BLASTX nr result

ID: Coptis25_contig00023480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023480
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330544.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_002264234.1| PREDICTED: uncharacterized protein LOC100249...   124   1e-26
emb|CAN70940.1| hypothetical protein VITISV_001966 [Vitis vinifera]   124   1e-26
ref|XP_002519626.1| conserved hypothetical protein [Ricinus comm...   118   4e-25
ref|XP_004156350.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   118   6e-25

>ref|XP_002330544.1| predicted protein [Populus trichocarpa] gi|222872102|gb|EEF09233.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score =  134 bits (336), Expect = 1e-29
 Identities = 62/101 (61%), Positives = 76/101 (75%)
 Frame = -2

Query: 303 TNPIIWCGAFCCVIFSVXXXXXXXXXXXXXLVVKPKYPLFILTSASLNSIYLDSAEYMNG 124
           TNP+IWCGA  C+IFS+             LV+KP+ P+F + +A+LNS+Y DS EY NG
Sbjct: 12  TNPVIWCGAILCLIFSLVLIIFGIATLIIYLVIKPRNPVFDIPNANLNSVYFDSPEYFNG 71

Query: 123 DFTFIANFSNPNRKMDVRFDYLDIELYFLDRLIATQALQSF 1
           D TF+ANFSNPNRK+DVRF+Y+DIELYF DRLI TQALQ F
Sbjct: 72  DLTFLANFSNPNRKIDVRFEYVDIELYFSDRLIGTQALQPF 112


>ref|XP_002264234.1| PREDICTED: uncharacterized protein LOC100249744 [Vitis vinifera]
          Length = 217

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/101 (57%), Positives = 72/101 (71%)
 Frame = -2

Query: 303 TNPIIWCGAFCCVIFSVXXXXXXXXXXXXXLVVKPKYPLFILTSASLNSIYLDSAEYMNG 124
           TNP++WC A  C+IFS+             LV+KPK PLF +   SL+S+Y DS EY NG
Sbjct: 31  TNPMVWCCAILCLIFSLILIFFGIATLIIFLVIKPKTPLFDIPGVSLSSVYFDSPEYFNG 90

Query: 123 DFTFIANFSNPNRKMDVRFDYLDIELYFLDRLIATQALQSF 1
           DFTF+ANFSNPNRK++VRF+Y+ IELYF DRLI TQ L+ F
Sbjct: 91  DFTFLANFSNPNRKINVRFEYVYIELYFFDRLIGTQTLEPF 131


>emb|CAN70940.1| hypothetical protein VITISV_001966 [Vitis vinifera]
          Length = 231

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/101 (57%), Positives = 72/101 (71%)
 Frame = -2

Query: 303 TNPIIWCGAFCCVIFSVXXXXXXXXXXXXXLVVKPKYPLFILTSASLNSIYLDSAEYMNG 124
           TNP++WC A  C+IFS+             LV+KPK PLF +   SL+S+Y DS EY NG
Sbjct: 45  TNPMVWCCAILCLIFSLLLIFFGIATLIIFLVIKPKTPLFDIPGVSLSSVYFDSPEYFNG 104

Query: 123 DFTFIANFSNPNRKMDVRFDYLDIELYFLDRLIATQALQSF 1
           DFTF+ANFSNPNRK++VRF+Y+ IELYF DRLI TQ L+ F
Sbjct: 105 DFTFLANFSNPNRKINVRFEYVYIELYFFDRLIGTQTLEPF 145


>ref|XP_002519626.1| conserved hypothetical protein [Ricinus communis]
           gi|223541216|gb|EEF42771.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 254

 Score =  118 bits (296), Expect = 4e-25
 Identities = 55/101 (54%), Positives = 70/101 (69%)
 Frame = -2

Query: 303 TNPIIWCGAFCCVIFSVXXXXXXXXXXXXXLVVKPKYPLFILTSASLNSIYLDSAEYMNG 124
           TNP++W GA  C+IFS+             L +KP+ P+F   +A+LN+IY DS EY NG
Sbjct: 68  TNPVVWFGAVLCLIFSLTLIFFGIATLIIYLAIKPRSPVFDTPNANLNNIYFDSPEYFNG 127

Query: 123 DFTFIANFSNPNRKMDVRFDYLDIELYFLDRLIATQALQSF 1
           D TF+ANFSNPN+K+DVRF+Y+ IELYF DRLI  Q LQ F
Sbjct: 128 DLTFLANFSNPNQKIDVRFEYVSIELYFFDRLIGIQTLQPF 168


>ref|XP_004156350.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229513 [Cucumis sativus]
          Length = 291

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/101 (54%), Positives = 74/101 (73%)
 Frame = -2

Query: 303 TNPIIWCGAFCCVIFSVXXXXXXXXXXXXXLVVKPKYPLFILTSASLNSIYLDSAEYMNG 124
           TNPIIWC AF C+ FS+             LV++P+ PLF + +ASL++IY D+ EY+NG
Sbjct: 105 TNPIIWCFAFLCLAFSLLLIFLGIATLIIFLVIRPRNPLFDIPNASLSTIYFDAPEYLNG 164

Query: 123 DFTFIANFSNPNRKMDVRFDYLDIELYFLDRLIATQALQSF 1
           DFT +ANF+NPN ++DVR++  DIEL+F DRLIATQA+Q F
Sbjct: 165 DFTILANFTNPNHRVDVRYENADIELFFGDRLIATQAIQPF 205


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