BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023433
         (939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat...    65   2e-08
emb|CBI29360.3| unnamed protein product [Vitis vinifera]               65   2e-08
emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera]    64   4e-08
ref|XP_002527095.1| polyadenylate-binding protein, putative [Ric...    61   4e-07
ref|XP_004140947.1| PREDICTED: polyadenylate-binding protein 3-l...    60   6e-07

>ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
            [Vitis vinifera]
          Length = 1093

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 49/139 (35%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
 Frame = -1

Query: 906  QAHPAQVQASGVAQVHVSSGLHLLSPLASTPGPQQPYFGQGYADLVRPQPAGCGYE*FDF 727
            QA  AQ+++ G A   + SG+      A    PQQ YFGQG   L+  QPAG G++    
Sbjct: 842  QAQFAQIRSPG-AMTPLQSGVPGFHSGAPRLAPQQLYFGQGTPGLIPTQPAGYGFQQQLM 900

Query: 726  -GNRPAMALQYTVPDHLRGQGQPELPISVRLSGTPQQQLHQARPAQVQASG-----MAHA 565
             G RP +A  + +P  L+ QGQP   + VR  G  QQ  HQ +P   + S      MA+ 
Sbjct: 901  PGMRPGVAPNFIMPYQLQRQGQPGQRMGVRRGGNSQQMQHQQQPLLHRNSNQSYRYMANG 960

Query: 564  SSGLHLSYPLAPTLGPQPP 508
             +G+  S      +GP  P
Sbjct: 961  RNGVDPSMVPQGLMGPVMP 979


>emb|CBI29360.3| unnamed protein product [Vitis vinifera]
          Length = 633

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 49/139 (35%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
 Frame = -1

Query: 906 QAHPAQVQASGVAQVHVSSGLHLLSPLASTPGPQQPYFGQGYADLVRPQPAGCGYE*FDF 727
           QA  AQ+++ G A   + SG+      A    PQQ YFGQG   L+  QPAG G++    
Sbjct: 382 QAQFAQIRSPG-AMTPLQSGVPGFHSGAPRLAPQQLYFGQGTPGLIPTQPAGYGFQQQLM 440

Query: 726 -GNRPAMALQYTVPDHLRGQGQPELPISVRLSGTPQQQLHQARPAQVQASG-----MAHA 565
            G RP +A  + +P  L+ QGQP   + VR  G  QQ  HQ +P   + S      MA+ 
Sbjct: 441 PGMRPGVAPNFIMPYQLQRQGQPGQRMGVRRGGNSQQMQHQQQPLLHRNSNQSYRYMANG 500

Query: 564 SSGLHLSYPLAPTLGPQPP 508
            +G+  S      +GP  P
Sbjct: 501 RNGVDPSMVPQGLMGPVMP 519


>emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera]
          Length = 632

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 42/105 (40%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
 Frame = -1

Query: 906 QAHPAQVQASGVAQVHVSSGLHLLSPLASTPGPQQPYFGQGYADLVRPQPAGCGYE*FDF 727
           QA  AQ+++ G A   + SG+      A    PQQ YFGQG   L+  QPAG G++    
Sbjct: 408 QAQFAQIRSPG-AMTPLQSGVPGFHSGAPRLAPQQLYFGQGTPGLIPTQPAGYGFQQQLM 466

Query: 726 -GNRPAMALQYTVPDHLRGQGQPELPISVRLSGTPQQQLHQARPA 595
            G RP +A  + +P  L+ QGQP   + VR  G  QQ  HQ +PA
Sbjct: 467 PGMRPGVAPNFIMPYQLQRQGQPGQRMGVRRGGNSQQMQHQQQPA 511


>ref|XP_002527095.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223533518|gb|EEF35258.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 657

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
 Frame = -1

Query: 906 QAHPAQVQASGVAQVHVSSGLHLLSPLASTPGPQQPYFGQGYADLVRPQPAGCGYE*FDF 727
           QAH A V+A G A   + SG+   +  A    PQQ YFGQG   ++ PQ AG G++    
Sbjct: 414 QAHFALVRAPG-ALAPLPSGIPGYNAGAPRLAPQQLYFGQGTPGMMPPQHAGYGFQQQIL 472

Query: 726 GN-RPAMALQYTVPDHLRGQGQPELPISVRLSGTPQQQLHQ 607
            + RPA+   + +P HL+ QGQP   + +R  G PQQ   Q
Sbjct: 473 TSMRPAVGPNFIIPYHLQRQGQPGQRMGMRRGGNPQQMQQQ 513


>ref|XP_004140947.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
          Length = 652

 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 41/103 (39%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
 Frame = -1

Query: 906 QAHPAQVQASGVAQVHVSSGLHLLSPLASTPGPQQPYFGQGYADLVRPQPAGCGYE-*FD 730
           QA  AQ++A+G     + SG+    P A+   PQQ Y+GQG   L  PQPAG G++    
Sbjct: 403 QAQFAQIRAAGGIS-SLPSGIPGFHPGAARVSPQQMYYGQGNPGLAPPQPAGYGFQPQLM 461

Query: 729 FGNRPAMALQYTVPDHLRGQGQPELPISVRLSGT----PQQQL 613
            G RP M   + +P   + QGQP   + VR  G     PQQQL
Sbjct: 462 SGMRPGMGPNFLMPYQFQRQGQPGPRLGVRRGGNSQPLPQQQL 504