BLASTX nr result

ID: Coptis25_contig00023493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023493
         (902 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525441.1| short-chain type dehydrogenase, putative [Ri...   370   e-100
ref|XP_002319165.1| predicted protein [Populus trichocarpa] gi|2...   352   9e-95
ref|XP_002282164.1| PREDICTED: short-chain type dehydrogenase/re...   348   1e-93
ref|XP_002319166.1| predicted protein [Populus trichocarpa] gi|2...   339   5e-91
ref|XP_004147531.1| PREDICTED: short-chain type dehydrogenase/re...   339   6e-91

>ref|XP_002525441.1| short-chain type dehydrogenase, putative [Ricinus communis]
           gi|223535254|gb|EEF36931.1| short-chain type
           dehydrogenase, putative [Ricinus communis]
          Length = 268

 Score =  370 bits (951), Expect = e-100
 Identities = 181/257 (70%), Positives = 219/257 (85%)
 Frame = -2

Query: 832 STMLPLNGRVAIVTGASRGIGRAIALHLASIGAKLVINYASSPTEADRVASEINSSSSNP 653
           S+ LPLN RVAIVTGASRGIGRAI++HL S+GAK+V+NYASS T+AD +ASE+N+S+S  
Sbjct: 11  SSSLPLNSRVAIVTGASRGIGRAISIHLHSLGAKVVLNYASSSTQADHLASELNASASAS 70

Query: 652 DPQAIAVQANVSNPDQVKSLFDQAEKAFGTQTYILVNCAGVLDSKYPTLANTTVEDWDTT 473
            P A+A++A+VS+PDQVK LFD+ E+ FG++ +ILVNCAGV+D KYP+LANTTVEDWD T
Sbjct: 71  HPHAVAIKADVSDPDQVKQLFDRTEQEFGSKIHILVNCAGVMDPKYPSLANTTVEDWDMT 130

Query: 472 FSVNTRGAFLCCXXXXXXXXXXXXXRIMTITSSLVGSLYPGYSAYAASKAAVETMIKILA 293
           F+VN +GAFLCC             RI+ I++S+VGS +PGY+AYAASKAAVETM KILA
Sbjct: 131 FNVNAKGAFLCCREAANRLASGGGGRIIMISTSVVGSNFPGYAAYAASKAAVETMTKILA 190

Query: 292 KELKGTGITANCIAPGPVATELFYAGKTEEMIKRVADGCPLGRIGETNDIAPLVGFLASD 113
           KELKGTGITANC+APGPVATELF+AGKTEE IKR+AD CPLGR+GE  DI+ +VGFLASD
Sbjct: 191 KELKGTGITANCVAPGPVATELFFAGKTEETIKRIADSCPLGRLGEPKDISEIVGFLASD 250

Query: 112 AGEWINGQIIRVNGGSV 62
           AGEWINGQ+IRVNGG V
Sbjct: 251 AGEWINGQVIRVNGGFV 267


>ref|XP_002319165.1| predicted protein [Populus trichocarpa] gi|222857541|gb|EEE95088.1|
           predicted protein [Populus trichocarpa]
          Length = 268

 Score =  352 bits (902), Expect = 9e-95
 Identities = 172/257 (66%), Positives = 214/257 (83%)
 Frame = -2

Query: 832 STMLPLNGRVAIVTGASRGIGRAIALHLASIGAKLVINYASSPTEADRVASEINSSSSNP 653
           S+ LPL+GRVAIVTGAS GIGRAI++HL S+GA++VINYAS+  +AD +ASE+N+S+ + 
Sbjct: 11  SSSLPLDGRVAIVTGASGGIGRAISIHLHSLGARVVINYASNSNQADLLASELNASAPSS 70

Query: 652 DPQAIAVQANVSNPDQVKSLFDQAEKAFGTQTYILVNCAGVLDSKYPTLANTTVEDWDTT 473
            PQAIA++A+VS+PDQVK LF + E+ FG++ +IL +CAGVLD KYP LANTTVEDWD T
Sbjct: 71  HPQAIAIKADVSDPDQVKQLFSRTEEEFGSKIHILAHCAGVLDPKYPILANTTVEDWDMT 130

