect = 3e-18
 Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 1/239 (0%)
 Frame = +2

Query: 2   KSEKIDLAMKLFDQTQEKGLILAVRSHTALIEGLCKSHNIATEKEVFHSLTETEVGPDTS 181
           K +K D+ + L++Q Q  G+   + +   L+   C+   ++        + +    P   
Sbjct: 93  KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIV 152

Query: 182 TCNIIIHVICXXXXXXXXXXXXXXMVRRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSM 361
           T   +++  C              MV    KP+ V Y  I+       ++   L + N M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212

Query: 362 RNAGIVPTVVTYTVLIFGYCKCLKIDEAIELFHEMREKGLRPDVITYTILIDGLCKSGNL 541
              GI P VVTY  LI G C   +  +A  +   M ++ + PDV T+  LID   K G +
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272

Query: 542 TAAKELFHSITEAGVEPNVVMYNVLIRGLCLGGLLAEANELHLEMEKKGINGD-FTYSL 715
           + A+E +  +    ++P++V Y++LI GLC+   L EA E+   M  KG   D  TYS+
Sbjct: 273 SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331



 Score = 91.7 bits (226), Expect = 5e-16
 Identities = 54/195 (27%), Positives = 96/195 (49%)
 Frame = +2

Query: 11  KIDLAMKLFDQTQEKGLILAVRSHTALIEGLCKSHNIATEKEVFHSLTETEVGPDTSTCN 190
           ++D A ++F     KG    V +++ LI G CKS  +    ++F  +++  V  +T T  
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365

Query: 191 IIIHVICXXXXXXXXXXXXXXMVRRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSMRNA 370
           I+I   C              MV   + P+ +TY  +++      K++  L +   M+  
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN 425

Query: 371 GIVPTVVTYTVLIFGYCKCLKIDEAIELFHEMREKGLRPDVITYTILIDGLCKSGNLTAA 550
           G+   +VTY ++I G CK  ++ +A +++  +  +GL PD+ TYT ++ GL K G    A
Sbjct: 426 GMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREA 485

Query: 551 KELFHSITEAGVEPN 595
             LF  + E G+ PN
Sbjct: 486 DALFRKMKEDGILPN 500


>ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  156 bits (395), Expect = 1e-35
 Identities = 105/360 (29%), Positives = 167/360 (46%), Gaps = 71/360 (19%)
 Frame = +2

Query: 2    KSEKIDLAMKLFDQTQEKGLILAVRSHTALIEGLCKSHNIATEKEVFHSLTETEVGPDTS 181
            K  ++  A  LF Q   +G+   + ++T+L+  LC          + + +  +++ PD  
Sbjct: 208  KDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVV 267

Query: 182  TCNIIIHVICXXXXXXXXXXXXXXMVRRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSM 361
              + ++  +C              M++R ++PD VTYT +M  + LQ++M   +KVF+ M
Sbjct: 268  IFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMM 327

Query: 362  RNAGIVPTVVTYTVLIFGYCKCLKID---------------------------------- 439
               G  P V++YT LI GYCK  KID                                  
Sbjct: 328  VRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRL 387

Query: 440  -EAIELFHEMREKGLRPDVITYTIL----------------------------------- 511
             +AI LFHEM  +G  PD++TY+IL                                   
Sbjct: 388  QDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNII 447

Query: 512  IDGLCKSGNLTAAKELFHSITEAGVEPNVVMYNVLIRGLCLGGLLAEANELHLEMEKKGI 691
            IDG+C++G L AA++LF +++  G+ P+V  YN++I GLC  GLL EAN+L +EM+    
Sbjct: 448  IDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDC 507

Query: 692  NGD-FTYSLQFDSSTVLQKNDIFKACLHLREMAKCDFSPENSTEPMLVELYSALNDESID 868
            + D  TY+    +   LQ N+  +A   L EM    FS + ST  +LVE+   L+D+ +D
Sbjct: 508  SPDGCTYNT--IARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEM---LSDDGLD 562



 Score =  122 bits (306), Expect = 3e-25
 Identities = 70/217 (32%), Positives = 107/217 (49%), Gaps = 1/217 (0%)
 Frame = +2

Query: 80  HTALIEGLCKSHNIATEKEVFHSLTETEVGPDTSTCNIIIHVICXXXXXXXXXXXXXXMV 259
           +T++I+ LCK   +     +F  +    + PD  T   ++H +C              MV
Sbjct: 199 YTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMV 258

Query: 260 RRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSMRNAGIVPTVVTYTVLIFGYCKCLKID 439
              I PD V ++ ++     + K+    ++ + M   G+ P VVTYT L+ G+C   ++D
Sbjct: 259 NSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMD 318

Query: 440 EAIELFHEMREKGLRPDVITYTILIDGLCKSGNLTAAKELFHSITEAGVEPNVVMYNVLI 619
           EA+++F  M  KG  PDVI+YT LI+G CK   +  A  LF  +      P+   YN L+
Sbjct: 319 EAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLM 378

