BLASTX nr result

ID: Coptis25_contig00023381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023381
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282273.2| PREDICTED: uncharacterized protein LOC100250...    59   1e-06
gb|AFK38649.1| unknown [Lotus japonicus]                               58   1e-06
ref|XP_003574747.1| PREDICTED: uncharacterized protein LOC100821...    55   9e-06

>ref|XP_002282273.2| PREDICTED: uncharacterized protein LOC100250137 [Vitis vinifera]
          Length = 306

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 24/43 (55%), Positives = 30/43 (69%)
 Frame = -2

Query: 446 VNNCASNCGSLPVDVPFTTRSGCRDRGFQDLLFCVNNTPMLHI 318
           VN C S CG++ +D PF  RSGC   GF+DLLFC+N+  M HI
Sbjct: 31  VNTCRSYCGNITIDYPFALRSGCGHPGFRDLLFCMNDVLMFHI 73


>gb|AFK38649.1| unknown [Lotus japonicus]
          Length = 103

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 24/47 (51%), Positives = 33/47 (70%)
 Frame = -2

Query: 458 SHGRVNNCASNCGSLPVDVPFTTRSGCRDRGFQDLLFCVNNTPMLHI 318
           S  + N+C + CG++ VD PF T+ GC   GF+DLLFC+N+  MLHI
Sbjct: 28  SSTQANSCRTYCGNITVDYPFATQYGCGHPGFRDLLFCINDVLMLHI 74


>ref|XP_003574747.1| PREDICTED: uncharacterized protein LOC100821126 [Brachypodium
           distachyon]
          Length = 315

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 23/43 (53%), Positives = 28/43 (65%)
 Frame = -2

Query: 446 VNNCASNCGSLPVDVPFTTRSGCRDRGFQDLLFCVNNTPMLHI 318
           V  C S CG++ VD PF  RSGC   G +DLLFC+N   MLH+
Sbjct: 32  VTTCRSFCGNITVDYPFALRSGCGHAGLRDLLFCINRVLMLHL 74


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