BLASTX nr result

ID: Coptis25_contig00023448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023448
         (717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522268.1| conserved hypothetical protein [Ricinus comm...   414   e-113
emb|CBI30727.3| unnamed protein product [Vitis vinifera]              402   e-110
ref|XP_002265152.2| PREDICTED: uncharacterized protein LOC100265...   400   e-109
ref|XP_002305053.1| predicted protein [Populus trichocarpa] gi|2...   381   e-104
ref|XP_002300448.1| predicted protein [Populus trichocarpa] gi|2...   330   2e-88

>ref|XP_002522268.1| conserved hypothetical protein [Ricinus communis]
           gi|223538521|gb|EEF40126.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 506

 Score =  414 bits (1063), Expect = e-113
 Identities = 188/242 (77%), Positives = 208/242 (85%), Gaps = 3/242 (1%)
 Frame = +1

Query: 1   SWNQCNEVGDETPGMGSPRAADCFDVYKSSTQGG-KDCSICKKFPHMVVHRVTEHDNKLG 177
           SWNQCNEVGDE P MGSPRAADCFDVYK S Q   K+CS C   P+M+VHRVTE DNKLG
Sbjct: 51  SWNQCNEVGDEVPNMGSPRAADCFDVYKGSQQSEEKNCSFCSLLPYMLVHRVTERDNKLG 110

Query: 178 VGDPFLG--GENITDVDLYAAEKELYLGSKCEVDDTPNPWQFWMIMLKSGNMDTYAAKCP 351
           VGDPFLG   +++ DVDLYAAEKELYLGSKC+V+DTP+PWQFWMIMLKSGNMDTYAAKCP
Sbjct: 111 VGDPFLGLQPKSLNDVDLYAAEKELYLGSKCQVEDTPSPWQFWMIMLKSGNMDTYAAKCP 170

Query: 352 KDGHKVGPYGPDSRFPCFGKGCMNQPLIYHDYTTLQGPNRTTLRGSFYGSWDLDANVSMG 531
           K+G KVGP+G D  FPCFG+GCMNQP IYHDYTTL+GPNRTTL+G FYGSWDLDA++  G
Sbjct: 171 KNGQKVGPFGSDPNFPCFGQGCMNQPFIYHDYTTLKGPNRTTLKGRFYGSWDLDADLRKG 230

Query: 532 MEAKKSYYSVTWEKEFGEGSWVFHHVLKTSKKYPWLMLYLRSDATKGFSGGYHYQTRGMS 711
           +    SY+SVTWEKE G+GSW FHHVL+TS KYPWLMLYLRSDAT G SGGYHY TRGMS
Sbjct: 231 LLGNNSYHSVTWEKELGKGSWAFHHVLRTSTKYPWLMLYLRSDATFGLSGGYHYPTRGMS 290

Query: 712 KI 717
           KI
Sbjct: 291 KI 292


>emb|CBI30727.3| unnamed protein product [Vitis vinifera]
          Length = 467

 Score =  402 bits (1032), Expect = e-110
 Identities = 184/243 (75%), Positives = 208/243 (85%), Gaps = 4/243 (1%)
 Frame = +1

Query: 1   SWNQCNEVGDETPGMGSPRAADCFDVYKSST--QGGKDCSICKKFPHMVVHRVTEHDNKL 174
           SWNQCNEVGDETP MGSPRAADCFDVYKS+      K CS+C   P+++VHRVTE DNKL
Sbjct: 12  SWNQCNEVGDETPNMGSPRAADCFDVYKSAQLLNTQKKCSVCNAIPYLLVHRVTEEDNKL 71

Query: 175 GVGDPFLGGENI--TDVDLYAAEKELYLGSKCEVDDTPNPWQFWMIMLKSGNMDTYAAKC 348
           GVG PFLG +    T+ DLYAA+KE+YLGSKC+V+DTP PWQFWMIMLKSGNMDTYAAKC
Sbjct: 72  GVGQPFLGVQPQAGTNADLYAAKKEIYLGSKCQVEDTPKPWQFWMIMLKSGNMDTYAAKC 131

