BLASTX nr result

ID: Coptis25_contig00023432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023432
         (1283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249...   267   5e-69
ref|XP_002526688.1| conserved hypothetical protein [Ricinus comm...   246   1e-62
ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|2...   235   2e-59
ref|XP_003623391.1| Integrator complex subunit [Medicago truncat...   200   6e-49
ref|XP_004147305.1| PREDICTED: uncharacterized protein LOC101203...   199   1e-48

>ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249976 [Vitis vinifera]
          Length = 1007

 Score =  267 bits (682), Expect = 5e-69
 Identities = 151/333 (45%), Positives = 197/333 (59%), Gaps = 2/333 (0%)
 Frame = -1

Query: 1247 EATSAIVFVLRTVAATWPLIKSGSIDEIQRTLRSCKDELVTISVEFNGSVGFLAFACQYL 1068
            E   +I  +L  +   W L++ G + E+ R LRS ++EL T   +   S   LAF  QYL
Sbjct: 619  EVAKSIKLILLKINDIWFLVQKGCMAEVLRMLRSFREELATYMSDSLVSADTLAFTFQYL 678

Query: 1067 RVIKMLVKVCNHFLPPEKVNGGRTGXXXXXXXXXXXXXXXLRHQFLGFNXXXXXXXXXXX 888
            RV+K+L KV  HFLPP K    R G               +R++F G +           
Sbjct: 679  RVVKLLAKVWEHFLPPRKTQSYRIGELNLLLGKLDRNLKEMRYRFRGLSKEEELHVLELI 738

Query: 887  XLNCVLRLSKPEICCRRTTLKKLCATMSNLELLCEKGFIKLSDFARELKSFCQE-ESSGD 711
             + C+LRLSK EICC   TLKKL   +S+ E L ++G I+  +F  ELK    E ++  D
Sbjct: 739  LVTCILRLSKVEICCHNATLKKLSMIISHAEFLHKEGSIEPYNFVVELKKSLGEIDTYND 798

Query: 710  DVSYGSFHVERLLELFSLKQFVYSEKIKHIKADLDVPGNDSENPLPFISGLPTAITFQIT 531
              S   F ++RLLE FSLKQF  S   KHIKA++D+PGND+E PLPFISGLP  I  +IT
Sbjct: 799  GASCRPFLLKRLLESFSLKQFRLSGSPKHIKAEIDLPGNDTE-PLPFISGLPVGIPLEIT 857

Query: 530  LHNVSSEDRLWLRMAV-EEIIQYVFLDLNQFEDYDCFKKVAFSVPCYITPKAASFSLRAC 354
            L+NVSSE+RLWLRM V E+++++VFLDLNQ    D  +K  F  P Y TPKA S +LR C
Sbjct: 858  LYNVSSENRLWLRMIVHEQLMEFVFLDLNQSGGCDEVRKFTFMAPFYRTPKAMSLTLRVC 917

Query: 353  IGKECLYEDVKSAKRMGGPNHDLTFLCNETEVY 255
            IG ECL+EDV      GGP  +L ++C E EVY
Sbjct: 918  IGMECLFEDVNLITDCGGPTRELVYICQEKEVY 950


>ref|XP_002526688.1| conserved hypothetical protein [Ricinus communis]
            gi|223533988|gb|EEF35710.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 890

 Score =  246 bits (627), Expect = 1e-62
 Identities = 141/329 (42%), Positives = 186/329 (56%), Gaps = 6/329 (1%)
 Frame = -1

Query: 1223 VLRTVAATWPLIKSGSIDEIQRTLRSCKDELVTISVEFNGSVGFLAFACQYLRVIKMLVK 1044
            +   V   W L+ S  I    +TLR+CK+EL  +S+      G +AF  QYL+V K+L K
Sbjct: 564  IFAKVKDVWVLVHSSCISAALKTLRACKEELTMLSLALAEPTGVVAFMSQYLKVTKLLAK 623

Query: 1043 VCNHFLPPEKVNGGRTGXXXXXXXXXXXXXXXLRHQFLGFNXXXXXXXXXXXXLNCVLRL 864
            +  + +   KV     G               +R +F+GF+            + C+LRL
Sbjct: 624  IWGNIV--WKVQSYEIGELEILLSKLERRLREMRSRFIGFSKEEESYVLELILVACILRL 681

Query: 863  SKPEICCRRTTLKKLCATMSNLELLCEKGFIKLSDFARELKSFCQEESSGDDVSYGS--- 693
            SK EICC  TTLK+L AT+S +E L E+G I+LS+F  E+K    E      +S G    
Sbjct: 682  SKAEICCYHTTLKRLSATISLIEFLHEEGSIELSNFVVEVKKTLHESG----ISIGGTLC 737