Query: 472 FSVNTRGAFLCCXXXXXXXXXXXXXRIMTITSSLVGSLYPGYSAYAASKAAVETMIKILA 293
           F+VNT+GAFLCC             RI+ I++SLVG+  PGY+AY ASKAAVETM +I+A
Sbjct: 131 FNVNTKGAFLCCREATNRLAYGGGGRIIMISTSLVGAPTPGYAAYTASKAAVETMTRIVA 190

Query: 292 KELKGTGITANCIAPGPVATELFYAGKTEEMIKRVADGCPLGRIGETNDIAPLVGFLASD 113
           KELKGTGITANC+APGPVATELF+AGKTEE +KR+AD CPL R+GE  DI+ +VGF+ASD
Sbjct: 191 KELKGTGITANCVAPGPVATELFFAGKTEETLKRIADACPLNRLGEPEDISKVVGFIASD 250

Query: 112 AGEWINGQIIRVNGGSV 62
           AGEWINGQ+IRVNGG V
Sbjct: 251 AGEWINGQVIRVNGGFV 267


>ref|XP_002282164.1| PREDICTED: short-chain type dehydrogenase/reductase-like [Vitis
           vinifera]
          Length = 265

 Score =  348 bits (893), Expect = 1e-93
 Identities = 175/256 (68%), Positives = 211/256 (82%), Gaps = 1/256 (0%)
 Frame = -2

Query: 832 STMLPLNGRVAIVTGASRGIGRAIALHLASIGAKLVINYASSPTEADRVASEINS-SSSN 656
           S+ LPL GRVAIVTGASRGIGRAIA+HL S+GA+LV+NYAS+   AD +AS++NS  SS+
Sbjct: 8   SSSLPLEGRVAIVTGASRGIGRAIAIHLRSLGARLVLNYASNSALADALASQLNSPDSSS 67

Query: 655 PDPQAIAVQANVSNPDQVKSLFDQAEKAFGTQTYILVNCAGVLDSKYPTLANTTVEDWDT 476
             P AIAVQANVS+PDQVK LFD+A++ FG+  +ILVNCAGVLD KYP+LANTTVEDWD 
Sbjct: 68  SHPVAIAVQANVSDPDQVKMLFDRAQQEFGS-IHILVNCAGVLDPKYPSLANTTVEDWDN 126

Query: 475 TFSVNTRGAFLCCXXXXXXXXXXXXXRIMTITSSLVGSLYPGYSAYAASKAAVETMIKIL 296
           TFS+NTRG+FL C             RI+ IT+S V +L PGY+AYAASKAAVETM KIL
Sbjct: 127 TFSINTRGSFLVCREAANRLIRGGGGRIILITTSAVAALTPGYAAYAASKAAVETMTKIL 186

Query: 295 AKELKGTGITANCIAPGPVATELFYAGKTEEMIKRVADGCPLGRIGETNDIAPLVGFLAS 116
           AKELKGT +TANC+APGP+ATE+F+ GK+EE+IKR+ D CP+GR+GE  D+  LVGFLA+
Sbjct: 187 AKELKGTSVTANCVAPGPIATEMFFEGKSEELIKRLVDACPMGRLGEPKDVTQLVGFLAT 246

Query: 115 DAGEWINGQIIRVNGG 68
           DAGEWINGQIIR+NGG
Sbjct: 247 DAGEWINGQIIRINGG 262


>ref|XP_002319166.1| predicted protein [Populus trichocarpa] gi|222857542|gb|EEE95089.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  339 bits (870), Expect = 5e-91
 Identities = 169/254 (66%), Positives = 206/254 (81%)
 Frame = -2

Query: 823 LPLNGRVAIVTGASRGIGRAIALHLASIGAKLVINYASSPTEADRVASEINSSSSNPDPQ 644
           LPL  RVAIVTG+SRGIG+AIA+HLAS+GAKLVINY S+  +AD VA++INSS  +  P+
Sbjct: 10  LPLQDRVAIVTGSSRGIGKAIAIHLASLGAKLVINYTSNKEQADLVANDINSSCVDNTPR 69

