BLASTX nr result
ID: Coptis25_contig00023412
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00023412
(1515 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|2... 576 e-162
ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-l... 575 e-161
ref|XP_002511032.1| ATP-dependent DNA helicase pcrA, putative [R... 572 e-161
ref|NP_194242.6| P-loop containing nucleoside triphosphate hydro... 547 e-153
gb|ACY64665.1| SRS2 [Arabidopsis thaliana] 541 e-151
>ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|222832580|gb|EEE71057.1|
predicted protein [Populus trichocarpa]
Length = 1056
Score = 576 bits (1485), Expect = e-162
Identities = 290/430 (67%), Positives = 355/430 (82%), Gaps = 2/430 (0%)
Frame = -2
Query: 1514 RNQLSHGRKVLSTLDIISKLVHREQSISAVITSVANMLPQKYLLEQRAVVDVDGGKLLNE 1335
R+QL+ GRKVLSTL +ISKLVHREQSISAVITSVANM+PQKYLLEQRAVVD DGGK LNE
Sbjct: 629 RSQLTQGRKVLSTLQMISKLVHREQSISAVITSVANMVPQKYLLEQRAVVDSDGGKWLNE 688
Query: 1334 DNDLRSVLQYLLDDVSNFLANHYSYAEADKNSVVEEEKGCTNVLTSFIDYISMRESENFR 1155
DNDLRSVLQYLLDDVS+ L+ + E + + V+E+KGC ++L FIDYI+ RE ENFR
Sbjct: 689 DNDLRSVLQYLLDDVSDVLSMQVASKEGESD--VQEQKGCVSLLKEFIDYITEREKENFR 746
Query: 1154 SRRQDNRDSVTLTTIHQSKGLEWDTVFIVKANETEIPLLHENNGIVKENAASLEEERRLL 975
SRR +N +SVTLTTIHQSKGLEWDTVFIVKANE+EIPLLHE NG KEN S+EEERRL
Sbjct: 747 SRRHNNENSVTLTTIHQSKGLEWDTVFIVKANESEIPLLHEFNGSAKENGNSIEEERRLF 806
Query: 974 YVAMTRARKKLYILYVIVDSSWQLLQPSRFLKEIPIHLREVQTELTSVELQGMHEDLSKV 795
YVAMTRARKKL+I YV +DS+WQ+L PSRFLKEIP HLRE+Q E+ +LQ H ++
Sbjct: 807 YVAMTRARKKLFITYVAMDSNWQMLHPSRFLKEIPDHLREIQAEVCLQDLQTKHREIGNE 866
Query: 794 NVKVFDVDPRPEELADVQADAPN--LQCIGIVSSESVDLVEACGGDAFLKRFSVEDRAMI 621
+ P+ ++++D++ ++ + + I S ES++ +++ G+ FL+RF+VE+R++I
Sbjct: 867 TIDFVIDLPKEQKVSDLETESNDFLVNQINEASKESLETIDSYNGNIFLRRFAVEERSVI 926
Query: 620 SHLFHQWAKKKAFEEPKRLLDKIGFVIDERLRIKTNKNKDVLRALKSCLSCAEAFQYAQT 441
SHLFHQWAKK+AF+ PKRLL+K+GFVIDERLR++ NK+KDVLRALKSCLSC EAFQYA+
Sbjct: 927 SHLFHQWAKKQAFQNPKRLLNKVGFVIDERLRVEKNKHKDVLRALKSCLSCDEAFQYAEY 986
Query: 440 VLRWEKLPAEKRAHLTREKQEHFQRLRIENAMGSSVATSKQTSYLQSLGCTVVPTSRLHA 261
VLRWE++PA++RAHL EKQEHFQ+LRIEN+M SS TSKQ YLQ+LGCTV PTSRLHA
Sbjct: 987 VLRWEQIPADQRAHLIHEKQEHFQKLRIENSMSSSAPTSKQIGYLQNLGCTVTPTSRLHA 1046
Query: 260 SRLIEQYKSL 231
SRLIEQYKSL
Sbjct: 1047 SRLIEQYKSL 1056
>ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-like [Vitis vinifera]
Length = 1113
Score = 575 bits (1481), Expect = e-161