Query: 620 RGLCLGGLLAEANELHLEMEKKGINGDF-TYSLQFDS 727
            GLC  G L +A  L  EM  +G   D  TYS+  DS
Sbjct: 379 HGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDS 415



 Score =  115 bits (288), Expect = 3e-23
 Identities = 70/225 (31%), Positives = 110/225 (48%)
 Frame = +2

Query: 11  KIDLAMKLFDQTQEKGLILAVRSHTALIEGLCKSHNIATEKEVFHSLTETEVGPDTSTCN 190
           KI  A+ LFD+  ++G    V ++  LI GLCK  N +    +  S+ +    PD     
Sbjct: 141 KIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYT 200

Query: 191 IIIHVICXXXXXXXXXXXXXXMVRRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSMRNA 370
            II  +C              MV + I PD  TYT++++      + K    + N M N+
Sbjct: 201 SIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNS 260

Query: 371 GIVPTVVTYTVLIFGYCKCLKIDEAIELFHEMREKGLRPDVITYTILIDGLCKSGNLTAA 550
            I+P VV ++ ++   CK  K+ EA E+   M ++G+ PDV+TYT L+DG C    +  A
Sbjct: 261 KILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEA 320

Query: 551 KELFHSITEAGVEPNVVMYNVLIRGLCLGGLLAEANELHLEMEKK 685
            ++F  +   G  P+V+ Y  LI G C    + +A  L  EM +K
Sbjct: 321 VKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRK 365



 Score =  109 bits (272), Expect = 2e-21
 Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 1/246 (0%)
 Frame = +2

Query: 83  TALIEGLCKSHNIATEKEVFHSLTETEVGPDTSTCNIIIHVICXXXXXXXXXXXXXXMVR 262
           T LI GLC    I     +F  + +    P+  T   +I+ +C              M +
Sbjct: 130 TTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ 189

Query: 263 RDIKPDKVTYTNIMYWYILQAKMKATLKVFNSMRNAGIVPTVVTYTVLIFGYCKCLKIDE 442
            + +PD V YT+I+       ++     +F+ M   GI P + TYT L+   C   +   
Sbjct: 190 GNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKH 249

Query: 443 AIELFHEMREKGLRPDVITYTILIDGLCKSGNLTAAKELFHSITEAGVEPNVVMYNVLIR 622
              L ++M    + PDV+ ++ ++D LCK G +T A E+   + + GVEP+VV Y  L+ 
Sbjct: 250 VTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMD 309

Query: 623 GLCLGGLLAEANELHLEMEKKGINGD-FTYSLQFDSSTVLQKNDIFKACLHLREMAKCDF 799
           G CL   + EA ++   M +KG   D  +Y+   +    + K D  KA     EM + ++
Sbjct: 310 GHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID--KAMYLFEEMCRKEW 367

Query: 800 SPENST 817
            P+  T
Sbjct: 368 IPDTKT 373



 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 55/174 (31%), Positives = 81/174 (46%), Gaps = 4/174 (2%)
 Frame = +2

Query: 323 AKMK---ATLKVFNSMRNAGIVPTVVTYTVLIFGYCKCLKIDEAIELFHEMREKGLRPDV 493
           AKMK     L +   M + G+ P V T  +LI  +C   ++  A  +  ++ + G +PD 
Sbjct: 67  AKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDP 126

Query: 494 ITYTILIDGLCKSGNLTAAKELFHSITEAGVEPNVVMYNVLIRGLCLGGLLAEANELHLE 673
            T+T LI GLC  G +  A  LF  + + G +PNVV Y  LI GLC  G  + A  L   
Sbjct: 127 TTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRS 186

Query: 674 MEKKGINGDFT-YSLQFDSSTVLQKNDIFKACLHLREMAKCDFSPENSTEPMLV 832
           ME+     D   Y+   DS  + +   + +A     +M     SP+  T   LV
Sbjct: 187 MEQGNCQPDVVIYTSIIDS--LCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLV 238


>ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  154 bits (389), Expect = 6e-35
 Identities = 82/242 (33%), Positives = 131/242 (54%), Gaps = 1/242 (0%)
 Frame = +2

Query: 2   KSEKIDLAMKLFDQTQEKGLILAVRSHTALIEGLCKSHNIATEKEVFHSLTETEVGPDTS 181
           K + +  A  LF +   KG+   V ++T LI G C +  +     + + +    + P+  
Sbjct: 211 KYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVY 270

Query: 182 TCNIIIHVICXXXXXXXXXXXXXXMVRRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSM 361
           T NI++  +C              M++  +KPD +TY+ +M  Y L  ++K    VFN+M
Sbjct: 271 TYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAM 330

Query: 362 RNAGIVPTVVTYTVLIFGYCKCLKIDEAIELFHEMREKGLRPDVITYTILIDGLCKSGNL 541
              G+ P V +YT+LI G+CK   +DEA+ LF EM +K + P ++TY+ LIDGLCKSG +
Sbjct: 331 SLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRI 390

