BLASTX nr result
ID: Coptis25_contig00023459
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00023459
(1033 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containi... 516 e-144
ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containi... 468 e-130
ref|XP_002322628.1| predicted protein [Populus trichocarpa] gi|2... 468 e-129
ref|XP_003589755.1| Pentatricopeptide repeat-containing protein ... 456 e-126
ref|NP_181048.1| pentatricopeptide repeat-containing protein [Ar... 449 e-124
>ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 516 bits (1330), Expect = e-144
Identities = 254/344 (73%), Positives = 293/344 (85%), Gaps = 3/344 (0%)
Frame = +1
Query: 1 DVVTWTTVISGYIKCGMIREARLLFEEAGAKKNVVTWTAMLAGYIRSKQIMEAENLFARM 180
DV+TWTTVISGYIKCGMI EAR LF+ AKKNVVTWTAM+ GYIRS +I +AE LF M
Sbjct: 82 DVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEM 141
Query: 181 PEKNVVSWNTMISGYVQNNRIDEAIKLFEKMPDRNVVSSNTIVTALAISGRIYEARRVFD 360
P KNVVSWNTMI GY QN RID A+ LFEKMP+RNVVS NT+++ LA GRI EARR+FD
Sbjct: 142 PNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFD 201
Query: 361 MMPQRDVISWTAMVTGLSQNGRIDEARELFELMPERNVVSWNAMITGYAQNLRLDEALDL 540
MP+RDVISWTAM+ GLS+NGRIDEAR LF+ MPERNVVSWNAMITGYAQNLRLDEALDL
Sbjct: 202 RMPERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDL 261
Query: 541 FEVMPERDLPSWNTMITGFIQNGDVTRARKLFNEMHERNVVTWTTLIMGYVQDGQSEEAL 720
FE MPERDLPSWNTMITG IQNGD+ RARKLFNEM ++NV++WTT+I G VQ+G+SEEAL
Sbjct: 262 FERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEAL 321
Query: 721 RIFSGM-QAEGIKPNQGTFVCILNACCDLAGLSEGKQIHQIISKTVYQNSAFVESALLNM 897
+IFS M G KPNQGTFV +L AC +LAGL EG+Q+HQIISKTVYQ+S FV SAL+NM
Sbjct: 322 KIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINM 381
Query: 898 YSKCGELSIAKEMFN--RSTQRDLVTWNTMIGAYAHHGWGREAI 1023
YSKCGEL A++MF+ ++QRDLV+WN +I AYAHHG+G+EAI
Sbjct: 382 YSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAI 425
Score = 163 bits (413), Expect = 6e-38
Identities = 93/251 (37%), Positives = 148/251 (58%), Gaps = 3/251 (1%)
Frame = +1
Query: 277 DRNVVSSNTIVTALAISGRIYEARRVFDMMPQRDVISWTAMVTGLSQNGRIDEARELFEL 456
D NV N ++T L+ GRI EARR+FD M + DVI+WT +++G + G I+EAR LF+
Sbjct: 49 DGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDR 108
Query: 457 M-PERNVVSWNAMITGYAQNLRLDEALDLFEVMPERDLPSWNTMITGFIQNGDVTRARKL 633
+ ++NVV+W AM+ GY ++ ++ +A LF MP +++ SWNTMI G+ QNG + A L
Sbjct: 109 VDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYL 168
Query: 634 FNEMHERNVVTWTTLIMGYVQDGQSEEALRIFSGMQAEGIKPNQGTFVCILNACCDLAGL 813
F +M ERNVV+W T++ Q G+ EEA R+F M +++ +AGL
Sbjct: 169 FEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERD----------VISWTAMIAGL 218
Query: 814 SEGKQIHQ--IISKTVYQNSAFVESALLNMYSKCGELSIAKEMFNRSTQRDLVTWNTMIG 987