Identities = 295/433 (68%), Positives = 356/433 (82%), Gaps = 5/433 (1%)
Frame = -2
Query: 1514 RNQLSHGRKVLSTLDIISKLVHREQSISAVITSVANMLPQKYLLEQRAVVDVDGGKLLNE 1335
R+QL+ GRKVL TLD+ISKLVHREQSISAVITSVANM+PQKYLLEQRAVVDVDGGKLLNE
Sbjct: 685 RSQLTQGRKVLFTLDMISKLVHREQSISAVITSVANMIPQKYLLEQRAVVDVDGGKLLNE 744
Query: 1334 DNDLRSVLQYLLDDVSNFLANHYSYAEADKNSVVEEEKGCTNVLTSFIDYISMRESENFR 1155
DND+RSVLQYLLDDVS+FL+ ++ A +++ ++ +E GC +VL +FID+IS RE ENFR
Sbjct: 745 DNDIRSVLQYLLDDVSDFLSTKFT-ASKEESDIIVKEGGCGHVLKAFIDFISERERENFR 803
Query: 1154 SRRQDNRDSVTLTTIHQSKGLEWDTVFIVKANETEIPLLHENNGIVKENAASLEEERRLL 975
SRR DN +SVTLTTIHQSKGLEWDTVFIVKANE+EIPLLHE NG+VKEN S+EEERRLL
Sbjct: 804 SRRHDNEESVTLTTIHQSKGLEWDTVFIVKANESEIPLLHEFNGVVKENGTSIEEERRLL 863
Query: 974 YVAMTRARKKLYILYVIVDSSWQLLQPSRFLKEIPIHLREVQTELTSVELQGMH--EDLS 801
YV MTRARKKL+ILYV++DSSWQ+LQPSRFLKEIP HL EVQ EL+ +QG+H ++ +
Sbjct: 864 YVGMTRARKKLFILYVLMDSSWQMLQPSRFLKEIPHHLLEVQGELS---VQGLHAKQEST 920
Query: 800 KVNVKVFDVDPRPEELADVQADAPNLQC---IGIVSSESVDLVEACGGDAFLKRFSVEDR 630
+ F + ++ + + PN I S E+ + + +C G++FL+RF+VEDR
Sbjct: 921 PIENAQFTIGEGGDKKSSREYILPNEGLNIQIDECSKETTEPMGSCDGNSFLRRFNVEDR 980
Query: 629 AMISHLFHQWAKKKAFEEPKRLLDKIGFVIDERLRIKTNKNKDVLRALKSCLSCAEAFQY 450
+++SHLFH WAKK+AF+EPKRLLDK+GF IDERLR+ NK+KD LR LKS L C EAF Y
Sbjct: 981 SVVSHLFHHWAKKQAFQEPKRLLDKVGFAIDERLRVTKNKHKDALRELKSSLKCDEAFHY 1040
Query: 449 AQTVLRWEKLPAEKRAHLTREKQEHFQRLRIENAMGSSVATSKQTSYLQSLGCTVVPTSR 270
A+ +L+WEK+PA+KRAHL R KQEHF +LRIENAMGSS TSKQ SYLQ+LGCTVVPTSR
Sbjct: 1041 AEYILKWEKIPADKRAHLMRMKQEHFLKLRIENAMGSSAPTSKQISYLQNLGCTVVPTSR 1100
Query: 269 LHASRLIEQYKSL 231
LHAS LIEQYKSL
Sbjct: 1101 LHASHLIEQYKSL 1113
>ref|XP_002511032.1| ATP-dependent DNA helicase pcrA, putative [Ricinus communis]
gi|223550147|gb|EEF51634.1| ATP-dependent DNA helicase
pcrA, putative [Ricinus communis]
Length = 1089
Score = 572 bits (1475), Expect = e-161
Identities = 296/430 (68%), Positives = 351/430 (81%), Gaps = 2/430 (0%)
Frame = -2
Query: 1514 RNQLSHGRKVLSTLDIISKLVHREQSISAVITSVANMLPQKYLLEQRAVVDVDGGKLLNE 1335
R+QL+ GRKVL TL++I KLVHREQSISAVITSVANM+PQ+YLLEQRAVVDVDGGKLLNE
Sbjct: 662 RSQLNQGRKVLLTLEMILKLVHREQSISAVITSVANMVPQQYLLEQRAVVDVDGGKLLNE 721
Query: 1334 DNDLRSVLQYLLDDVSNFLANHYSYAEADKNSVVEEEKGCTNVLTSFIDYISMRESENFR 1155
DNDLRSVLQYLLDDVS+FL+ A D +V EEE+GC L FIDYI+ RE ENFR
Sbjct: 722 DNDLRSVLQYLLDDVSDFLS--MQCAIKDVGAVREEERGCITTLKDFIDYITEREKENFR 779
