BLASTX nr result

ID: Coptis25_contig00023491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023491
         (747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284699.1| PREDICTED: uncharacterized protein LOC100259...   164   1e-38
gb|AEO36154.1| hypothetical protein [Amblyomma maculatum]             155   1e-35
ref|XP_002511078.1| electron transporter, putative [Ricinus comm...   149   6e-34
dbj|BAJ53115.1| JHL07K02.5 [Jatropha curcas]                          149   8e-34
ref|NP_001235582.1| uncharacterized protein LOC100306219 [Glycin...   148   1e-33

>ref|XP_002284699.1| PREDICTED: uncharacterized protein LOC100259528 [Vitis vinifera]
          Length = 218

 Score =  164 bits (416), Expect = 1e-38
 Identities = 86/160 (53%), Positives = 101/160 (63%), Gaps = 3/160 (1%)
 Frame = +3

Query: 24  MALQAPTRLNSTPS--LSTTGNVGLQRPXXXXXXXXXXXXXXXXXXXXPPQKHKL-ATAP 194
           MAL +PTRL +T S  L+ TGNVGL+RP                    P Q   L +TAP
Sbjct: 57  MALPSPTRLEATKSCPLAPTGNVGLRRPMDRFALRSSFFSPSIHLLLPPNQHRALPSTAP 116

Query: 195 KIYMRTTSKQAYICRDCGYIYSDKTPFEKQPDKYFCPVCGAPKRRFRVYEPPVDKKANET 374
           KI MR  SKQAYICRDCGYIY+D+TPFEK PD YFCPVCGAPKRRFR Y+P V K AN+ 
Sbjct: 117 KISMRVASKQAYICRDCGYIYNDRTPFEKLPDGYFCPVCGAPKRRFRPYQPAVAKNANDM 176

Query: 375 DARKARKAQLKRDEAIGKXXXXXXXXXXXXXXXXYFYINN 494
           D RKARK Q+++DEAIG+                YFY+N+
Sbjct: 177 DVRKARKTQIQKDEAIGRALPIAIVVGIAALAGLYFYLNS 216


>gb|AEO36154.1| hypothetical protein [Amblyomma maculatum]
          Length = 166

 Score =  155 bits (391), Expect = 1e-35
 Identities = 87/166 (52%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
 Frame = +3

Query: 24  MALQAPTRLNSTPS-----LSTTGNV-GLQRPXXXXXXXXXXXXXXXXXXXXPP-QKHKL 182
           MALQAP  L S+ +     L   G   GL+RP                       QK   
Sbjct: 1   MALQAPAGLKSSTTRAPLLLPQAGQAAGLRRPSDRYALRSSFFSPSVQQLLLSSSQKAVP 60

Query: 183 ATAPKIYMRTTSKQAYICRDCGYIYSDKTPFEKQPDKYFCPVCGAPKRRFRVYEPPVDKK 362
            T PK  MR  SKQAYICRDCGYIY+DKTPFEK PDKYFCPVCGAPKRRFR YEP + K 
Sbjct: 61  TTEPKFSMRVASKQAYICRDCGYIYNDKTPFEKLPDKYFCPVCGAPKRRFRAYEPKITKD 120

Query: 363 ANETDARKARKAQLKRDEAIGKXXXXXXXXXXXXXXXXYFYINNAF 500
           AN  D RKARK QLKRDEAIGK                YFY+NNA+
Sbjct: 121 ANSLDVRKARKEQLKRDEAIGKALPVALVLGVAGLAGLYFYLNNAY 166


>ref|XP_002511078.1| electron transporter, putative [Ricinus communis]
           gi|223550193|gb|EEF51680.1| electron transporter,
           putative [Ricinus communis]
          Length = 170

 Score =  149 bits (376), Expect = 6e-34
 Identities = 81/167 (48%), Positives = 100/167 (59%), Gaps = 9/167 (5%)
 Frame = +3