S+ +I + ++ + + + +A++ Y++ L A ++F R +RDL +WNTMI
Sbjct: 219 SKNGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMIT 278
Query: 988 AYAHHGWGREA 1020
+G R A
Sbjct: 279 GLIQNGDLRRA 289
Score = 115 bits (289), Expect = 1e-23
Identities = 66/212 (31%), Positives = 115/212 (54%), Gaps = 1/212 (0%)
Frame = +1
Query: 397 MVTGLSQNGRIDEARELFELMPERNVVSWNAMITGYAQNLRLDEALDLFE-VMPERDLPS 573
M+T LS++GRI EAR LF+ M E +V++W +I+GY + ++EA LF+ V ++++ +
Sbjct: 58 MITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVT 117
Query: 574 WNTMITGFIQNGDVTRARKLFNEMHERNVVTWTTLIMGYVQDGQSEEALRIFSGMQAEGI 753
W M+ G+I++ ++ A KLFNEM +NVV+W T+I GY Q+G+ + A+ +F M +
Sbjct: 118 WTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNV 177
Query: 754 KPNQGTFVCILNACCDLAGLSEGKQIHQIISKTVYQNSAFVESALLNMYSKCGELSIAKE 933
V N+ +++M ++CG + A+
Sbjct: 178 ---------------------------------VSWNT------VMSMLAQCGRIEEARR 198
Query: 934 MFNRSTQRDLVTWNTMIGAYAHHGWGREAILL 1029
+F+R +RD+++W MI + +G EA LL
Sbjct: 199 LFDRMPERDVISWTAMIAGLSKNGRIDEARLL 230
>ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Glycine max]
Length = 581
Score = 468 bits (1205), Expect = e-130
Identities = 227/346 (65%), Positives = 278/346 (80%), Gaps = 3/346 (0%)
Frame = +1
Query: 1 DVVTWTTVISGYIKCGMIREARLLFEEAGAKKNVVTWTAMLAGYIRSKQIMEAENLFARM 180
D+ WTT+I+GY+KCGMIREAR LF+ AKKNVVTWTAM+ GYI+ Q+ EAE LF M
Sbjct: 31 DIGLWTTMITGYLKCGMIREARKLFDRWDAKKNVVTWTAMVNGYIKFNQVKEAERLFYEM 90
Query: 181 PEKNVVSWNTMISGYVQNNRIDEAIKLFEKMPDRNVVSSNTIVTALAISGRIYEARRVFD 360
P +NVVSWNTM+ GY +N +A+ LF +MP+RNVVS NTI+TAL GRI +A+R+FD
Sbjct: 91 PLRNVVSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWNTIITALVQCGRIEDAQRLFD 150
Query: 361 MMPQRDVISWTAMVTGLSQNGRIDEARELFELMPERNVVSWNAMITGYAQNLRLDEALDL 540
M RDV+SWT MV GL++NGR+++AR LF+ MP RNVVSWNAMITGYAQN RLDEAL L
Sbjct: 151 QMKDRDVVSWTTMVAGLAKNGRVEDARALFDQMPVRNVVSWNAMITGYAQNRRLDEALQL 210
Query: 541 FEVMPERDLPSWNTMITGFIQNGDVTRARKLFNEMHERNVVTWTTLIMGYVQDGQSEEAL 720
F+ MPERD+PSWNTMITGFIQNG++ RA KLF EM E+NV+TWT ++ GYVQ G SEEAL
Sbjct: 211 FQRMPERDMPSWNTMITGFIQNGELNRAEKLFGEMQEKNVITWTAMMTGYVQHGLSEEAL 270
Query: 721 RIFSGMQAEG-IKPNQGTFVCILNACCDLAGLSEGKQIHQIISKTVYQNSAFVESALLNM 897
R+F M A +KPN GTFV +L AC DLAGL+EG+QIHQ+ISKTV+Q+S V SAL+NM
Sbjct: 271 RVFIKMLATNELKPNTGTFVTVLGACSDLAGLTEGQQIHQMISKTVFQDSTCVVSALINM 330
Query: 898 YSKCGELSIAKEMFNRS--TQRDLVTWNTMIGAYAHHGWGREAILL 1029
YSKCGEL A++MF+ +QRDL++WN MI AYAHHG+G+EAI L
Sbjct: 331 YSKCGELHTARKMFDDGLLSQRDLISWNGMIAAYAHHGYGKEAINL 376
Score = 180 bits (457), Expect = 4e-43
Identities = 97/274 (35%), Positives = 161/274 (58%), Gaps = 1/274 (0%)
Frame = +1
Query: 205 NTMISGYVQNNRIDEAIKLFEKMPDRNVVSSNTIVTALAISGRIYEARRVFDMM-PQRDV 381
