BLASTX nr result

ID: Coptis25_contig00023409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023409
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI41067.3| unnamed protein product [Vitis vinifera]              112   4e-23
ref|NP_199663.2| uncharacterized protein [Arabidopsis thaliana] ...   106   2e-21
ref|XP_002863902.1| hypothetical protein ARALYDRAFT_494914 [Arab...   106   2e-21
dbj|BAA96972.1| unnamed protein product [Arabidopsis thaliana]        106   2e-21
ref|XP_002320600.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21

>emb|CBI41067.3| unnamed protein product [Vitis vinifera]
          Length = 176

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/77 (68%), Positives = 62/77 (80%)
 Frame = +3

Query: 84  GAKLCNVXXXXXXXXXXKLDPDSFEWPFQYEEARPLLDWISSSLRSANVLSPSELSLHEQ 263
           GA+LC +           LDPDSFEWPFQYE+ARP+LDWI SSLRS+NVLS SE+S +EQ
Sbjct: 3   GARLCALLGELGYEGAEALDPDSFEWPFQYEDARPILDWICSSLRSSNVLSLSEVSQYEQ 62

Query: 264 FLQEGKLLEGDDLDFAY 314
           FL+EGKLLEG+DLDFAY
Sbjct: 63  FLEEGKLLEGEDLDFAY 79


>ref|NP_199663.2| uncharacterized protein [Arabidopsis thaliana]
           gi|110737416|dbj|BAF00652.1| hypothetical protein
           [Arabidopsis thaliana] gi|332008298|gb|AED95681.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 617

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/76 (65%), Positives = 61/76 (80%)
 Frame = +3

Query: 87  AKLCNVXXXXXXXXXXKLDPDSFEWPFQYEEARPLLDWISSSLRSANVLSPSELSLHEQF 266
           A+LC++          KLDPDSFEWPFQY++ARP+LDWI SSLR +NVLS +ELSL+EQF
Sbjct: 4   ARLCSLVAELGYEGAGKLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLAELSLYEQF 63

Query: 267 LQEGKLLEGDDLDFAY 314
            ++GKLLEGDDLD AY
Sbjct: 64  QRDGKLLEGDDLDQAY 79


>ref|XP_002863902.1| hypothetical protein ARALYDRAFT_494914 [Arabidopsis lyrata subsp.
           lyrata] gi|297309737|gb|EFH40161.1| hypothetical protein
           ARALYDRAFT_494914 [Arabidopsis lyrata subsp. lyrata]
          Length = 617

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/76 (65%), Positives = 61/76 (80%)
 Frame = +3

Query: 87  AKLCNVXXXXXXXXXXKLDPDSFEWPFQYEEARPLLDWISSSLRSANVLSPSELSLHEQF 266
           A+LC++          KLDPDSFEWPFQY++ARP+LDWI SSLR +NVLS +ELSL+EQF
Sbjct: 4   ARLCSLVAELGYEGAGKLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLAELSLYEQF 63

Query: 267 LQEGKLLEGDDLDFAY 314
            ++GKLLEGDDLD AY
Sbjct: 64  QRDGKLLEGDDLDQAY 79


>dbj|BAA96972.1| unnamed protein product [Arabidopsis thaliana]
          Length = 671

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/76 (65%), Positives = 61/76 (80%)
 Frame = +3

Query: 87  AKLCNVXXXXXXXXXXKLDPDSFEWPFQYEEARPLLDWISSSLRSANVLSPSELSLHEQF 266
           A+LC++          KLDPDSFEWPFQY++ARP+LDWI SSLR +NVLS +ELSL+EQF
Sbjct: 4   ARLCSLVAELGYEGAGKLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLAELSLYEQF 63

Query: 267 LQEGKLLEGDDLDFAY 314
            ++GKLLEGDDLD AY
Sbjct: 64  QRDGKLLEGDDLDQAY 79


>ref|XP_002320600.1| predicted protein [Populus trichocarpa] gi|222861373|gb|EEE98915.1|
           predicted protein [Populus trichocarpa]
          Length = 661

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/77 (64%), Positives = 60/77 (77%)
 Frame = +3

Query: 84  GAKLCNVXXXXXXXXXXKLDPDSFEWPFQYEEARPLLDWISSSLRSANVLSPSELSLHEQ 263
           G +LC +           LDPDSFEWPFQY++ARP+LDWI SSLRS+NVLS S+LS +EQ
Sbjct: 3   GTRLCALLGELGYEGAETLDPDSFEWPFQYDDARPILDWICSSLRSSNVLSLSDLSRYEQ 62

Query: 264 FLQEGKLLEGDDLDFAY 314
           FLQE KLLEG+DL+FAY
Sbjct: 63  FLQEEKLLEGEDLEFAY 79


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