Query: 349 PKDGHKVGPYGPDSRFPCFGKGCMNQPLIYHDYTTLQGPNRTTLRGSFYGSWDLDANVSM 528
           PK+GHKVGPYGPD +FPCFG+GCMN PLIYH+YTTL+G   +T++G FYGSWDLDA++S 
Sbjct: 132 PKNGHKVGPYGPDDQFPCFGEGCMNHPLIYHNYTTLRG---STMKGRFYGSWDLDADLSK 188

Query: 529 GMEAKKSYYSVTWEKEFGEGSWVFHHVLKTSKKYPWLMLYLRSDATKGFSGGYHYQTRGM 708
           GM    SY+SVTWEK+ GEGSWVFHHVL+TS KYPWLMLYLRSDAT GFSGGYHY TRGM
Sbjct: 189 GMVGNISYHSVTWEKQLGEGSWVFHHVLRTSTKYPWLMLYLRSDATTGFSGGYHYPTRGM 248

Query: 709 SKI 717
           SKI
Sbjct: 249 SKI 251


>ref|XP_002265152.2| PREDICTED: uncharacterized protein LOC100265127 [Vitis vinifera]
          Length = 514

 Score =  400 bits (1027), Expect = e-109
 Identities = 184/249 (73%), Positives = 208/249 (83%), Gaps = 10/249 (4%)
 Frame = +1

Query: 1   SWNQCNEVGDETPGMGSPRAADCFDVYKSST--------QGGKDCSICKKFPHMVVHRVT 156
           SWNQCNEVGDETP MGSPRAADCFDVYKS+            K CS+C   P+++VHRVT
Sbjct: 53  SWNQCNEVGDETPNMGSPRAADCFDVYKSAQLLNSEPHHPSQKKCSVCNAIPYLLVHRVT 112

Query: 157 EHDNKLGVGDPFLGGENI--TDVDLYAAEKELYLGSKCEVDDTPNPWQFWMIMLKSGNMD 330
           E DNKLGVG PFLG +    T+ DLYAA+KE+YLGSKC+V+DTP PWQFWMIMLKSGNMD
Sbjct: 113 EEDNKLGVGQPFLGVQPQAGTNADLYAAKKEIYLGSKCQVEDTPKPWQFWMIMLKSGNMD 172

Query: 331 TYAAKCPKDGHKVGPYGPDSRFPCFGKGCMNQPLIYHDYTTLQGPNRTTLRGSFYGSWDL 510
           TYAAKCPK+GHKVGPYGPD +FPCFG+GCMN PLIYH+YTTL+G   +T++G FYGSWDL
Sbjct: 173 TYAAKCPKNGHKVGPYGPDDQFPCFGEGCMNHPLIYHNYTTLRG---STMKGRFYGSWDL 229

Query: 511 DANVSMGMEAKKSYYSVTWEKEFGEGSWVFHHVLKTSKKYPWLMLYLRSDATKGFSGGYH 690
           DA++S GM    SY+SVTWEK+ GEGSWVFHHVL+TS KYPWLMLYLRSDAT GFSGGYH
Sbjct: 230 DADLSKGMVGNISYHSVTWEKQLGEGSWVFHHVLRTSTKYPWLMLYLRSDATTGFSGGYH 289

Query: 691 YQTRGMSKI 717
           Y TRGMSKI
Sbjct: 290 YPTRGMSKI 298


>ref|XP_002305053.1| predicted protein [Populus trichocarpa] gi|222848017|gb|EEE85564.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score =  381 bits (978), Expect = e-104
 Identities = 174/241 (72%), Positives = 199/241 (82%), Gaps = 2/241 (0%)
 Frame = +1

Query: 1   SWNQCNEVGDETPGMGSPRAADCFDVYKSSTQGGKDCSICKKFPHMVVHRVTEHDNKLGV 180
           SWNQCNEVG+E P MGSPRAADCFD+YK+S +                  VTE DNKL V
Sbjct: 12  SWNQCNEVGEEVPSMGSPRAADCFDIYKASPKA----------------EVTEEDNKLSV 55