Query: 542 TAAKELFHSITEAGVEPNVVMYNVLIRGLCLGGLLAEANELHLEMEKKGING-DFTYSLQ 718
           +   +L   + + G+  NV+ YN LI GLC  G L  A  L  +M+ +GI    FT+++ 
Sbjct: 391 SYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTIL 450

Query: 719 FD 724
            D
Sbjct: 451 LD 452



 Score =  122 bits (307), Expect = 2e-25
 Identities = 76/240 (31%), Positives = 129/240 (53%), Gaps = 2/240 (0%)
 Frame = +2

Query: 71   VRSHTALIEGLCKSHNIATEKEVFHSLTETEVGPDTSTCNIIIHVICXXXXXXXXXXXXX 250
            V +++ L++G    + +   + VF++++   V PD  +  I+I+  C             
Sbjct: 304  VITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFK 363

Query: 251  XMVRRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSMRNAGIVPTVVTYTVLIFGYCKCL 430
             M ++++ P  VTY++++       ++     + + MR+ GI   V+TY  LI G CK  
Sbjct: 364  EMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNG 423

Query: 431  KIDEAIELFHEMREKGLRPDVITYTILIDGLCKSGNLTAAKELFHSITEAGVEPNVVMYN 610
             +D AI LF++M+++G+RP   T+TIL+DGLCK G L  A+E F  +   G   +V  YN
Sbjct: 424  HLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYN 483

Query: 611  VLIRGLCLGGLLAEANELHLEMEKKGINGDFTYSLQFD--SSTVLQKNDIFKACLHLREM 784
            V+I G C  GLL EA  +  +ME+   NG    ++ FD   + + +K++  KA   LR+M
Sbjct: 484  VMINGHCKQGLLEEALTMLSKMEE---NGCVPNAVTFDIIINALFKKDENDKAEKLLRQM 540



 Score =  112 bits (279), Expect = 3e-22
 Identities = 70/239 (29%), Positives = 115/239 (48%), Gaps = 1/239 (0%)
 Frame = +2

Query: 11  KIDLAMKLFDQTQEKGLILAVRSHTALIEGLCKSHNIATEKEVFHSLTETEVGPDTSTCN 190
           +++ A+   D+   +G+     S+  LI G+CK  +     ++   +      P+    N
Sbjct: 144 QVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYN 203

Query: 191 IIIHVICXXXXXXXXXXXXXXMVRRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSMRNA 370
            II  +C              M  + I  D VTYT ++Y + + +K+K  + + N M   
Sbjct: 204 TIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLK 263

Query: 371 GIVPTVVTYTVLIFGYCKCLKIDEAIELFHEMREKGLRPDVITYTILIDGLCKSGNLTAA 550
            I P V TY +L+   CK  K+ EA  +   M +  ++PDVITY+ L+DG      L  A
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKA 323

Query: 551 KELFHSITEAGVEPNVVMYNVLIRGLCLGGLLAEANELHLEMEKKG-INGDFTYSLQFD 724
           + +F++++  GV P+V  Y +LI G C   ++ EA  L  EM +K  + G  TYS   D
Sbjct: 324 QHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID 382



 Score =  103 bits (258), Expect = 9e-20
 Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 1/219 (0%)
 Frame = +2

Query: 71  VRSHTALIEGLCKSHNIATEKEVFHSLTETEVGPDTSTCNIIIHVICXXXXXXXXXXXXX 250
           V  +  +I+ LCK   ++    +F  +T   +  D  T   +I+  C             
Sbjct: 199 VEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLN 258

Query: 251 XMVRRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSMRNAGIVPTVVTYTVLIFGYCKCL 430
            MV + I P+  TY  ++     + K+K    V   M  A + P V+TY+ L+ GY    
Sbjct: 259 EMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVY 318

Query: 431 KIDEAIELFHEMREKGLRPDVITYTILIDGLCKSGNLTAAKELFHSITEAGVEPNVVMYN 610
           ++ +A  +F+ M   G+ PDV +YTILI+G CK+  +  A  LF  + +  + P +V Y+
Sbjct: 319 ELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYS 378

Query: 611 VLIRGLCLGGLLAEANELHLEMEKKGINGD-FTYSLQFD 724
            LI GLC  G ++   +L  EM  +GI  +  TY+   D
Sbjct: 379 SLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLID 417



 Score = 95.9 bits (237), Expect = 3e-17
 Identities = 69/252 (27%), Positives = 118/252 (46%), Gaps = 1/252 (0%)
 Frame = +2

Query: 89  LIEGLCKSHNIATEKEVFHSLTETEVGPDTSTCNIIIHVICXXXXXXXXXXXXXXMVRRD 268
           +++   K  + +T   + H L    + PD  T NI+I+  C              +++R 
Sbjct: 65  ILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRG 124