N IS + ID A K+FE+MP+R++ T++T G I EAR++FD +++V
Sbjct: 5 NLFISRLCREGEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDAKKNV 64
Query: 382 ISWTAMVTGLSQNGRIDEARELFELMPERNVVSWNAMITGYAQNLRLDEALDLFEVMPER 561
++WTAMV G + ++ EA LF MP RNVVSWN M+ GYA+N +ALDLF MPER
Sbjct: 65 VTWTAMVNGYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMPER 124
Query: 562 DLPSWNTMITGFIQNGDVTRARKLFNEMHERNVVTWTTLIMGYVQDGQSEEALRIFSGMQ 741
++ SWNT+IT +Q G + A++LF++M +R+VV+WTT++ G ++G+ E+A +F M
Sbjct: 125 NVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVEDARALFDQMP 184
Query: 742 AEGIKPNQGTFVCILNACCDLAGLSEGKQIHQIISKTVYQNSAFVESALLNMYSKCGELS 921
N ++ ++ L E Q+ Q + + + + ++ + + GEL+
Sbjct: 185 VR----NVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPS----WNTMITGFIQNGELN 236
Query: 922 IAKEMFNRSTQRDLVTWNTMIGAYAHHGWGREAI 1023
A+++F +++++TW M+ Y HG EA+
Sbjct: 237 RAEKLFGEMQEKNVITWTAMMTGYVQHGLSEEAL 270
>ref|XP_002322628.1| predicted protein [Populus trichocarpa] gi|222867258|gb|EEF04389.1|
predicted protein [Populus trichocarpa]
Length = 559
Score = 468 bits (1203), Expect = e-129
Identities = 229/346 (66%), Positives = 284/346 (82%), Gaps = 3/346 (0%)
Frame = +1
Query: 1 DVVTWTTVISGYIKCGMIREARLLFEEAGAKKNVVTWTAMLAGYIRSKQIMEAENLFARM 180
DVVTWT VISGYIKCG+I +AR LF+ A K+VVTWTAML+GY+R K+I EAE LF M
Sbjct: 5 DVVTWTAVISGYIKCGLIVDARRLFDRVDAIKDVVTWTAMLSGYVRLKRIEEAERLFEVM 64
Query: 181 PEKNVVSWNTMISGYVQNNRIDEAIKLFEKMPDRNVVSSNTIVTALAISGRIYEARRVFD 360
P KNVVSWNTMI GY +N +D+AI++FE+M +RN+VS N ++ AL GR+ EARR FD
Sbjct: 65 PVKNVVSWNTMIDGYGKNREVDKAIEVFERMHERNMVSWNAVIAALVQCGRVEEARRRFD 124
Query: 361 MMPQRDVISWTAMVTGLSQNGRIDEARELFELMPERNVVSWNAMITGYAQNLRLDEALDL 540
MP+RDVISWT MV GL+++GR+DEAR++F+ MPERNVVSWNAM+TGYA+N+RLDEA DL
Sbjct: 125 EMPKRDVISWTTMVMGLARSGRVDEARKVFDRMPERNVVSWNAMVTGYAKNMRLDEAFDL 184
Query: 541 FEVMPERDLPSWNTMITGFIQNGDVTRARKLFNEMHERNVVTWTTLIMGYVQDGQSEEAL 720
FE MPER+L SWNTMITGFIQNG++ ARK+FNEM E+NVV+WTT+I GYVQ+G+SE AL
Sbjct: 185 FERMPERNLSSWNTMITGFIQNGELAWARKVFNEMPEKNVVSWTTMITGYVQEGESESAL 244
Query: 721 RIFSGMQAE-GIKPNQGTFVCILNACCDLAGLSEGKQIHQIISKTVYQNSAFVESALLNM 897
++F M + G +PN+GTFV +L AC D+AGL EG+Q+H +ISK+VYQ+ FV SALLNM
Sbjct: 245 KVFVEMIKDGGARPNEGTFVNVLGACSDMAGLGEGQQVHLLISKSVYQDRTFVASALLNM 304
Query: 898 YSKCGELSIAKEMFNR--STQRDLVTWNTMIGAYAHHGWGREAILL 1029
YSKCGELSIA+++F+ +QRDLV WN MI AYAHHG G EAI L
Sbjct: 305 YSKCGELSIARKIFDDVVISQRDLVLWNGMIAAYAHHGCGMEAIEL 350
Score = 139 bits (349), Expect = 1e-30
Identities = 78/254 (30%), Positives = 137/254 (53%), Gaps = 34/254 (13%)
Frame = +1
Query: 364 MPQRDVISWTAMVTGLSQNG--------------------------------RIDEAREL 447
M +RDV++WTA+++G + G RI+EA L
Sbjct: 1 MHERDVVTWTAVISGYIKCGLIVDARRLFDRVDAIKDVVTWTAMLSGYVRLKRIEEAERL 60