Query: 643 AIAVQANVSNPDQVKSLFDQAEKAFGTQTYILVNCAGVLDSKYPTLANTTVEDWDTTFSV 464
           AI  QANVS+P QVK LFD+AE+ FG+Q +ILVNCAGVLD KYP++ NT++ED+D  FSV
Sbjct: 70  AIVAQANVSDPAQVKFLFDEAERVFGSQLHILVNCAGVLDPKYPSIPNTSLEDFDHIFSV 129

Query: 463 NTRGAFLCCXXXXXXXXXXXXXRIMTITSSLVGSLYPGYSAYAASKAAVETMIKILAKEL 284
           NTRGAFLCC             RI+ ++SS+VG L PG+ AYAASKAAVET+I+ILAKEL
Sbjct: 130 NTRGAFLCCKEAASRLKHGGGGRIIVLSSSMVGGLMPGFGAYAASKAAVETIIRILAKEL 189

Query: 283 KGTGITANCIAPGPVATELFYAGKTEEMIKRVADGCPLGRIGETNDIAPLVGFLASDAGE 104
           KGTGITANC+APGPVATE+++AGKTEE IK   +  PLGR+GET DIA +VGF+A+DA E
Sbjct: 190 KGTGITANCVAPGPVATEMYFAGKTEEQIKNNIESSPLGRLGETKDIAEVVGFMATDASE 249

Query: 103 WINGQIIRVNGGSV 62
           WINGQ+IR NGG V
Sbjct: 250 WINGQVIRANGGYV 263


>ref|XP_004147531.1| PREDICTED: short-chain type dehydrogenase/reductase-like [Cucumis
           sativus]
          Length = 258

 Score =  339 bits (869), Expect = 6e-91
 Identities = 170/257 (66%), Positives = 207/257 (80%)
 Frame = -2

Query: 832 STMLPLNGRVAIVTGASRGIGRAIALHLASIGAKLVINYASSPTEADRVASEINSSSSNP 653
           +T LPL+GR AIVTGASRGIGRAIA+HL S+GA LV+NYAS+ T+AD +ASE+N SS+ P
Sbjct: 2   ATALPLDGRTAIVTGASRGIGRAIAIHLHSLGANLVLNYASNSTQADLLASELNQSSA-P 60

Query: 652 DPQAIAVQANVSNPDQVKSLFDQAEKAFGTQTYILVNCAGVLDSKYPTLANTTVEDWDTT 473
             +A+AVQA+VS+PD VK LFD AEK FG++ +ILVN AG+LDSKYP+L  TTVEDWD T
Sbjct: 61  LRRAVAVQADVSDPDHVKRLFDSAEKEFGSEIHILVNSAGILDSKYPSLVETTVEDWDET 120

Query: 472 FSVNTRGAFLCCXXXXXXXXXXXXXRIMTITSSLVGSLYPGYSAYAASKAAVETMIKILA 293
           F VN RGAFL C             RI+ IT+S+V SL PGY AYAASKAAVE M KI A
Sbjct: 121 FRVNCRGAFLVCKEAENRIKRGGGGRIVLITTSIVLSLPPGYGAYAASKAAVEAMAKIAA 180

Query: 292 KELKGTGITANCIAPGPVATELFYAGKTEEMIKRVADGCPLGRIGETNDIAPLVGFLASD 113
           KELKGTGIT NC+APGPVATELFYAGK+EE + R+A+ CP+GR+G+ +D+A +VGFL +D
Sbjct: 181 KELKGTGITVNCVAPGPVATELFYAGKSEETVARMAEACPMGRLGQPDDLAKVVGFLVTD 240

Query: 112 AGEWINGQIIRVNGGSV 62
           AGEW+NGQ++RVNGG V
Sbjct: 241 AGEWVNGQVVRVNGGLV 257


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