BLASTX nr result
ID: Coptis25_contig00023483
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00023483
(829 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_192706.5| CST complex subunit CTC1 [Arabidopsis thaliana]... 157 3e-52
sp|D0EL35.2|CTC1_ARATH RecName: Full=CST complex subunit CTC1; A... 157 3e-52
gb|ACX37401.1| conserved telomere maintenance component 1 [Arabi... 156 9e-52
ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cu... 184 2e-44
ref|XP_004141370.1| PREDICTED: CST complex subunit CTC1-like [Cu... 184 2e-44
>ref|NP_192706.5| CST complex subunit CTC1 [Arabidopsis thaliana]
gi|332657380|gb|AEE82780.1| CST complex subunit CTC1
[Arabidopsis thaliana]
Length = 1274
Score = 157 bits (398), Expect(2) = 3e-52
Identities = 76/158 (48%), Positives = 109/158 (68%)
Frame = -1
Query: 829 WLLLSDRLLAPLHPIRVGALICLRSIHLVRPKFPWTRMLLLGACFRTNINVKSFSPLESQ 650
WLLL+D++L H IR G+LI +R++H V KFPW +L+LGACF+T+I V+ FSP E+
Sbjct: 325 WLLLTDQILNRSHSIRTGSLIFIRNVHFVNTKFPWGEVLILGACFKTSITVEFFSPFETS 384
Query: 649 CYIRFQTQSMLGKFIESVTFSARFWLLLTISSFKKKFAGVFTEKEILGSKHKEGLAQMYA 470
C + Q+ L ++ES++F AR W LL SF +KF + ++KEIL S K+ L +MYA
Sbjct: 385 CLVDSCRQTSLSLYVESLSFPARLWTLLVRISF-EKFNRMPSDKEILRSCQKDELTKMYA 443
Query: 469 KSQLPSCVFRPRHGVFTEFCNHNLCGCDIDPNYNNLKL 356
+S++P +F+PR G+FTEFC H CGC+ + NLKL
Sbjct: 444 ESRIPPSMFQPRGGIFTEFCMHESCGCNSEARDCNLKL 481
Score = 74.3 bits (181), Expect(2) = 3e-52
Identities = 43/116 (37%), Positives = 69/116 (59%)
Frame = -2
Query: 360 NCVQVVPISSFISHCEAIWETVLVRMQNNRDTIMKNNFYYCEGKSYHRLMRRIMSSEDIG 181
N V+PISSF+ H + + +L +++ + + K Y+ + + SED G
Sbjct: 478 NLKLVMPISSFVHHVKVMLNELLSQIKKDFSASDCLSHSSSTWKRYNNTNPKTLRSEDTG 537
Query: 180 LVLMGTLQISPSSGRLQMVDASGSIDVVVPDLPSYYDINNVYEVKHYSVVIEGLPE 13
++L+G L+IS SSGRLQ+ D + SIDV+ PDL S + + + EV Y ++IEG+PE
Sbjct: 538 VILLGRLKIS-SSGRLQLHDRTSSIDVLTPDLLSDRNASRICEVPDYYLIIEGIPE 592
>sp|D0EL35.2|CTC1_ARATH RecName: Full=CST complex subunit CTC1; AltName: Full=Protein
CONSERVED TELOMERE MAINTENANCE COMPONENT 1; Short=AtCTC1
Length = 1272
Score = 157 bits (398), Expect(2) = 3e-52
Identities = 76/158 (48%), Positives = 109/158 (68%)
Frame = -1
Query: 829 WLLLSDRLLAPLHPIRVGALICLRSIHLVRPKFPWTRMLLLGACFRTNINVKSFSPLESQ 650
WLLL+D++L H IR G+LI +R++H V KFPW +L+LGACF+T+I V+ FSP E+
Sbjct: 325 WLLLTDQILNRSHSIRTGSLIFIRNVHFVNTKFPWGEVLILGACFKTSITVEFFSPFETS 384
Query: 649 CYIRFQTQSMLGKFIESVTFSARFWLLLTISSFKKKFAGVFTEKEILGSKHKEGLAQMYA 470