Query: 448 FELMPERNVVSWNAMITGYAQNLRLDEALDLFEVMPERDLPSWNTMITGFIQNGDVTRAR 627
FE+MP +NVVSWN MI GY +N +D+A+++FE M ER++ SWN +I +Q G V AR
Sbjct: 61 FEVMPVKNVVSWNTMIDGYGKNREVDKAIEVFERMHERNMVSWNAVIAALVQCGRVEEAR 120
Query: 628 KLFNEMHERNVVTWTTLIMGYVQDGQSEEALRIFSGMQAEGIKPNQGTFVCILNACCDLA 807
+ F+EM +R+V++WTT++MG + G+ +EA ++F M V NA +
Sbjct: 121 RRFDEMPKRDVISWTTMVMGLARSGRVDEARKVFDRMPERN--------VVSWNAM--VT 170
Query: 808 GLSEGKQIHQI--ISKTVYQNSAFVESALLNMYSKCGELSIAKEMFNRSTQRDLVTWNTM 981
G ++ ++ + + + + + + + ++ + + GEL+ A+++FN ++++V+W TM
Sbjct: 171 GYAKNMRLDEAFDLFERMPERNLSSWNTMITGFIQNGELAWARKVFNEMPEKNVVSWTTM 230
Query: 982 IGAYAHHGWGREAI 1023
I Y G A+
Sbjct: 231 ITGYVQEGESESAL 244
>ref|XP_003589755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478803|gb|AES60006.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 891
Score = 456 bits (1173), Expect = e-126
Identities = 221/346 (63%), Positives = 274/346 (79%), Gaps = 3/346 (0%)
Frame = +1
Query: 1 DVVTWTTVISGYIKCGMIREARLLFEEAGAKKNVVTWTAMLAGYIRSKQIMEAENLFARM 180
D WTT+ISGYIKCG+I EAR LF+ A+K+V+ WTAM++GYI+ +I EAE LF M
Sbjct: 75 DSCLWTTMISGYIKCGLINEARKLFDRPDAQKSVIVWTAMVSGYIKMNRIEEAERLFNEM 134
Query: 181 PEKNVVSWNTMISGYVQNNRIDEAIKLFEKMPDRNVVSSNTIVTALAISGRIYEARRVFD 360
P +NVVSWNTMI GY +N R EA+ LF +MP+RNVVS NT++TALA GRI +A R+F+
Sbjct: 135 PVRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNVVSWNTVMTALAHCGRIDDAERLFN 194
Query: 361 MMPQRDVISWTAMVTGLSQNGRIDEARELFELMPERNVVSWNAMITGYAQNLRLDEALDL 540
M +RDV+SWT MV GLS+NGR+D ARE+F+ MP RNVVSWNAMI GYAQN R DEAL L
Sbjct: 195 EMRERDVVSWTTMVAGLSKNGRVDAAREVFDKMPIRNVVSWNAMIAGYAQNGRFDEALKL 254
Query: 541 FEVMPERDLPSWNTMITGFIQNGDVTRARKLFNEMHERNVVTWTTLIMGYVQDGQSEEAL 720
FE MPERD+PSWNTM+TGFIQNGD+ RA +LF+ M ++NV+TWT ++ GYVQ G SEEAL
Sbjct: 255 FERMPERDMPSWNTMVTGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEAL 314
Query: 721 RIFSGMQA-EGIKPNQGTFVCILNACCDLAGLSEGKQIHQIISKTVYQNSAFVESALLNM 897
++F+ MQA +G+KP GTFV +L AC DLAGL EG+QIHQ+ISKTV+Q S +V SAL+NM
Sbjct: 315 KLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINM 374
Query: 898 YSKCGELSIAKEMFN--RSTQRDLVTWNTMIGAYAHHGWGREAILL 1029
YSKCG+ +AK+MF+ S DL+ WN MI AYAHHG+G EAI L
Sbjct: 375 YSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAINL 420
Score = 177 bits (448), Expect = 5e-42
Identities = 101/278 (36%), Positives = 160/278 (57%), Gaps = 3/278 (1%)
Frame = +1
Query: 205 NTMISGYVQNNRIDEAIKLFEKMPDRNVVSSNTIVTALAISGRIYEARRVFDMM-PQRDV 381
N IS + +++EA K+F++M R+ T+++ G I EAR++FD Q+ V
Sbjct: 49 NYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSV 108
Query: 382 ISWTAMVTGLSQNGRIDEARELFELMPERNVVSWNAMITGYAQNLRLDEALDLFEVMPER 561
I WTAMV+G + RI+EA LF MP RNVVSWN MI GYA+N R EALDLF MPER
Sbjct: 109 IVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPER 168