Query: 269 IKPDKVTYTNIMYWYILQAKMKATLKVFNSMRNAGIVPTVVTYTVLIFGYCKCLKIDEAI 448
            +P  +T+T ++    L+ ++   L   + +   GI    V+Y  LI G CK      AI
Sbjct: 125 YQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAI 184

Query: 449 ELFHEMREKGLRPDVITYTILIDGLCKSGNLTAAKELFHSITEAGVEPNVVMYNVLIRGL 628
           +L  ++  +  +P+V  Y  +ID LCK   ++ A  LF  +T  G+  +VV Y  LI G 
Sbjct: 185 KLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGF 244

Query: 629 CLGGLLAEANELHLEMEKKGINGD-FTYSLQFDSSTVLQKNDIFKACLHLREMAKCDFSP 805
           C+   L EA  L  EM  K IN + +TY++  D+  + ++  + +A   L  M K    P
Sbjct: 245 CIASKLKEAIGLLNEMVLKTINPNVYTYNILVDA--LCKEGKVKEAKNVLAVMLKACVKP 302

Query: 806 ENSTEPMLVELY 841
           +  T   L++ Y
Sbjct: 303 DVITYSTLMDGY 314



 Score = 90.9 bits (224), Expect = 8e-16
 Identities = 56/230 (24%), Positives = 107/230 (46%)
 Frame = +2

Query: 2   KSEKIDLAMKLFDQTQEKGLILAVRSHTALIEGLCKSHNIATEKEVFHSLTETEVGPDTS 181
           K++ +D A+ LF +  +K ++  + ++++LI+GLCKS  I+   ++   + +        
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRD-------- 402

Query: 182 TCNIIIHVICXXXXXXXXXXXXXXMVRRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSM 361
                                      R I  + +TY +++        +   + +FN M
Sbjct: 403 ---------------------------RGIPANVITYNSLIDGLCKNGHLDRAIALFNKM 435

Query: 362 RNAGIVPTVVTYTVLIFGYCKCLKIDEAIELFHEMREKGLRPDVITYTILIDGLCKSGNL 541
           ++ GI P   T+T+L+ G CK  ++ +A E F ++  KG   DV  Y ++I+G CK G L
Sbjct: 436 KDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLL 495

Query: 542 TAAKELFHSITEAGVEPNVVMYNVLIRGLCLGGLLAEANELHLEMEKKGI 691
             A  +   + E G  PN V ++++I  L       +A +L  +M  +G+
Sbjct: 496 EEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545



 Score = 88.6 bits (218), Expect = 4e-15
 Identities = 65/242 (26%), Positives = 100/242 (41%), Gaps = 1/242 (0%)
 Frame = +2

Query: 2   KSEKIDLAMKLFDQTQEKGLILAVRSHTALIEGLCKSHNIATEKEVFHSLTETEVGPDTS 181
           K +    A+ L  + + KG+   + +   LI   C    I     V   + +    P T 
Sbjct: 71  KIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTI 130

Query: 182 TCNIIIHVICXXXXXXXXXXXXXXMVRRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSM 361
           T   +I  +C              ++ + IK D+V+Y  ++         +  +K+   +
Sbjct: 131 TFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKI 190

Query: 362 RNAGIVPTVVTYTVLIFGYCKCLKIDEAIELFHEMREKGLRPDVITYTILIDGLCKSGNL 541
                 P V  Y  +I   CK   + EA  LF EM  KG+  DV+TYT LI G C +  L
Sbjct: 191 DGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKL 250

Query: 542 TAAKELFHSITEAGVEPNVVMYNVLIRGLCLGGLLAEANELHLEMEKKGINGD-FTYSLQ 718
             A  L + +    + PNV  YN+L+  LC  G + EA  +   M K  +  D  TYS  
Sbjct: 251 KEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTL 310

Query: 719 FD 724
            D
Sbjct: 311 MD 312



 Score = 70.9 bits (172), Expect = 9e-10
 Identities = 35/117 (29%), Positives = 60/117 (51%)
 Frame = +2

Query: 350 FNSMRNAGIVPTVVTYTVLIFGYCKCLKIDEAIELFHEMREKGLRPDVITYTILIDGLCK 529
           FN M      P ++ +  ++  + K      A+ L H +  KG++PD+IT  ILI+  C 
Sbjct: 47  FNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCH 106

Query: 530 SGNLTAAKELFHSITEAGVEPNVVMYNVLIRGLCLGGLLAEANELHLEMEKKGINGD 700
            G +T    +   I + G +P+ + +  LI+GLCL G + +A   H ++  +GI  D
Sbjct: 107 MGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFD 163


>ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
            mitochondrial-like [Glycine max]
          Length = 742

 Score =  154 bits (388), Expect = 8e-35
 Identities = 86/241 (35%), Positives = 130/241 (53%), Gaps = 1/241 (0%)
 Frame = +2

Query: 8    EKIDLAMKLFDQTQEKGLILAVRSHTALIEGLCKSHNIATEKEVFHSLTETEVGPDTSTC 187
            E++   +KL ++ Q KGL     ++ ++I  LCK+  +   ++V   +    + PD    
Sbjct: 301  EQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVY 360