C + Q+ L ++ES++F AR W LL SF +KF + ++KEIL S K+ L +MYA
Sbjct: 385 CLVDSCRQTSLSLYVESLSFPARLWTLLVRISF-EKFNRMPSDKEILRSCQKDELTKMYA 443
Query: 469 KSQLPSCVFRPRHGVFTEFCNHNLCGCDIDPNYNNLKL 356
+S++P +F+PR G+FTEFC H CGC+ + NLKL
Sbjct: 444 ESRIPPSMFQPRGGIFTEFCMHESCGCNSEARDCNLKL 481
Score = 74.3 bits (181), Expect(2) = 3e-52
Identities = 43/116 (37%), Positives = 69/116 (59%)
Frame = -2
Query: 360 NCVQVVPISSFISHCEAIWETVLVRMQNNRDTIMKNNFYYCEGKSYHRLMRRIMSSEDIG 181
N V+PISSF+ H + + +L +++ + + K Y+ + + SED G
Sbjct: 478 NLKLVMPISSFVHHVKVMLNELLSQIKKDFSASDCLSHSSSTWKRYNNTNPKTLRSEDTG 537
Query: 180 LVLMGTLQISPSSGRLQMVDASGSIDVVVPDLPSYYDINNVYEVKHYSVVIEGLPE 13
++L+G L+IS SSGRLQ+ D + SIDV+ PDL S + + + EV Y ++IEG+PE
Sbjct: 538 VILLGRLKIS-SSGRLQLHDRTSSIDVLTPDLLSDRNASRICEVPDYYLIIEGIPE 592
>gb|ACX37401.1| conserved telomere maintenance component 1 [Arabidopsis thaliana]
Length = 1272
Score = 156 bits (394), Expect(2) = 9e-52
Identities = 75/158 (47%), Positives = 109/158 (68%)
Frame = -1
Query: 829 WLLLSDRLLAPLHPIRVGALICLRSIHLVRPKFPWTRMLLLGACFRTNINVKSFSPLESQ 650
WLLL+D++L H IR G+LI +R++H V KFPW +L+LGACF+T+I V+ FSP E+
Sbjct: 325 WLLLTDQILNRSHSIRTGSLIFIRNVHFVNTKFPWGEVLILGACFKTSITVEFFSPFETS 384
Query: 649 CYIRFQTQSMLGKFIESVTFSARFWLLLTISSFKKKFAGVFTEKEILGSKHKEGLAQMYA 470
C + Q+ L ++ES++F AR W LL SF +KF + ++KEIL S ++ L +MYA
Sbjct: 385 CLVDSCRQTSLSLYVESLSFPARLWTLLVRISF-EKFNRMPSDKEILRSCQEDELTKMYA 443
Query: 469 KSQLPSCVFRPRHGVFTEFCNHNLCGCDIDPNYNNLKL 356
+S++P +F+PR G+FTEFC H CGC+ + NLKL
Sbjct: 444 ESRIPPSMFQPRGGIFTEFCMHESCGCNSEARDCNLKL 481
Score = 74.3 bits (181), Expect(2) = 9e-52
Identities = 43/116 (37%), Positives = 69/116 (59%)
Frame = -2
Query: 360 NCVQVVPISSFISHCEAIWETVLVRMQNNRDTIMKNNFYYCEGKSYHRLMRRIMSSEDIG 181
N V+PISSF+ H + + +L +++ + + K Y+ + + SED G
Sbjct: 478 NLKLVMPISSFVHHVKVMLNELLSQIKKDFSASDCLSHSSSTWKRYNNTNPKTLRSEDTG 537
Query: 180 LVLMGTLQISPSSGRLQMVDASGSIDVVVPDLPSYYDINNVYEVKHYSVVIEGLPE 13
++L+G L+IS SSGRLQ+ D + SIDV+ PDL S + + + EV Y ++IEG+PE
Sbjct: 538 VILLGRLKIS-SSGRLQLHDRTSSIDVLTPDLLSDRNASRICEVPDYYLIIEGIPE 592
>ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus]
Length = 1362
Score = 184 bits (468), Expect = 2e-44
Identities = 88/168 (52%), Positives = 119/168 (70%)
Frame = -1
Query: 829 WLLLSDRLLAPLHPIRVGALICLRSIHLVRPKFPWTRMLLLGACFRTNINVKSFSPLESQ 650
W+LL+D L+P H IRVGA+I +R+ H V P+FPW+++LLLG C +T+I V+ FSPLE++