Query: 1154 SRRQDNRDSVTLTTIHQSKGLEWDTVFIVKANETEIPLLHENNGIVKENAASLEEERRLL 975
S R +N +SVTLTTIHQSKGLEWD VFI+KANE+EIPLLHE NGI KEN S+EEERRLL
Sbjct: 780 SWRHENENSVTLTTIHQSKGLEWDIVFIIKANESEIPLLHEFNGITKENGTSIEEERRLL 839
Query: 974 YVAMTRARKKLYILYVIVDSSWQLLQPSRFLKEIPIHLREVQTELTSVELQGMHEDLSKV 795
YVAMTRARKKL+ILY +DS+WQ+LQPSRFLKEIP HLRE+Q E+ +LQ +D+SK
Sbjct: 840 YVAMTRARKKLFILYYTLDSNWQMLQPSRFLKEIPDHLREIQAEVCLRDLQTEPQDISKG 899
Query: 794 NVKVFDVDPRPEELADVQADAPNLQCIGIVSS--ESVDLVEACGGDAFLKRFSVEDRAMI 621
V P ++ ++V D + I + ES D V+ C G++FLKRF+V DR+++
Sbjct: 900 TVNSTTSLPGEKQPSEVHRDPIDFLEIQNNNDLKESKDPVDVCNGNSFLKRFAVVDRSVV 959
Query: 620 SHLFHQWAKKKAFEEPKRLLDKIGFVIDERLRIKTNKNKDVLRALKSCLSCAEAFQYAQT 441
SHLFHQWAKK+AF+ PKRLLDK+GFVIDERLRIK NK+KDVLRALK+CLSC EAFQYA+
Sbjct: 960 SHLFHQWAKKQAFQNPKRLLDKVGFVIDERLRIKKNKHKDVLRALKACLSCDEAFQYAEY 1019
Query: 440 VLRWEKLPAEKRAHLTREKQEHFQRLRIENAMGSSVATSKQTSYLQSLGCTVVPTSRLHA 261
LRWE++PA++RAH+ REKQE+FQ++RIEN+M +S T KQ YLQ+LGCTVVPTSRLHA
Sbjct: 1020 ALRWEQIPADERAHMMREKQEYFQKVRIENSMSTSAPTPKQIGYLQNLGCTVVPTSRLHA 1079
Query: 260 SRLIEQYKSL 231
SRLIEQYKSL
Sbjct: 1080 SRLIEQYKSL 1089
>ref|NP_194242.6| P-loop containing nucleoside triphosphate hydrolase-like protein
[Arabidopsis thaliana] gi|332659614|gb|AEE85014.1| P-loop
containing nucleoside triphosphate hydrolase-like protein
[Arabidopsis thaliana]
Length = 1149
Score = 547 bits (1410), Expect = e-153
Identities = 288/431 (66%), Positives = 347/431 (80%), Gaps = 3/431 (0%)
Frame = -2
Query: 1514 RNQLSHGRKVLSTLDIISKLVHREQSISAVITSVANMLPQKYLLEQRAVVDVDGGKLLNE 1335
R+QL+ GRKVL TLD+++KLV REQS+SAV+T VANM+PQKYLLEQRAVVD DGGKLLNE
Sbjct: 724 RSQLTQGRKVLQTLDMVAKLVDREQSLSAVVTCVANMIPQKYLLEQRAVVDNDGGKLLNE 783
Query: 1334 DNDLRSVLQYLLDDVSNFLANHYSYAEADKNSVVEEEKGCTNVLTSFIDYISMRESENFR 1155
DNDLRSVLQYL+DDV+ F++ H + E + ++E+KGC N L SFI+YIS RE+ENFR
Sbjct: 784 DNDLRSVLQYLMDDVAEFISTHCTTTEEE--DAIKEKKGC-NQLHSFINYISERETENFR 840
Query: 1154 SRRQDNRDSVTLTTIHQSKGLEWDTVFIVKANETEIPLLHENNGIVKENAASLEEERRLL 975
SRR+DN +SVTLTTIHQSKGLEWD VFIVKANE EIPLLHE+NG E+ SLEEERRLL
Sbjct: 841 SRRRDNENSVTLTTIHQSKGLEWDIVFIVKANENEIPLLHESNGNASESGTSLEEERRLL 900
Query: 974 YVAMTRARKKLYILYVIVDSSWQLLQPSRFLKEIPIHLREVQTELTSVELQGMHEDL--- 804
YVAMTRARKKL+ LYV VDS+WQ+LQPSRFLKEIP HL +VQ +++ + + +HE+L
Sbjct: 901 YVAMTRARKKLFFLYVTVDSNWQVLQPSRFLKEIPGHLLQVQGDMSVNDCRKVHENLPNK 960
Query: 803 SKVNVKVFDVDPRPEELADVQADAPNLQCIGIVSSESVDLVEACGGDAFLKRFSVEDRAM 624