Query: 692  --FHVERLLELFSLKQFVYSEKIKHIKADLDVPGNDSENPLPFISGLPTAITFQITLHNV 519
              F   +L++ FS+KQF     ++H+ A ++VP  DSENPLPF+ GLP AI   ITLHNV
Sbjct: 738  SPFGFMKLIDHFSIKQFSSCTGVRHLYAAMNVPNIDSENPLPFVPGLPVAIPLTITLHNV 797

Query: 518  SSEDRLWLRMAV-EEIIQYVFLDLNQFEDYDCFKKVAFSVPCYITPKAASFSLRACIGKE 342
             SE RLWLR+A+ EE IQ++FLDLN     D  KK  F  P Y TPK  SF+LR CIG E
Sbjct: 798  LSETRLWLRLAMSEESIQFLFLDLNILGGSDEVKKCTFVAPFYRTPKTGSFTLRVCIGME 857

Query: 341  CLYEDVKSAKRMGGPNHDLTFLCNETEVY 255
            C++EDV S K  GGP   L +LC E EVY
Sbjct: 858  CMFEDVHSVKNFGGPKRRLVYLCPEKEVY 886


>ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|222867661|gb|EEF04792.1|
            predicted protein [Populus trichocarpa]
          Length = 949

 Score =  235 bits (599), Expect = 2e-59
 Identities = 138/337 (40%), Positives = 188/337 (55%), Gaps = 3/337 (0%)
 Frame = -1

Query: 1247 EATSAIVFVLRTVAATWPLIKSGSIDEIQRTLR-SCKDELVTISVEFNGSVGFLAFACQY 1071
            E   ++  +L  V   W L++S   +   R LR  CK EL  ++     S G LAF  QY
Sbjct: 611  EVMKSVNLILARVRDAWLLVQSRCTNVAVRALRLDCKRELAVLTSASLESAGILAFTMQY 670

Query: 1070 LRVIKMLVKVCNHFLPPEKVNGGRTGXXXXXXXXXXXXXXXLRHQFLGFNXXXXXXXXXX 891
            L+V+K+  K+  H +   K+    TG               LR++++GF+          
Sbjct: 671  LQVMKLFAKIWEHVV--WKIRSDETGGLEYLFGKLDVRLRELRYRYIGFSKEEELYVLEL 728

Query: 890  XXLNCVLRLSKPEICCRRTTLKKLCATMSNLELLCEKGFIKLSDFARELKSFCQE-ESSG 714
              + C+LRLSK EICC  TTLKKL A +S++E+L +KG ++ S+   + K    E ESS 
Sbjct: 729  IVVACMLRLSKVEICCSPTTLKKLSAIISHIEILNDKGPMEPSNILMDAKKTVHEIESSK 788

Query: 713  DDVSYGSFHVERLLELFSLKQFVYSEKIKHIKADLDVPGNDSENPLPFISGLPTAITFQI 534
              +S   F +  L++ F+LKQF    +++HI A+LDVPGNDSENPLPF+SGLP AI   I
Sbjct: 789  AGISCSLFLITNLVDFFTLKQFSLCPRVRHINAELDVPGNDSENPLPFVSGLPVAIPLDI 848

Query: 533  TLHNVSSEDRLWLRMAV-EEIIQYVFLDLNQFEDYDCFKKVAFSVPCYITPKAASFSLRA 357
            TL+NVSSE+RLWL + + +E  Q+VFLD N     +  KK  F  P Y TPKA SFS   
Sbjct: 849  TLYNVSSENRLWLTIRMSQESTQFVFLDSNILGGCNEVKKFTFMAPFYRTPKARSFSSWI 908

Query: 356  CIGKECLYEDVKSAKRMGGPNHDLTFLCNETEVYFVI 246
             IG EC  ED    K  GGP   L +LC E EV+  +
Sbjct: 909  SIGMECALEDCHLVKHCGGPKRKLVYLCQEKEVHLCL 945


>ref|XP_003623391.1| Integrator complex subunit [Medicago truncatula]
            gi|355498406|gb|AES79609.1| Integrator complex subunit
            [Medicago truncatula]
          Length = 906

 Score =  200 bits (509), Expect = 6e-49
 Identities = 118/339 (34%), Positives = 181/339 (53%), Gaps = 3/339 (0%)
 Frame = -1

Query: 1259 SNQKEATSAIVFVLRTVAATWPLIKSGSIDEIQRTLRSCKDELVTISVEFNGSVGFLAFA 1080
            S   E T+ + ++L      W + ++G  +E+   LR  KDEL T+  +  GS   LAF 
Sbjct: 565  SEDSEVTTVVNYILAKFPDMWQMTETGLTNEV---LRCLKDELATLKFDSLGSDDALAFT 621