Sbjct: 362 WVLLTDHFLSPPHSIRVGAIISVRNAHFVNPRFPWSKLLLLGTCAKTSIFVQLFSPLETK 421
Query: 649 CYIRFQTQSMLGKFIESVTFSARFWLLLTISSFKKKFAGVFTEKEILGSKHKEGLAQMYA 470
C++ Q++SMLGKFI ++ FS R W+L ISSF+K FAG +EKEILGSKH EGL QMYA
Sbjct: 422 CHVLSQSRSMLGKFIPTLPFSTRLWVLFLISSFRKMFAGNLSEKEILGSKHNEGLVQMYA 481
Query: 469 KSQLPSCVFRPRHGVFTEFCNHNLCGCDIDPNYNNLKLRSGGSHLFFY 326
K LP ++R +HG + H+ CGC +P NL+ S L FY
Sbjct: 482 KLHLPMSMYRYQHGSMMKLYEHDSCGCASEPCNINLETVVPVSVLIFY 529
Score = 100 bits (250), Expect = 3e-19
Identities = 55/127 (43%), Positives = 80/127 (62%), Gaps = 8/127 (6%)
Frame = -2
Query: 360 NCVQVVPISSFISHCEAIWETVLVRMQNNRDTIMKNNFYYCE--------GKSYHRLMRR 205
N VVP+S I +C + T + M + +++ + + GKS H R+
Sbjct: 516 NLETVVPVSVLIFYCNS---TCMRTMSLKNEKVVQYEYNQLDHFRLLPRGGKSSHDTPRK 572
Query: 204 IMSSEDIGLVLMGTLQISPSSGRLQMVDASGSIDVVVPDLPSYYDINNVYEVKHYSVVIE 25
I SEDIG VL+G+L+IS SGRLQ+VDA+G IDV+VPDLPS +++N +YEV Y VVIE
Sbjct: 573 IYRSEDIGFVLVGSLKISTYSGRLQLVDATGGIDVMVPDLPSTWNVNGIYEVSKYIVVIE 632
Query: 24 GLPEEDE 4
G+P+ ++
Sbjct: 633 GIPQMEK 639
>ref|XP_004141370.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus]
Length = 1383
Score = 184 bits (468), Expect = 2e-44
Identities = 88/168 (52%), Positives = 119/168 (70%)
Frame = -1
Query: 829 WLLLSDRLLAPLHPIRVGALICLRSIHLVRPKFPWTRMLLLGACFRTNINVKSFSPLESQ 650
W+LL+D L+P H IRVGA+I +R+ H V P+FPW+++LLLG C +T+I V+ FSPLE++
Sbjct: 362 WVLLTDHFLSPPHSIRVGAIISVRNAHFVNPRFPWSKLLLLGTCAKTSIFVQLFSPLETK 421
Query: 649 CYIRFQTQSMLGKFIESVTFSARFWLLLTISSFKKKFAGVFTEKEILGSKHKEGLAQMYA 470
C++ Q++SMLGKFI ++ FS R W+L ISSF+K FAG +EKEILGSKH EGL QMYA
Sbjct: 422 CHVLSQSRSMLGKFIPTLPFSTRLWVLFLISSFRKMFAGNLSEKEILGSKHNEGLVQMYA 481
Query: 469 KSQLPSCVFRPRHGVFTEFCNHNLCGCDIDPNYNNLKLRSGGSHLFFY 326
K LP ++R +HG + H+ CGC +P NL+ S L FY
Sbjct: 482 KLHLPMSMYRYQHGSMMKLYEHDSCGCASEPCNINLETVVPVSVLIFY 529
Score = 100 bits (250), Expect = 3e-19
Identities = 55/127 (43%), Positives = 80/127 (62%), Gaps = 8/127 (6%)
Frame = -2
Query: 360 NCVQVVPISSFISHCEAIWETVLVRMQNNRDTIMKNNFYYCE--------GKSYHRLMRR 205
N VVP+S I +C + T + M + +++ + + GKS H R+
Sbjct: 516 NLETVVPVSVLIFYCNS---TCMRTMSLKNEKVVQYEYNQLDHFRLLPRGGKSSHDTPRK 572
Query: 204 IMSSEDIGLVLMGTLQISPSSGRLQMVDASGSIDVVVPDLPSYYDINNVYEVKHYSVVIE 25
I SEDIG VL+G+L+IS SGRLQ+VDA+G IDV+VPDLPS +++N +YEV Y VVIE
Sbjct: 573 IYRSEDIGFVLVGSLKISTYSGRLQLVDATGGIDVMVPDLPSTWNVNGIYEVSKYIVVIE 632
Query: 24 GLPEEDE 4
G+P+ ++
Sbjct: 633 GIPQMEK 639