Query: 188  NIIIHVICXXXXXXXXXXXXXXMVRRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSMRN 367
              +I                  M R+ I PD VTYT++++      K+    K+F+ M +
Sbjct: 361  TTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLS 420

Query: 368  AGIVPTVVTYTVLIFGYCKCLKIDEAIELFHEMREKGLRPDVITYTILIDGLCKSGNLTA 547
             G+ P  VTYT LI GYCK  ++ EA  L ++M EKGL P+V+TYT L+DGLCK G +  
Sbjct: 421  KGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDI 480

Query: 548  AKELFHSITEAGVEPNVVMYNVLIRGLCLGGLLAEANELHLEMEKKGINGD-FTYSLQFD 724
            A EL H ++E G++PNV  YN LI GLC  G + +A +L  EM+  G   D  TY+   D
Sbjct: 481  ANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMD 540

Query: 725  S 727
            +
Sbjct: 541  A 541



 Score =  149 bits (376), Expect = 2e-33
 Identities = 90/283 (31%), Positives = 143/283 (50%), Gaps = 1/283 (0%)
 Frame = +2

Query: 11   KIDLAMKLFDQTQEKGLILAVRSHTALIEGLCKSHNIATEKEVFHSLTETEVGPDTSTCN 190
            K+  A  L  Q + +G +  V S++ +++G C+   +    ++   L    + P+  T N
Sbjct: 267  KVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYN 326

Query: 191  IIIHVICXXXXXXXXXXXXXXMVRRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSMRNA 370
             II  +C              M  + I PD V YT ++  +     +    K+F+ M+  
Sbjct: 327  SIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRK 386

Query: 371  GIVPTVVTYTVLIFGYCKCLKIDEAIELFHEMREKGLRPDVITYTILIDGLCKSGNLTAA 550
             IVP  VTYT +I G C+  K+ EA +LF EM  KGL+PD +TYT LIDG CK+G +  A
Sbjct: 387  KIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEA 446

Query: 551  KELFHSITEAGVEPNVVMYNVLIRGLCLGGLLAEANELHLEMEKKGINGDF-TYSLQFDS 727
              L + + E G+ PNVV Y  L+ GLC  G +  ANEL  EM +KG+  +  TY+   + 
Sbjct: 447  FSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALING 506

Query: 728  STVLQKNDIFKACLHLREMAKCDFSPENSTEPMLVELYSALND 856
              + +  +I +A   + EM    F P+  T   +++ Y  + +
Sbjct: 507  --LCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGE 547



 Score =  149 bits (376), Expect = 2e-33
 Identities = 78/204 (38%), Positives = 114/204 (55%)
 Frame = +2

Query: 80  HTALIEGLCKSHNIATEKEVFHSLTETEVGPDTSTCNIIIHVICXXXXXXXXXXXXXXMV 259
           +T LI G  KS N++ E ++F  +   ++ PD  T   +IH +C              M+
Sbjct: 360 YTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEML 419

Query: 260 RRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSMRNAGIVPTVVTYTVLIFGYCKCLKID 439
            + +KPD+VTYT ++  Y    +MK    + N M   G+ P VVTYT L+ G CKC ++D
Sbjct: 420 SKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVD 479

Query: 440 EAIELFHEMREKGLRPDVITYTILIDGLCKSGNLTAAKELFHSITEAGVEPNVVMYNVLI 619
            A EL HEM EKGL+P+V TY  LI+GLCK GN+  A +L   +  AG  P+ + Y  ++
Sbjct: 480 IANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIM 539

Query: 620 RGLCLGGLLAEANELHLEMEKKGI 691
              C  G +A+A+EL   M  KG+
Sbjct: 540 DAYCKMGEMAKAHELLRIMLDKGL 563



 Score =  117 bits (292), Expect = 1e-23
 Identities = 87/307 (28%), Positives = 137/307 (44%), Gaps = 37/307 (12%)
 Frame = +2

Query: 23   AMKLFDQTQEKGLILAVRSHTALIEGLCKSHN-IATEKEVFHSLTETEVGPDTSTCNIII 199
            A KLFD+    G++++V S    +  L  S + I T   VF   +E  V  +T + NII+
Sbjct: 200  AGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNIIL 259

Query: 200  HVICXXXXXXXXXXXXXXM-----------------------------------VRRDIK 274
            H++C              M                                    R+ +K
Sbjct: 260  HLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLK 319

Query: 275  PDKVTYTNIMYWYILQAKMKATLKVFNSMRNAGIVPTVVTYTVLIFGYCKCLKIDEAIEL 454
            P++ TY +I+ +     ++    +V   M+N  I P  V YT LI G+ K   +    +L
Sbjct: 320  PNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKL 379

