BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023454
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95319.1| retrotransposon protein, putative, unclassified [...   177   1e-42
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]     174   8e-42
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]        174   8e-42
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...   172   6e-41
ref|NP_001175365.1| Os08g0123950 [Oryza sativa Japonica Group] g...   163   3e-38

>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score =  177 bits (449), Expect = 1e-42
 Identities = 88/179 (49%), Positives = 112/179 (62%)
 Frame = -1

Query: 590  EVHQFLEERKSTMXXXXXXXXXXXXRMKFYADKHRTERVFAVGDWVYLRLQPYRQTTLAM 411
            E    LEE+++ +            RMK+YAD++RTER   VGD VYL+LQPYRQ    +
Sbjct: 777  EARVTLEEKETIVQKLKASMEDAQRRMKYYADRNRTERKLEVGDMVYLKLQPYRQNAFGI 836

Query: 410  RRNLKLAPKYFGPYKIIEKIGLVAYKLDLPTTSAVHPVFHVSLLKKKIGEDVNPVLQLAP 231
            R +LKL  KY+GP+K++EK+G VAY+L LP  +A+HPVFHVS LKK +G    P+  L  
Sbjct: 837  RGSLKLRGKYYGPFKVLEKVGAVAYRLQLPEEAAIHPVFHVSQLKKHLGTHAVPMPNLPA 896

Query: 230  TNDQGQFLVEPIAVLDRRMVQRRARAATQVLVQWFNTQPAEATWEDYDKVLAQFPNFDP 54
                GQ   EP+AVL RRM+ R   A TQ L+ W N  PAEATWED   +   FPNF P
Sbjct: 897  VGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLTPAEATWEDASYIQKVFPNFQP 955


>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1475

 Score =  174 bits (442), Expect = 8e-42
 Identities = 85/179 (47%), Positives = 116/179 (64%)
 Frame = -1

Query: 590  EVHQFLEERKSTMXXXXXXXXXXXXRMKFYADKHRTERVFAVGDWVYLRLQPYRQTTLAM 411
            E    +EE+++ +            RMK++ADK+RTER   VGD VYL+L+PYRQ+   +
Sbjct: 1297 EARVTIEEKEAILNKLKNSLADAQHRMKYFADKNRTERNLEVGDMVYLKLKPYRQSAFGI 1356

Query: 410  RRNLKLAPKYFGPYKIIEKIGLVAYKLDLPTTSAVHPVFHVSLLKKKIGEDVNPVLQLAP 231
            R +LKL  K++GP+K+++KIG +AYKL LP  + +HPVFHVS LKK +G+   P+  L  
Sbjct: 1357 RGSLKLRSKFYGPFKVLQKIGQLAYKLQLPDDAQIHPVFHVSQLKKHLGKHAIPMSNLPS 1416

Query: 230  TNDQGQFLVEPIAVLDRRMVQRRARAATQVLVQWFNTQPAEATWEDYDKVLAQFPNFDP 54
                GQ   EP+AVL RRMV R+  A TQ L+ W N  PAEATWED   + A FP+F+P
Sbjct: 1417 VGPDGQIKTEPLAVLQRRMVPRKGVAVTQWLILWQNLSPAEATWEDASVIQAMFPSFNP 1475


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score =  174 bits (442), Expect = 8e-42
 Identities = 84/153 (54%), Positives = 105/153 (68%)
 Frame = -1

Query: 512  MKFYADKHRTERVFAVGDWVYLRLQPYRQTTLAMRRNLKLAPKYFGPYKIIEKIGLVAYK 333
            +K YAD++R+ER  AVGD VYL+LQPYRQT   +R +LKL  K++GP+KI+EK+G VAYK
Sbjct: 1434 IKHYADRNRSERTLAVGDMVYLKLQPYRQTAFGIRGSLKLRSKFYGPFKIMEKVGRVAYK 1493