Query: 562 DLPSWNTMITGFIQNGDVTRARKLFNEMHERNVVTWTTLIMGYVQDGQSEEALRIFSGMQ 741
++ SWNT++T G + A +LFNEM ER+VV+WTT++ G ++G+ + A +F M
Sbjct: 169 NVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFDKMP 228
Query: 742 AEGIKPNQGTFVCILNACCDLAGLSEGKQIHQIIS--KTVYQNSAFVESALLNMYSKCGE 915
V NA +AG ++ + + + + + + + ++ + + G+
Sbjct: 229 IRN--------VVSWNAM--IAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGD 278
Query: 916 LSIAKEMFNRSTQRDLVTWNTMIGAYAHHGWGREAILL 1029
L+ A+++F+ Q++++TW M+ Y HG EA+ L
Sbjct: 279 LNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEALKL 316
Score = 102 bits (253), Expect = 2e-19
Identities = 86/342 (25%), Positives = 144/342 (42%), Gaps = 86/342 (25%)
Frame = +1
Query: 1 DVVTWTTVISGYIKCGMIREARLLFEEAGAKKNVVTWTAMLAGYIRSKQIMEAENLFARM 180
+VV+W +I+GY + G EA LFE ++++ +W M+ G+I++ + AE LF M
Sbjct: 231 NVVSWNAMIAGYAQNGRFDEALKLFERM-PERDMPSWNTMVTGFIQNGDLNRAEQLFHAM 289
Query: 181 PEKNVVSWNTMISGYVQNNRIDEAIKLFEKMP---------------------------- 276
P+KNV++W M++GYVQ+ +EA+KLF KM
Sbjct: 290 PQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEG 349
Query: 277 -------DRNVVSSNTIVTALAIS-----GRIYEARRVFD--MMPQRDVISWTAMVTGLS 414
+ V +T V + I+ G + A+++FD + D+I+W M+ +
Sbjct: 350 QQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYA 409
Query: 415 QNGRIDEARELFELMPE----RNVVSWNAMITG------------YAQNL---------- 516
+G +EA LF M E N V++ ++T Y L
Sbjct: 410 HHGYGNEAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRYIQVRE 469
Query: 517 --------------RLDEALDLFEVM-PERDLPSWNTMITGFIQNGDVTRARKLFNE--- 642
RLDEAL++ E + E L W ++ G +G+ + + ++
Sbjct: 470 DHYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSLWGALLAGCSVHGNADIGKLVADKVLK 529
Query: 643 MHERNVVTWTTLIMGYVQDGQSEEALRIFSGMQAEGIKPNQG 768
M N T+ Y G EEA + M+ +G+K G
Sbjct: 530 MEPENADTYLLASNMYASVGMREEAANVRMKMKKKGLKKQPG 571
>ref|NP_181048.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099187|sp|O64766.1|PP185_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g35030, mitochondrial; Flags: Precursor
gi|3033399|gb|AAC12843.1| hypothetical protein
[Arabidopsis thaliana] gi|209414526|gb|ACI46503.1|
At2g35030 [Arabidopsis thaliana]
gi|330253957|gb|AEC09051.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 449 bits (1156), Expect = e-124
Identities = 217/344 (63%), Positives = 280/344 (81%), Gaps = 3/344 (0%)
Frame = +1
Query: 1 DVVTWTTVISGYIKCGMIREARLLFEEAGAKKNVVTWTAMLAGYIRSKQIMEAENLFARM 180
DVVTWT VI+GYIK G +REAR LF+ ++KNVVTWTAM++GY+RSKQ+ AE LF M
Sbjct: 76 DVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEM 135
Query: 181 PEKNVVSWNTMISGYVQNNRIDEAIKLFEKMPDRNVVSSNTIVTALAISGRIYEARRVFD 360
PE+NVVSWNTMI GY Q+ RID+A++LF++MP+RN+VS N++V AL GRI EA +F+
