BLASTX nr result

ID: Coptis25_contig00023429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023429
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275164.1| PREDICTED: aspartic proteinase nepenthesin-2...    72   6e-11
gb|ABK94105.1| unknown [Populus trichocarpa]                           70   2e-10
ref|XP_002511962.1| Aspartic proteinase nepenthesin-1 precursor,...    69   4e-10
ref|XP_003534178.1| PREDICTED: aspartic proteinase nepenthesin-1...    67   1e-09
ref|XP_002529147.1| Aspartic proteinase nepenthesin-1 precursor,...    67   2e-09

>ref|XP_002275164.1| PREDICTED: aspartic proteinase nepenthesin-2 [Vitis vinifera]
          Length = 496

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 8/84 (9%)
 Frame = +1

Query: 34  SSYSLNLYPRNAVYKSQFKSLKEMTLDRLERDVARVNFLNNKIYQAINGNGTTDLKPMDI 213
           SS+SL L+PR  ++    K  + + L RL RD ARV  +N K+  A++G   +DL PMD 
Sbjct: 78  SSFSLELHPRELLHGGSHKDYRALMLSRLARDSARVKAINTKLQLAVSGTDKSDLVPMDT 137

Query: 214 EI--------PVTSGRSQRSGEYF 261
           EI        PVTSG SQ SGEYF
Sbjct: 138 EILHPQDFSTPVTSGTSQGSGEYF 161


>gb|ABK94105.1| unknown [Populus trichocarpa]
          Length = 499

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
 Frame = +1

Query: 37  SYSLNLYPRNAVYKSQFKSLKEMTLDRLERDVARVNFLNNKIYQAINGNGTTDLKPMDIE 216
           S+SL L+PR  +YK   K  K + L RL RD  R N L  ++  A+     +DLKP++ E
Sbjct: 81  SFSLELHPRETIYKIHHKDYKSLVLSRLHRDTVRFNSLTARLQLALEDISKSDLKPLETE 140

Query: 217 I-------PVTSGRSQRSGEYF 261
           I       PVTSG SQ SGEYF
Sbjct: 141 IKPEDLSTPVTSGTSQGSGEYF 162


>ref|XP_002511962.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus
           communis] gi|223549142|gb|EEF50631.1| Aspartic
           proteinase nepenthesin-1 precursor, putative [Ricinus
           communis]
          Length = 495

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 7/83 (8%)
 Frame = +1

Query: 34  SSYSLNLYPRNAVYKSQFKSLKEMTLDRLERDVARVNFLNNKIYQAINGNGTTDLKPMDI 213
           SS+SL+L PR+ ++K+  K  K + L RL RD +RV  +  ++   +NG   +DLKP+  
Sbjct: 78  SSFSLSLNPRDTIHKTPHKDYKALVLSRLHRDSSRVQAITTRLQLILNGVSKSDLKPLQT 137

Query: 214 EI-------PVTSGRSQRSGEYF 261
           EI       PV+SG SQ SGEYF
Sbjct: 138 EIQPQDLSTPVSSGTSQGSGEYF 160


>ref|XP_003534178.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Glycine max]
          Length = 492

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
 Frame = +1

Query: 34  SSYSLNLYPRNAVYKSQFKSLKEMTLDRLERDVARVNFLNNKIYQAINGNGTTD------ 195
           SS+SL L+PR  +   Q  + K + L RL RD ARVN LN K+  A++    +D      
Sbjct: 75  SSFSLQLHPRETLLNEQHPNYKTLVLSRLARDTARVNSLNTKLQLALSSLNRSDLYPTET 134

Query: 196 --LKPMDIEIPVTSGRSQRSGEYFA 264
             L+P D+  PV+SG +Q SGEYF+
Sbjct: 135 ELLRPEDLSTPVSSGTAQGSGEYFS 159


>ref|XP_002529147.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus
           communis] gi|223531426|gb|EEF33260.1| Aspartic
           proteinase nepenthesin-1 precursor, putative [Ricinus
           communis]
          Length = 479

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 13/98 (13%)
 Frame = +1

Query: 10  TLLHQQNI----SSYSLNLYPRNAVYKSQFKSLKEMTLDRLERDVARVNFLNNKIYQAIN 177
           T  +QQ I    S  ++ L+ R +V K++    + +TL RLERD ARV  +N ++  AI+
Sbjct: 49  TPFNQQEIVTSSSQLTMELHSRTSVQKTKHPDYRSLTLSRLERDSARVKSINTRLDLAIH 108

Query: 178 GNGTTDLKPM---------DIEIPVTSGRSQRSGEYFA 264
           G  T+DLKP+         D++ P+ SG SQ SGEYF+
Sbjct: 109 GLSTSDLKPLDTDSQFRAEDLQGPIISGTSQGSGEYFS 146


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