Query: 1079 CQYLRVIKMLVKVCNHFLPPEKVNGGRTGXXXXXXXXXXXXXXXLRHQFLGFNXXXXXXX 900
              YLR+IK+LV+V  H    +       G               L  +F+GF+       
Sbjct: 622  LLYLRIIKLLVEVWEHLSLGKGSYSHGMGELEFKLRKLDRRVKELMSKFVGFSAEEELNI 681

Query: 899  XXXXXLNCVLRLSKPEICCRRTTLKKLCATMSNLELLCEKGFIKLSDFARELKSFCQE-- 726
                 +   LRL K E  C     K+L +  S +E + ++     ++F  EL+    E  
Sbjct: 682  LEIILVTYALRLCKVETICVNLAFKRLTSIYSCVESILKERSDSPTNFVVELRKLLHECQ 741

Query: 725  ESSGDDVSYGSFHVERLLELFSLKQFVYSEKIKHIKADLDVPGNDSENPLPFISGLPTAI 546
             +S +  S      +R L+LFSLK+FV+   I+ +KA+L +  NDS +P PF+SGLP +I
Sbjct: 742  TTSINGASCSPLQFDRCLKLFSLKKFVFHGTIRQLKAELRISNNDSLHPFPFVSGLPVSI 801

Query: 545  TFQITLHNVSSEDRLWLRMAVEE-IIQYVFLDLNQFEDYDCFKKVAFSVPCYITPKAASF 369
              +ITLHN+ S+ +LWLRM++++ ++QY+FLDL+        +   F+ P Y TPKA SF
Sbjct: 802  PCEITLHNIISKCKLWLRMSLDDGLVQYIFLDLDHLVGSGDVRNFVFAAPFYRTPKANSF 861

Query: 368  SLRACIGKECLYEDVKSAKRMGGPNHDLTFLCNETEVYF 252
            +L+ CI  ECL+E+V   +R GGP ++L  LC E +VYF
Sbjct: 862  TLKVCISLECLFENVCPVQRYGGPKYELVSLCKEKQVYF 900


>ref|XP_004147305.1| PREDICTED: uncharacterized protein LOC101203415 [Cucumis sativus]
            gi|449501277|ref|XP_004161326.1| PREDICTED:
            uncharacterized protein LOC101225075 [Cucumis sativus]
          Length = 815

 Score =  199 bits (507), Expect = 1e-48
 Identities = 119/333 (35%), Positives = 176/333 (52%), Gaps = 2/333 (0%)
 Frame = -1

Query: 1247 EATSAIVFVLRTVAATWPLIKSGSIDEIQRTLRSCKDELVTISVEFNGSVGFLAFACQYL 1068
            +A  ++  +L  V   WPLI+SG + E  RTLR CK+ L   +   N   G LAF  QYL
Sbjct: 477  DAIESVKTILLKVQDIWPLIQSGVLHEALRTLRFCKEALGVFTYGTNKYNGALAFTLQYL 536

Query: 1067 RVIKMLVKVCNHFLPPEKVNGGRTGXXXXXXXXXXXXXXXLRHQFLGFNXXXXXXXXXXX 888
            +++K++ KV +  +  ++    RTG               LR +F G             
Sbjct: 537  KILKLVAKVWS-LMSSKRSYPRRTGEWGFLLGKLERGLKELRSRFTGLTKEEEQHILELM 595

Query: 887  XLNCVLRLSKPEICCRRTTLKKLCATMSNLELLCEKGFIKLSDFARELKSFCQEESSGDD 708
             + C+LRLS  E+CC  T L+KL    SN++ L ++   + S F  E++       +   
Sbjct: 596  LVTCILRLSNGEVCCHLTALRKLSTIASNIQHLLKEECKEPSTFVCEVQRSLSNLGTITP 655

Query: 707  VSY-GSFHVERLLELFSLKQFVYSEKIKHIKADLDVPGNDSENPLPFISGLPTAITFQIT 531
             S   S  +  +L+ F+L     SE++KHIKA+L +  N+ E PL F+ GLP  I  QI 
Sbjct: 656  KSLCSSLDLREMLKSFTLGHLEISEELKHIKAELVISDNNYEKPLYFVPGLPVGIPCQII 715

Query: 530  LHNVSSEDRLWLRMAVEEII-QYVFLDLNQFEDYDCFKKVAFSVPCYITPKAASFSLRAC 354
            LHNV SE +LW R+ ++ +  Q+VFLD       D  ++  ++VP Y TPKA+SF  R C
Sbjct: 716  LHNVPSERKLWFRITMDNVTSQFVFLDFLSLGGCDEVREFMYTVPFYRTPKASSFIARIC 775

Query: 353  IGKECLYEDVKSAKRMGGPNHDLTFLCNETEVY 255
            IG EC +E+ +  +R GGP  DL ++C E EVY
Sbjct: 776  IGLECWFENAEVNERRGGPKCDLAYICKEKEVY 808


Top