Query: 455  FHEMREKGLRPDVITYTILIDGLCKSGNLTAAKELFHSITEAGVEPNVVMYNVLIRGLCL 634
            F EM+ K + PD +TYT +I GLC++G +  A++LF  +   G++P+ V Y  LI G C 
Sbjct: 380  FDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCK 439

Query: 635  GGLLAEANELHLEMEKKGINGD-FTYSLQFDSSTVLQKNDIFKACLHLREMAKCDFSPEN 811
             G + EA  LH +M +KG+  +  TY+   D      + DI    LH  EM++    P  
Sbjct: 440  AGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLH--EMSEKGLQPNV 497

Query: 812  STEPMLV 832
             T   L+
Sbjct: 498  CTYNALI 504



 Score =  111 bits (278), Expect = 5e-22
 Identities = 75/263 (28%), Positives = 117/263 (44%), Gaps = 35/263 (13%)
 Frame = +2

Query: 11   KIDLAMKLFDQTQEKGLILAVRSHTALIEGLCKS---------HNIATEK---------- 133
            K+  A KLF +   KGL     ++TALI+G CK+         HN   EK          
Sbjct: 407  KVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYT 466

Query: 134  ----------------EVFHSLTETEVGPDTSTCNIIIHVICXXXXXXXXXXXXXXMVRR 265
                            E+ H ++E  + P+  T N +I+ +C              M   
Sbjct: 467  ALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLA 526

Query: 266  DIKPDKVTYTNIMYWYILQAKMKATLKVFNSMRNAGIVPTVVTYTVLIFGYCKCLKIDEA 445
               PD +TYT IM  Y    +M    ++   M + G+ PT+VT+ VL+ G+C    +++ 
Sbjct: 527  GFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDG 586

Query: 446  IELFHEMREKGLRPDVITYTILIDGLCKSGNLTAAKELFHSITEAGVEPNVVMYNVLIRG 625
              L   M +KG+ P+  T+  L+   C   N+ A  E++  +   GV P+   YN+LI+G
Sbjct: 587  ERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKG 646

Query: 626  LCLGGLLAEANELHLEMEKKGIN 694
             C    + EA  LH EM +KG +
Sbjct: 647  HCKARNMKEAWFLHKEMVEKGFS 669



 Score =  108 bits (271), Expect = 3e-21
 Identities = 74/264 (28%), Positives = 113/264 (42%), Gaps = 35/264 (13%)
 Frame = +2

Query: 2    KSEKIDLAMKLFDQTQEKGLILAVRSHTALIEGLCKSHNIATEKEVFHSLTETEVGPDTS 181
            K+ ++  A  L +Q  EKGL   V ++TAL++GLCK   +    E+ H ++E  + P+  
Sbjct: 439  KAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVC 498

Query: 182  TCNIIIHVICXXXXXXXXXXXXXXMVRRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSM 361
            T N +I+ +C              M      PD +TYT IM  Y    +M    ++   M
Sbjct: 499  TYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIM 558

Query: 362  RNAGIVPTVVTYTVLIFGYCKCLKIDEA-------------------------------- 445
             + G+ PT+VT+ VL+ G+C    +++                                 
Sbjct: 559  LDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNM 618

Query: 446  ---IELFHEMREKGLRPDVITYTILIDGLCKSGNLTAAKELFHSITEAGVEPNVVMYNVL 616
               IE++  M  +G+ PD  TY ILI G CK+ N+  A  L   + E G       YN L
Sbjct: 619  RATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSL 678

Query: 617  IRGLCLGGLLAEANELHLEMEKKG 688
            I+G        EA +L  EM   G
Sbjct: 679  IKGFYKRKKFEEARKLFEEMRTHG 702



 Score = 95.9 bits (237), Expect = 3e-17
 Identities = 53/206 (25%), Positives = 96/206 (46%)
 Frame = +2

Query: 2    KSEKIDLAMKLFDQTQEKGLILAVRSHTALIEGLCKSHNIATEKEVFHSLTETEVGPDTS 181
            K   I+ A+KL ++    G      ++T +++  CK   +A   E+   + +  + P   
Sbjct: 509  KVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIV 568

Query: 182  TCNIIIHVICXXXXXXXXXXXXXXMVRRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSM 361
            T N++++  C              M+ + I P+  T+ ++M  Y ++  M+AT++++  M
Sbjct: 569  TFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGM 628

Query: 362  RNAGIVPTVVTYTVLIFGYCKCLKIDEAIELFHEMREKGLRPDVITYTILIDGLCKSGNL 541
               G+VP   TY +LI G+CK   + EA  L  EM EKG      +Y  LI G  K    
Sbjct: 629  HAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKF 688

Query: 542  TAAKELFHSITEAGVEPNVVMYNVLI 619
              A++LF  +   G      +Y++ +
Sbjct: 689  EEARKLFEEMRTHGFIAEKEIYDIFV 714


>ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355525115|gb|AET05569.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  152 bits (383), Expect = 3e-34
 Identities = 76/210 (36%), Positives = 117/210 (55%)
 Frame = +2