Query: 27  ALQAPTRLNST-----PSLST--TGNVGLQRPXXXXXXXXXXXXXXXXXXXXPPQKHK-- 179
           AL AP+RL ++     PSL    + N GL RP                    P  +H+  
Sbjct: 3   ALHAPSRLQASMSTPLPSLLAPISSNAGL-RPPPDRFALKSSFFSPSLHLLLPSNQHRPL 61

Query: 180 LATAPKIYMRTTSKQAYICRDCGYIYSDKTPFEKQPDKYFCPVCGAPKRRFRVYEPPVDK 359
            A AP+  MR  SKQAYICRDCGYIY+++TPFEK PDKYFCPVCGAPKRRFR Y P V+K
Sbjct: 62  AAAAPRFSMRVASKQAYICRDCGYIYNERTPFEKLPDKYFCPVCGAPKRRFRQYTPTVNK 121

Query: 360 KANETDARKARKAQLKRDEAIGKXXXXXXXXXXXXXXXXYFYINNAF 500
             N+TD RKARKAQ++RDEAIG+                YFY++++F
Sbjct: 122 NDNQTDTRKARKAQIQRDEAIGRALPIAIVVGVVALAGLYFYLSSSF 168


>dbj|BAJ53115.1| JHL07K02.5 [Jatropha curcas]
          Length = 170

 Score =  149 bits (375), Expect = 8e-34
 Identities = 82/168 (48%), Positives = 98/168 (58%), Gaps = 9/168 (5%)
 Frame = +3

Query: 24  MALQAPTRLNS---TPSLSTTG--NVGLQRPXXXXXXXXXXXXXXXXXXXXPP----QKH 176
           MALQAPTRL +   +PSL      N GL+ P                          Q+ 
Sbjct: 1   MALQAPTRLQARKPSPSLLAPNGSNAGLRAPSDRFALKSSFFSPSLYLLSLANSNQLQQP 60

Query: 177 KLATAPKIYMRTTSKQAYICRDCGYIYSDKTPFEKQPDKYFCPVCGAPKRRFRVYEPPVD 356
             ++AP+  MR  SKQAYICRDCGYIY+++TPFEK PDKYFCPVCGAPKRRF+ Y P V 
Sbjct: 61  LASSAPRYSMRVASKQAYICRDCGYIYNERTPFEKLPDKYFCPVCGAPKRRFKPYAPTVT 120

Query: 357 KKANETDARKARKAQLKRDEAIGKXXXXXXXXXXXXXXXXYFYINNAF 500
           K  N+TD RKARKAQL+RDEAIG+                YFY+N +F
Sbjct: 121 KNDNQTDVRKARKAQLQRDEAIGRALPIGIAVGAVALAGLYFYLNGSF 168


>ref|NP_001235582.1| uncharacterized protein LOC100306219 [Glycine max]
           gi|255627899|gb|ACU14294.1| unknown [Glycine max]
          Length = 157

 Score =  148 bits (373), Expect = 1e-33
 Identities = 80/163 (49%), Positives = 92/163 (56%), Gaps = 4/163 (2%)
 Frame = +3

Query: 24  MALQAPTRLNSTPSLSTT-GNVGLQRPXXXXXXXXXXXXXXXXXXXX---PPQKHKLATA 191
           MALQAP      PSL T  GN GL+RP                       P   H  +  
Sbjct: 1   MALQAP------PSLHTVNGNAGLRRPLMNPSSFSLKSSFFSGSLNFYLHPNHLHLTSAP 54

Query: 192 PKIYMRTTSKQAYICRDCGYIYSDKTPFEKQPDKYFCPVCGAPKRRFRVYEPPVDKKANE 371
           P+I MR  SKQAYICRDCGYIY D+TPFEK PD YFCPVCGAPKRRFR Y P + K  N+
Sbjct: 55  PRISMRVASKQAYICRDCGYIYKDRTPFEKLPDNYFCPVCGAPKRRFRPYAPAITKNDND 114

Query: 372 TDARKARKAQLKRDEAIGKXXXXXXXXXXXXXXXXYFYINNAF 500
           T  RKARKA+L+RDEA+GK                YFY+N+ +
Sbjct: 115 TAVRKARKAELQRDEAVGKALPIAIGVGIAVLAGLYFYLNSQY 157


Top