BLASTX nr result

ID: Coptis25_contig00023415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023415
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001147909.1| ANAC076 [Zea mays] gi|195614516|gb|ACG29088....    64   4e-08
ref|XP_003520268.1| PREDICTED: NAC domain-containing protein 7-l...    58   2e-06
ref|XP_003517186.1| PREDICTED: NAC domain-containing protein 7-l...    57   4e-06
gb|AFJ91964.1| SWN4 [Brachypodium distachyon]                          57   5e-06
ref|XP_003561236.1| PREDICTED: NAC domain-containing protein 7-l...    57   5e-06

>ref|NP_001147909.1| ANAC076 [Zea mays] gi|195614516|gb|ACG29088.1| ANAC076 [Zea mays]
           gi|346991194|gb|AEO53059.1| secondary wall NAC
           transcription factor 7 [Zea mays]
           gi|413953580|gb|AFW86229.1| putative NAC domain
           transcription factor superfamily protein [Zea mays]
           gi|413953588|gb|AFW86237.1| putative NAC domain
           transcription factor superfamily protein [Zea mays]
          Length = 349

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 45/146 (30%), Positives = 79/146 (54%), Gaps = 23/146 (15%)
 Frame = -3

Query: 372 SAQTREEMKKLLGLGYSFCPSEGVLVDYYLRKKIMDEPIDYCLIEEVDNVYAIHPQDL-- 199
           +AQT+++ ++L+  G+ F P++  LVDYYLRKK+    ID  +I++VD +Y I P DL  
Sbjct: 9   AAQTQQQQQQLVPPGFRFHPTDEELVDYYLRKKVASRRIDLNVIKDVD-LYKIEPWDLQD 67

Query: 198 -------AGISQVQYFFTSHPFELQSTDVK-------GRWIASVKEDIVFKDVK---VGF 70
                      Q +++F SH  +   T  +       G W A+ ++  ++ + +   VG 
Sbjct: 68  KCRLGGPGEEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKPIYANKQRQLVGM 127

Query: 69  KQTVNYCQG----NHKSGYNITEYQL 4
           ++T+ Y +G     HKS + + EY+L
Sbjct: 128 RKTLVYYKGRAPNGHKSDWIMHEYRL 153


>ref|XP_003520268.1| PREDICTED: NAC domain-containing protein 7-like [Glycine max]
          Length = 362

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 18/134 (13%)
 Frame = -3

Query: 351 MKKLLGLGYSFCPSEGVLVDYYLRKKIMDEPIDYCLIEEVDNVYAIHPQDLAGISQVQY- 175
           M+  +  G+ F P++  LV YYLRKK+  + ID  +I+E+D +Y I P DL  I ++ Y 
Sbjct: 2   MESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIKEID-LYRIEPWDLQEICRIGYE 60

Query: 174 -----FFTSHPFELQSTDVK-------GRWIASVKEDIVFKDVK-VGFKQTVNYCQG--- 43
                +F SH  +   T  +       G W A+ ++  V++ +K +G ++T+ + +G   
Sbjct: 61  EQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKSVYESIKLIGMRKTLVFYKGRAP 120

Query: 42  -NHKSGYNITEYQL 4
              K+ + + EY+L
Sbjct: 121 NGQKTDWIMHEYRL 134


>ref|XP_003517186.1| PREDICTED: NAC domain-containing protein 7-like [Glycine max]
          Length = 344

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 18/136 (13%)
 Frame = -3

Query: 357 EEMKKLLGLGYSFCPSEGVLVDYYLRKKIMDEPIDYCLIEEVDNVYAIHPQDLAGISQVQ 178
           E M+  +  G+ F P++  LV YYLRKK+  + ID  +I E+D +Y I P DL    ++ 
Sbjct: 2   ESMESCIPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREID-LYRIEPWDLQERCRIG 60

Query: 177 Y------FFTSHPFELQSTDVK-------GRWIASVKEDIVFKDVK-VGFKQTVNYCQG- 43
           Y      +F SH  +   T  +       G W A+ ++  V++  K +G ++T+ + +G 
Sbjct: 61  YDEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYERAKLIGMRKTLVFYKGR 120

Query: 42  ---NHKSGYNITEYQL 4
                KS + + EY+L
Sbjct: 121 APNGQKSDWIMHEYRL 136


>gb|AFJ91964.1| SWN4 [Brachypodium distachyon]
          Length = 336

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 19/128 (14%)
 Frame = -3

Query: 330 GYSFCPSEGVLVDYYLRKKIMDEPIDYCLIEEVDNVYAIHPQDL-------AGISQVQYF 172
           G+ F P++  LVDYYLRKK+    ID  +I++VD +Y I P DL           Q  ++
Sbjct: 13  GFRFHPTDEELVDYYLRKKVASRRIDLNVIKDVD-LYKIEPWDLQEKCRIGPEEEQSDWY 71

Query: 171 FTSHPFELQSTDVK-------GRWIASVKEDIVF-KDVKVGFKQTVNYCQG----NHKSG 28
           F SH  +   T  +       G W A+ ++  ++ K   VG ++T+ Y +G     HKS 
Sbjct: 72  FFSHKDKKYPTGTRTNRATAAGFWKATGRDKPIYAKHCLVGMRKTLVYYKGRAPNGHKSD 131

Query: 27  YNITEYQL 4
           + + EY+L
Sbjct: 132 WIMHEYRL 139


>ref|XP_003561236.1| PREDICTED: NAC domain-containing protein 7-like [Brachypodium
           distachyon]
          Length = 367

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 19/128 (14%)
 Frame = -3

Query: 330 GYSFCPSEGVLVDYYLRKKIMDEPIDYCLIEEVDNVYAIHPQDL-------AGISQVQYF 172
           G+ F P++  LVDYYLRKK+    ID  +I++VD +Y I P DL           Q  ++
Sbjct: 44  GFRFHPTDEELVDYYLRKKVASRRIDLNVIKDVD-LYKIEPWDLQEKCRIGPEEEQSDWY 102

Query: 171 FTSHPFELQSTDVK-------GRWIASVKEDIVF-KDVKVGFKQTVNYCQG----NHKSG 28
           F SH  +   T  +       G W A+ ++  ++ K   VG ++T+ Y +G     HKS 
Sbjct: 103 FFSHKDKKYPTGTRTNRATAAGFWKATGRDKPIYAKHCLVGMRKTLVYYKGRAPNGHKSD 162

Query: 27  YNITEYQL 4
           + + EY+L
Sbjct: 163 WIMHEYRL 170


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