Query: 181 GDPFLGGEN--ITDVDLYAAEKELYLGSKCEVDDTPNPWQFWMIMLKSGNMDTYAAKCPK 354
           G+PFLG +   + DV+LYAA+KELYLGSKC+V+DTPNPWQFWMIMLKSGNMDTY+AKCPK
Sbjct: 56  GNPFLGVQPNALYDVNLYAADKELYLGSKCQVEDTPNPWQFWMIMLKSGNMDTYSAKCPK 115

Query: 355 DGHKVGPYGPDSRFPCFGKGCMNQPLIYHDYTTLQGPNRTTLRGSFYGSWDLDANVSMGM 534
           +GH+VGP+GPD+ FPCFGKGCMNQP IYHDYTTLQGPNRTTL+G FYGSWDLDA++S G+
Sbjct: 116 NGHRVGPFGPDTGFPCFGKGCMNQPFIYHDYTTLQGPNRTTLKGRFYGSWDLDADLSKGL 175

Query: 535 EAKKSYYSVTWEKEFGEGSWVFHHVLKTSKKYPWLMLYLRSDATKGFSGGYHYQTRGMSK 714
               SY+SVTWEKE G+GSW+FHH+L+TS KYPWLMLYLRSDAT   SGGYHY TRGMSK
Sbjct: 176 MDNISYHSVTWEKEVGKGSWIFHHLLRTSTKYPWLMLYLRSDATNDVSGGYHYPTRGMSK 235

Query: 715 I 717
           I
Sbjct: 236 I 236


>ref|XP_002300448.1| predicted protein [Populus trichocarpa] gi|222847706|gb|EEE85253.1|
           predicted protein [Populus trichocarpa]
          Length = 417

 Score =  330 bits (845), Expect = 2e-88
 Identities = 149/241 (61%), Positives = 182/241 (75%), Gaps = 2/241 (0%)
 Frame = +1

Query: 1   SWNQCNEVGDETPGMGSPRAADCFDVYKSSTQGGKDCSICKKFPHMVVHRVTEHDNKLGV 180
           +WNQCNEVG+E  GMGSPR ADCFDV  S++QG             ++H V E DNKLG+
Sbjct: 19  AWNQCNEVGEEVFGMGSPRMADCFDVDNSTSQGA------------LIHMVDERDNKLGI 66

Query: 181 GDPFLGGENITDVDLYAAEKELYLGSKCEVDDTPNPWQFWMIMLKSGNMDTYAAKCPKDG 360
            D   GG N ++VD+YAA KE+YLG KC+V D P PWQFWMIM+KSGNMDT AA CP++G
Sbjct: 67  SDGSYGGINASNVDVYAASKEIYLGDKCQVQDNPRPWQFWMIMVKSGNMDTLAATCPQNG 126

Query: 361 HKVGPYGPDSRFPCFGKGCMNQPLIYHDYTTLQGPNRTTLRGSFYGSWDLDAN--VSMGM 534
            K  P+ P+ RFPCFG GCMN PL+YH+YT+LQG N + L+GSFYG+WDL+ +      +
Sbjct: 127 KKSTPFPPEPRFPCFGLGCMNMPLMYHNYTSLQGDNDSNLKGSFYGTWDLNVDHVSKAAV 186

Query: 535 EAKKSYYSVTWEKEFGEGSWVFHHVLKTSKKYPWLMLYLRSDATKGFSGGYHYQTRGMSK 714
               SY+++TWEKE G+GSWVFHH LKTS  YPWLMLYLRSDAT+G+SGGYHY+TRGMSK
Sbjct: 187 SNGTSYFNITWEKEIGKGSWVFHHFLKTSSNYPWLMLYLRSDATEGYSGGYHYETRGMSK 246

Query: 715 I 717
           I
Sbjct: 247 I 247


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