BLASTX nr result

ID: Coptis25_contig00023466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023466
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACR38196.1| unknown [Zea mays] gi|414876355|tpg|DAA53486.1| T...    58   7e-07
ref|NP_001144708.1| uncharacterized protein LOC100277744 [Zea ma...    58   7e-07
ref|XP_003568549.1| PREDICTED: uncharacterized protein LOC100838...    58   9e-07
dbj|BAK04545.1| predicted protein [Hordeum vulgare subsp. vulgare]     58   9e-07
ref|XP_002457376.1| hypothetical protein SORBIDRAFT_03g006240 [S...    58   9e-07

>gb|ACR38196.1| unknown [Zea mays] gi|414876355|tpg|DAA53486.1| TPA: hypothetical
           protein ZEAMMB73_579373 [Zea mays]
          Length = 191

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/27 (92%), Positives = 27/27 (100%)
 Frame = +2

Query: 2   IVIMEGNPHPGAVKGRMSFQSFNPSID 82
           IVIMEGNPHPGA+KGRMSFQ+FNPSID
Sbjct: 58  IVIMEGNPHPGAIKGRMSFQNFNPSID 84


>ref|NP_001144708.1| uncharacterized protein LOC100277744 [Zea mays]
           gi|195646098|gb|ACG42517.1| hypothetical protein [Zea
           mays]
          Length = 191

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/27 (92%), Positives = 27/27 (100%)
 Frame = +2

Query: 2   IVIMEGNPHPGAVKGRMSFQSFNPSID 82
           IVIMEGNPHPGA+KGRMSFQ+FNPSID
Sbjct: 58  IVIMEGNPHPGAIKGRMSFQNFNPSID 84


>ref|XP_003568549.1| PREDICTED: uncharacterized protein LOC100838897 [Brachypodium
           distachyon]
          Length = 197

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/27 (88%), Positives = 27/27 (100%)
 Frame = +2

Query: 2   IVIMEGNPHPGAVKGRMSFQSFNPSID 82
           +V+MEGNPHPGAVKGRMSFQ+FNPSID
Sbjct: 60  VVVMEGNPHPGAVKGRMSFQNFNPSID 86


>dbj|BAK04545.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 202

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/27 (88%), Positives = 27/27 (100%)
 Frame = +2

Query: 2   IVIMEGNPHPGAVKGRMSFQSFNPSID 82
           +V+MEGNPHPGAVKGRMSFQ+FNPSID
Sbjct: 65  VVVMEGNPHPGAVKGRMSFQNFNPSID 91


>ref|XP_002457376.1| hypothetical protein SORBIDRAFT_03g006240 [Sorghum bicolor]
           gi|241929351|gb|EES02496.1| hypothetical protein
           SORBIDRAFT_03g006240 [Sorghum bicolor]
          Length = 183

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/27 (88%), Positives = 27/27 (100%)
 Frame = +2

Query: 2   IVIMEGNPHPGAVKGRMSFQSFNPSID 82
           +VIMEGNPHPGA+KGRMSFQ+FNPSID
Sbjct: 57  VVIMEGNPHPGAIKGRMSFQNFNPSID 83


Top