Query: 332  LDLPTTSAVHPVFHVSLLKKKIGEDVNPVLQLAPTNDQGQFLVEPIAVLDRRMVQRRARA 153
            L LP  S +HPVFHVS LKK IG    P+  L      GQ   EP+AVL RRM+ R   A
Sbjct: 1494 LQLPEGSNIHPVFHVSQLKKHIGSRAVPMANLPSVGPDGQIKTEPVAVLKRRMIPRGGVA 1553

Query: 152  ATQVLVQWFNTQPAEATWEDYDKVLAQFPNFDP 54
             TQ LV W N  P+EATWED   + + FP+F+P
Sbjct: 1554 VTQWLVLWHNLSPSEATWEDASMIQSMFPSFNP 1586


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score =  172 bits (435), Expect = 6e-41
 Identities = 83/153 (54%), Positives = 101/153 (66%)
 Frame = -1

Query: 512  MKFYADKHRTERVFAVGDWVYLRLQPYRQTTLAMRRNLKLAPKYFGPYKIIEKIGLVAYK 333
            +KFYADK R+ER   +GD VYL+LQPYRQ  + +R +LKL  KY+GP+K+IEK+G VAYK
Sbjct: 1459 IKFYADKGRSERTLELGDMVYLKLQPYRQVAMGIRGSLKLRSKYYGPFKVIEKMGAVAYK 1518

Query: 332  LDLPTTSAVHPVFHVSLLKKKIGEDVNPVLQLAPTNDQGQFLVEPIAVLDRRMVQRRARA 153
            L LP  + +HPVFHVS LKK +G    P+  L      GQ   EP AVL RRM+ R    
Sbjct: 1519 LQLPDGAGIHPVFHVSQLKKHLGARAIPMPNLPAIGPDGQIKTEPAAVLQRRMIPRHNEP 1578

Query: 152  ATQVLVQWFNTQPAEATWEDYDKVLAQFPNFDP 54
             TQ L+ W N  PAEATWED   + A FPNF P
Sbjct: 1579 VTQWLILWENLTPAEATWEDASYIQAAFPNFQP 1611


>ref|NP_001175365.1| Os08g0123950 [Oryza sativa Japonica Group]
            gi|255678117|dbj|BAH94093.1| Os08g0123950, partial [Oryza
            sativa Japonica Group]
          Length = 783

 Score =  163 bits (412), Expect = 3e-38
 Identities = 88/194 (45%), Positives = 121/194 (62%)
 Frame = -1

Query: 596  NPEVHQFLEERKSTMXXXXXXXXXXXXRMKFYADKHRTERVFAVGDWVYLRLQPYRQTTL 417
            N E+  ++++RK               +MK +ADK R+ R F VG+WVYL+LQPY Q+++
Sbjct: 528  NSELITWMQDRKLMQQLVQQHLHRAQQQMKLFADKKRSFRQFQVGEWVYLKLQPYVQSSV 587

Query: 416  AMRRNLKLAPKYFGPYKIIEKIGLVAYKLDLPTTSAVHPVFHVSLLKKKIGEDVNPVLQL 237
            A R N KLA KYFGP++I+EK+G VAYKL LP TS++HPVFHVSLLK+  G   +    L
Sbjct: 588  APRANHKLAFKYFGPFQILEKLGTVAYKLQLPATSSIHPVFHVSLLKEAKGFQPSVHTPL 647

Query: 236  APTNDQGQFLVEPIAVLDRRMVQRRARAATQVLVQWFNTQPAEATWEDYDKVLAQFPNFD 57
            +PT    Q+   PIA+LD R+ ++      QVL  W +T PA+ATWED   + A+FPN  
Sbjct: 648  SPTYSAVQY---PIALLDHRLTKKGNHTVHQVLTHWSDTIPAQATWEDLHDLKARFPNAL 704

Query: 56   P*GQGSFEEKCYVR 15
              GQ   + +  VR
Sbjct: 705  AWGQAKTQGEGIVR 718