BLASTX nr result
ID: Coptis25_contig00023379
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00023379 (327 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002298628.1| predicted protein [Populus trichocarpa] gi|2... 110 2e-22 gb|ABK96713.1| unknown [Populus trichocarpa x Populus deltoides] 110 2e-22 ref|XP_002273946.1| PREDICTED: uncharacterized protein HI_1198 [... 100 1e-19 emb|CAN72004.1| hypothetical protein VITISV_012595 [Vitis vinifera] 100 1e-19 ref|XP_002509513.1| sua5, putative [Ricinus communis] gi|2235494... 98 8e-19 >ref|XP_002298628.1| predicted protein [Populus trichocarpa] gi|222845886|gb|EEE83433.1| predicted protein [Populus trichocarpa] Length = 322 Score = 110 bits (274), Expect = 2e-22 Identities = 59/97 (60%), Positives = 71/97 (73%) Frame = -2 Query: 293 SLGTTESSLSFRRSICTVNFSNNNFNTHHLPLTRLKVCTAAVKRNPKRLKYAGPRFNKDD 114 SL + S + RR + S +FNT P RL+V + A+KR+PKRLKY+ PRF K+D Sbjct: 14 SLSSLPSLTTLRRHVAPFP-SLVSFNTPKPP--RLRVLSMAIKRSPKRLKYSAPRFTKED 70 Query: 113 GFVYVEADPSGSDTWKLEPVIELLKQGAVGVVPTDTV 3 G +YVEAD GSDTWKLEPVIELLKQGAVGV+PTDTV Sbjct: 71 GLLYVEADELGSDTWKLEPVIELLKQGAVGVIPTDTV 107 >gb|ABK96713.1| unknown [Populus trichocarpa x Populus deltoides] Length = 313 Score = 110 bits (274), Expect = 2e-22 Identities = 59/97 (60%), Positives = 71/97 (73%) Frame = -2 Query: 293 SLGTTESSLSFRRSICTVNFSNNNFNTHHLPLTRLKVCTAAVKRNPKRLKYAGPRFNKDD 114 SL + S + RR + S +FNT P RL+V + A+KR+PKRLKY+ PRF K+D Sbjct: 14 SLSSLPSLTTLRRHVAPFP-SLVSFNTPKPP--RLRVLSMAIKRSPKRLKYSAPRFTKED 70 Query: 113 GFVYVEADPSGSDTWKLEPVIELLKQGAVGVVPTDTV 3 G +YVEAD GSDTWKLEPVIELLKQGAVGV+PTDTV Sbjct: 71 GLLYVEADELGSDTWKLEPVIELLKQGAVGVIPTDTV 107 >ref|XP_002273946.1| PREDICTED: uncharacterized protein HI_1198 [Vitis vinifera] gi|296082345|emb|CBI21350.3| unnamed protein product [Vitis vinifera] Length = 306 Score = 100 bits (249), Expect = 1e-19 Identities = 44/64 (68%), Positives = 55/64 (85%) Frame = -2 Query: 194 RLKVCTAAVKRNPKRLKYAGPRFNKDDGFVYVEADPSGSDTWKLEPVIELLKQGAVGVVP 15 R + A KR+PKRLKY+ PRF+K+DG +YVEADPSG+D+WKLEPV +LLK+GAVGV+P Sbjct: 36 RFRFVALAAKRSPKRLKYSAPRFSKEDGLLYVEADPSGTDSWKLEPVADLLKEGAVGVIP 95 Query: 14 TDTV 3 TDTV Sbjct: 96 TDTV 99 >emb|CAN72004.1| hypothetical protein VITISV_012595 [Vitis vinifera] Length = 329 Score = 100 bits (249), Expect = 1e-19 Identities = 44/64 (68%), Positives = 55/64 (85%) Frame = -2 Query: 194 RLKVCTAAVKRNPKRLKYAGPRFNKDDGFVYVEADPSGSDTWKLEPVIELLKQGAVGVVP 15 R + A KR+PKRLKY+ PRF+K+DG +YVEADPSG+D+WKLEPV +LLK+GAVGV+P Sbjct: 64 RFRFVALAAKRSPKRLKYSAPRFSKEDGLLYVEADPSGTDSWKLEPVADLLKEGAVGVIP 123 Query: 14 TDTV 3 TDTV Sbjct: 124 TDTV 127 >ref|XP_002509513.1| sua5, putative [Ricinus communis] gi|223549412|gb|EEF50900.1| sua5, putative [Ricinus communis] Length = 326 Score = 97.8 bits (242), Expect = 8e-19 Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%) Frame = -2 Query: 305 GGISSLGTTESSLSFRRSICTVNFSNN-NFNTHHLPLTRLKVCTAAVKRNPKRLKYAGPR 129 G S+L SS S + F++ +F++ P RL V A KR+PKRLKY+ PR Sbjct: 8 GRSSALSLCFSSSSSSLATYVAPFASRVSFHSRKPP--RLLVLAMATKRSPKRLKYSTPR 65 Query: 128 FNKDDGFVYVEADPSGSDTWKLEPVIELLKQGAVGVVPTDTV 3 F K+D VYVEAD SG+D+WKL+PVIELL +GAVGV+PTDTV Sbjct: 66 FTKEDALVYVEADASGADSWKLDPVIELLNEGAVGVIPTDTV 107