Query: 2   KSEKIDLAMKLFDQTQEKGLILAVRSHTALIEGLCKSHNIATEKEVFHSLTETEVGPDTS 181
           K++ +D AM LF +   K L+  + S+ +LI+GLC S  I+  K++   +  +   PD  
Sbjct: 347 KTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVV 406

Query: 182 TCNIIIHVICXXXXXXXXXXXXXXMVRRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSM 361
           T NI+I  +C              M+++ +KP+ VTY  +M  Y L+  +     +FN M
Sbjct: 407 TYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRM 466

Query: 362 RNAGIVPTVVTYTVLIFGYCKCLKIDEAIELFHEMREKGLRPDVITYTILIDGLCKSGNL 541
             +G+ P ++ Y VLI GYCK   +DEAI LF EMR K L PD+ +Y  LIDGLC  G +
Sbjct: 467 VKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRI 526

Query: 542 TAAKELFHSITEAGVEPNVVMYNVLIRGLC 631
              +EL   + ++G  P+V+ YN+L+   C
Sbjct: 527 PHVQELLDEMCDSGQSPDVITYNILLDAFC 556



 Score =  144 bits (363), Expect = 6e-32
 Identities = 91/284 (32%), Positives = 140/284 (49%), Gaps = 3/284 (1%)
 Frame = +2

Query: 23   AMKLFDQTQEKGLILAVRSHTALIEGLCKSHNIATEKEVFHSLTETEVGPDTSTCNIIIH 202
            A+ L  Q  E+G++L   ++ +LI+G C         ++   +    V PD  T NI+I 
Sbjct: 214  ALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID 273

Query: 203  VICXXXXXXXXXXXXXXMVRRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSMRNAGIVP 382
             +C              M +R  KPD VTY  +M  Y  +  +    ++FN M   G+ P
Sbjct: 274  ALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEP 333

Query: 383  TVVTYTVLIFGYCKCLKIDEAIELFHEMREKGLRPDVITYTILIDGLCKSGNLTAAKELF 562
             V+ Y VLI GYCK   +DEA+ LF E+  K L P + +Y  LIDGLC SG ++  K+L 
Sbjct: 334  DVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLL 393

Query: 563  HSITEAGVEPNVVMYNVLIRGLCLGGLLAEANELHLEMEKKGINGDF-TYSLQFDSSTVL 739
              +  +   P+VV YN+LI  LC  G + EA  + + M KKG+  +  TY+   D   + 
Sbjct: 394  DEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCL- 452

Query: 740  QKNDIFKACLHLREMAKCDFSPENSTEPMLVELY--SALNDESI 865
             +N++  A      M K    P+     +L+  Y  + + DE+I
Sbjct: 453  -RNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAI 495



 Score =  118 bits (296), Expect = 4e-24
 Identities = 69/256 (26%), Positives = 129/256 (50%), Gaps = 1/256 (0%)
 Frame = +2

Query: 77   SHTALIEGLCKSHNIATEKEVFHSLTETEVGPDTSTCNIIIHVICXXXXXXXXXXXXXXM 256
            ++ AL+EG C   N+   +E+F+ + +  + PD    N++I   C              +
Sbjct: 302  TYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361

Query: 257  VRRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSMRNAGIVPTVVTYTVLIFGYCKCLKI 436
              +++ P   +Y +++       ++    K+ + M  +   P VVTY +LI   CK  +I
Sbjct: 362  CNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRI 421

Query: 437  DEAIELFHEMREKGLRPDVITYTILIDGLCKSGNLTAAKELFHSITEAGVEPNVVMYNVL 616
             EA+ +   M +KG++P+++TY  ++DG C   N+  AK++F+ + ++G+EP+++ YNVL
Sbjct: 422  LEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVL 481

Query: 617  IRGLCLGGLLAEANELHLEMEKKGINGDF-TYSLQFDSSTVLQKNDIFKACLHLREMAKC 793
            I G C   ++ EA  L  EM  K +  D  +Y+   D    L +    +  L   EM   
Sbjct: 482  INGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLD--EMCDS 539

Query: 794  DFSPENSTEPMLVELY 841
              SP+  T  +L++ +
Sbjct: 540  GQSPDVITYNILLDAF 555



 Score =  117 bits (292), Expect = 1e-23
 Identities = 80/289 (27%), Positives = 134/289 (46%), Gaps = 1/289 (0%)
 Frame = +2

Query: 2    KSEKIDLAMKLFDQTQEKGLILAVRSHTALIEGLCKSHNIATEKEVFHSLTETEVGPDTS 181
            K+ +I  A+ L  + ++  +   +  ++ALI+GLCK   ++    +   + E  +  D  
Sbjct: 172  KNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231

Query: 182  TCNIIIHVICXXXXXXXXXXXXXXMVRRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSM 361
            T N +I   C              MVR ++ PD  T+  ++     + ++     V   M
Sbjct: 232  TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291