Sbjct: 136 PERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFE 195
Query: 361 MMPQRDVISWTAMVTGLSQNGRIDEARELFELMPERNVVSWNAMITGYAQNLRLDEALDL 540
MP+RDV+SWTAMV GL++NG++DEAR LF+ MPERN++SWNAMITGYAQN R+DEA L
Sbjct: 196 RMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQL 255
Query: 541 FEVMPERDLPSWNTMITGFIQNGDVTRARKLFNEMHERNVVTWTTLIMGYVQDGQSEEAL 720
F+VMPERD SWNTMITGFI+N ++ +A LF+ M E+NV++WTT+I GYV++ ++EEAL
Sbjct: 256 FQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEAL 315
Query: 721 RIFSGMQAEG-IKPNQGTFVCILNACCDLAGLSEGKQIHQIISKTVYQNSAFVESALLNM 897
+FS M +G +KPN GT+V IL+AC DLAGL EG+QIHQ+ISK+V+Q + V SALLNM
Sbjct: 316 NVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNM 375
Query: 898 YSKCGELSIAKEMFNRS--TQRDLVTWNTMIGAYAHHGWGREAI 1023
YSK GEL A++MF+ QRDL++WN+MI YAHHG G+EAI
Sbjct: 376 YSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAI 419
Score = 157 bits (396), Expect = 5e-36
Identities = 92/301 (30%), Positives = 162/301 (53%), Gaps = 41/301 (13%)
Frame = +1
Query: 244 DEAIKLFEKMPDRNVVSSNT---------IVTALAISGRIYEARRVFDMMPQRDVISWTA 396
D +++LF + R++ SS++ ++ L G+I EAR++FD +P+RDV++WT
Sbjct: 25 DRSVQLFNLV--RSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTH 82
Query: 397 MVTGLSQNGRIDEARELFEL--------------------------------MPERNVVS 480
++TG + G + EARELF+ MPERNVVS
Sbjct: 83 VITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVS 142
Query: 481 WNAMITGYAQNLRLDEALDLFEVMPERDLPSWNTMITGFIQNGDVTRARKLFNEMHERNV 660
WN MI GYAQ+ R+D+AL+LF+ MPER++ SWN+M+ +Q G + A LF M R+V
Sbjct: 143 WNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV 202
Query: 661 VTWTTLIMGYVQDGQSEEALRIFSGMQAEGIKPNQGTFVCILNACCDLAGLSEGKQIHQI 840
V+WT ++ G ++G+ +EA R+F M I ++ ++ + E Q+ Q+
Sbjct: 203 VSWTAMVDGLAKNGKVDEARRLFDCMPERNII----SWNAMITGYAQNNRIDEADQLFQV 258
Query: 841 ISKTVYQNSAFVESALLNMYSKCGELSIAKEMFNRSTQRDLVTWNTMIGAYAHHGWGREA 1020
+ + + + + ++ + + E++ A +F+R ++++++W TMI Y + EA
Sbjct: 259 MPERDFAS----WNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEA 314
Query: 1021 I 1023
+
Sbjct: 315 L 315
Score = 76.6 bits (187), Expect = 9e-12
Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 1/172 (0%)
Frame = +1
Query: 517 RLDEALDLFEVMPERDLPSWNTMITGFIQNGDVTRARKLFNEMHER-NVVTWTTLIMGYV 693
++ EA LF+ +PERD+ +W +ITG+I+ GD+ AR+LF+ + R NVVTWT ++ GY+
Sbjct: 61 KIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYL 120
Query: 694 QDGQSEEALRIFSGMQAEGIKPNQGTFVCILNACCDLAGLSEGKQIHQIISKTVYQNSAF 873
+ Q A +F M + V N+
Sbjct: 121 RSKQLSIAEMLFQEMPERNV---------------------------------VSWNT-- 145
Query: 874 VESALLNMYSKCGELSIAKEMFNRSTQRDLVTWNTMIGAYAHHGWGREAILL 1029
+++ Y++ G + A E+F+ +R++V+WN+M+ A G EA+ L
Sbjct: 146 ----MIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNL 193