++ +V F D + EE D N+ S ES+ A G+ FLKRF VE R++
Sbjct: 961 TEQSVSSFGTDIKHEESKLTDNDVMNIP-EDYASEESI-AAYALNGNNFLKRFDVEVRSV 1018
Query: 623 ISHLFHQWAKKKAFEEPKRLLDKIGFVIDERLRIKTNKNKDVLRALKSCLSCAEAFQYAQ 444
+SHLFH WAKK+AF+EPKRL+DK+ FVI ERL IK NK+KDVLRALKS L+ EAFQYA+
Sbjct: 1019 VSHLFHNWAKKQAFQEPKRLIDKVRFVIGERLAIKKNKHKDVLRALKSSLTSEEAFQYAE 1078
Query: 443 TVLRWEKLPAEKRAHLTREKQEHFQRLRIENAMGSSVATSKQTSYLQSLGCTVVPTSRLH 264
VLRWE+LPA+ RAH+ REKQEHFQ+LRIEN+MG+S ATSKQ ++L SLGCTVVPTSRLH
Sbjct: 1079 HVLRWEQLPADTRAHIVREKQEHFQKLRIENSMGTSEATSKQIAFLHSLGCTVVPTSRLH 1138
Query: 263 ASRLIEQYKSL 231
ASRLIEQYKSL
Sbjct: 1139 ASRLIEQYKSL 1149
>gb|ACY64665.1| SRS2 [Arabidopsis thaliana]
Length = 1147
Score = 541 bits (1394), Expect = e-151
Identities = 287/431 (66%), Positives = 346/431 (80%), Gaps = 3/431 (0%)
Frame = -2
Query: 1514 RNQLSHGRKVLSTLDIISKLVHREQSISAVITSVANMLPQKYLLEQRAVVDVDGGKLLNE 1335
R+QL+ GRKVL TLD+++KLV REQS+SAV+T VANM+PQKYLLEQRAVVD DGGKLLNE
Sbjct: 724 RSQLTQGRKVLQTLDMVAKLVDREQSLSAVVTCVANMIPQKYLLEQRAVVDNDGGKLLNE 783
Query: 1334 DNDLRSVLQYLLDDVSNFLANHYSYAEADKNSVVEEEKGCTNVLTSFIDYISMRESENFR 1155
DNDLRSVLQYL+DDV+ F++ H + E + ++E+KGC N L SFI+YIS RE+ENFR
Sbjct: 784 DNDLRSVLQYLMDDVAEFISTHCTTTEEE--DAIKEKKGC-NQLHSFINYISERETENFR 840
Query: 1154 SRRQDNRDSVTLTTIHQSKGLEWDTVFIVKANETEIPLLHENNGIVKENAASLEEERRLL 975
SRR+DN +SVTLTTIHQSKGLEWD VFIVKANE EIPLLHE+NG E+ SLEEERRLL
Sbjct: 841 SRRRDNENSVTLTTIHQSKGLEWDIVFIVKANENEIPLLHESNGNASESGTSLEEERRLL 900
Query: 974 YVAMTRARKKLYILYVIVDSSWQLLQPSRFLKEIPIHLREVQTELTSVELQGMHEDL--- 804
YVAMTRARKKL+ LYV VDS+WQ+LQPSRFLKEIP HL +Q +++ + + +HE+L
Sbjct: 901 YVAMTRARKKLFFLYVTVDSNWQVLQPSRFLKEIPGHL--LQGDMSVNDCRKVHENLPNK 958
Query: 803 SKVNVKVFDVDPRPEELADVQADAPNLQCIGIVSSESVDLVEACGGDAFLKRFSVEDRAM 624
++ +V F D + EE D N+ S ES+ A G+ FLKRF VE R++
Sbjct: 959 TEQSVSSFGTDIKHEESKLTDNDVMNIP-EDYASEESI-AAYALNGNNFLKRFDVEVRSV 1016
Query: 623 ISHLFHQWAKKKAFEEPKRLLDKIGFVIDERLRIKTNKNKDVLRALKSCLSCAEAFQYAQ 444
+SHLFH WAKK+AF+EPKRL+DK+ FVI ERL IK NK+KDVLRALKS L+ EAFQYA+
Sbjct: 1017 VSHLFHNWAKKQAFQEPKRLIDKVRFVIGERLAIKKNKHKDVLRALKSSLTSEEAFQYAE 1076
Query: 443 TVLRWEKLPAEKRAHLTREKQEHFQRLRIENAMGSSVATSKQTSYLQSLGCTVVPTSRLH 264
VLRWE+LPA+ RAH+ REKQEHFQ+LRIEN+MG+S ATSKQ ++L SLGCTVVPTSRLH
Sbjct: 1077 HVLRWEQLPADTRAHIVREKQEHFQKLRIENSMGTSEATSKQIAFLHSLGCTVVPTSRLH 1136
Query: 263 ASRLIEQYKSL 231
ASRLIEQYKSL
Sbjct: 1137 ASRLIEQYKSL 1147