Query: 362  RNAGIVPTVVTYTVLIFGYCKCLKIDEAIELFHEMREKGLRPDVITYTILIDGLCKSGNL 541
               G  P +VTY  L+ GYC    + EA ELF+ M ++GL PDV+ Y +LIDG CK+  +
Sbjct: 292  SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMV 351

Query: 542  TAAKELFHSITEAGVEPNVVMYNVLIRGLCLGGLLAEANELHLEMEKKGINGD-FTYSLQ 718
              A  LF  +    + P +  YN LI GLC  G ++   +L  EM       D  TY++ 
Sbjct: 352  DEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNIL 411

Query: 719  FDSSTVLQKNDIFKACLHLREMAKCDFSPENSTEPMLVELYSALNDESI 865
             D+  + ++  I +A   L  M K    P   T   +++ Y   N+ ++
Sbjct: 412  IDA--LCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNV 458



 Score =  108 bits (270), Expect = 4e-21
 Identities = 66/254 (25%), Positives = 123/254 (48%)
 Frame = +2

Query: 2    KSEKIDLAMKLFDQTQEKGLILAVRSHTALIEGLCKSHNIATEKEVFHSLTETEVGPDTS 181
            K  +I  A+ +     +KG+   + ++ A+++G C  +N+   K++F+ + ++ + PD  
Sbjct: 417  KEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDIL 476

Query: 182  TCNIIIHVICXXXXXXXXXXXXXXMVRRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSM 361
              N++I+  C              M  +++ PD  +Y +++       ++    ++ + M
Sbjct: 477  NYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEM 536

Query: 362  RNAGIVPTVVTYTVLIFGYCKCLKIDEAIELFHEMREKGLRPDVITYTILIDGLCKSGNL 541
             ++G  P V+TY +L+  +CK    D+AI LF ++ E G+ PD  T   ++D LCK   L
Sbjct: 537  CDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKL 595

Query: 542  TAAKELFHSITEAGVEPNVVMYNVLIRGLCLGGLLAEANELHLEMEKKGINGDFTYSLQF 721
              A++    +   G  PNV  Y +LI  LC  G   EA  L  +ME      D   + + 
Sbjct: 596  KMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPD-AITFEI 654

Query: 722  DSSTVLQKNDIFKA 763
                +LQ+N+  KA
Sbjct: 655  IIGVLLQRNETDKA 668



 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 68/274 (24%), Positives = 121/274 (44%), Gaps = 1/274 (0%)
 Frame = +2

Query: 23  AMKLFDQTQEKGLILAVRSHTALIEGLCKSHNIATEKEVFHSLTETEVGPDTSTCNIIIH 202
           A+ LF Q Q KG+  ++ + T LI       + A    +  ++ ++   P+  T N II+
Sbjct: 74  AISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIIN 133

Query: 203 VICXXXXXXXXXXXXXXMVRRDIKPDKVTYTNIMYWYILQAKMKATLKVFNSMRNAGIVP 382
             C              ++ +    D+ TY  ++       ++KA L +   M  + + P
Sbjct: 134 GFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQP 193

Query: 383 TVVTYTVLIFGYCKCLKIDEAIELFHEMREKGLRPDVITYTILIDGLCKSGNLTAAKELF 562
            +V Y+ LI G CK   + +A+ L  ++ E+G+  D +TY  LIDG C  G      +L 
Sbjct: 194 NLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLL 253

Query: 563 HSITEAGVEPNVVMYNVLIRGLCLGGLLAEANELHLEMEKKGINGDF-TYSLQFDSSTVL 739
             +    V+P+   +N+LI  LC  G + EA  +   M K+G   D  TY+   +     
Sbjct: 254 TKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEG--YC 311

Query: 740 QKNDIFKACLHLREMAKCDFSPENSTEPMLVELY 841
            + ++ +A      M K    P+     +L++ Y
Sbjct: 312 SRENVHEARELFNRMVKRGLEPDVLNYNVLIDGY 345



 Score = 86.7 bits (213), Expect = 2e-14
 Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 1/208 (0%)
 Frame = +2

Query: 104 CKSHNIATEKEVFHSLTETEVGPDTSTCNIIIHVICXXXXXXXXXXXXXXMVRRDIKPDK 283
           C+  N+      F+ +      P TS  + ++  I               +  + I P  
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 284 VTYTNIMYWYILQAKMKATLKVFNSMRNAGIVPTVVTYTVLIFGYCKCLKIDEAIELFHE 463
            T+T ++  Y  Q+       +  ++  +G  P +VT+  +I G+C    I +A++    
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 464 MREKGLRPDVITYTILIDGLCKSGNLTAAKELFHSITEAGVEPNVVMYNVLIRGLCLGGL 643
           +  +G   D  TY  LI+GL K+G + AA  L   + ++ V+PN+VMY+ LI GLC  G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 644 LAEANELHLEMEKKGINGD-FTYSLQFD 724
           +++A  L  ++ ++GI  D  TY+   D
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLID 238