BLASTX nr result

ID: Coptis25_contig00023379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023379
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298628.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
gb|ABK96713.1| unknown [Populus trichocarpa x Populus deltoides]      110   2e-22
ref|XP_002273946.1| PREDICTED: uncharacterized protein HI_1198 [...   100   1e-19
emb|CAN72004.1| hypothetical protein VITISV_012595 [Vitis vinifera]   100   1e-19
ref|XP_002509513.1| sua5, putative [Ricinus communis] gi|2235494...    98   8e-19

>ref|XP_002298628.1| predicted protein [Populus trichocarpa] gi|222845886|gb|EEE83433.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score =  110 bits (274), Expect = 2e-22
 Identities = 59/97 (60%), Positives = 71/97 (73%)
 Frame = -2

Query: 293 SLGTTESSLSFRRSICTVNFSNNNFNTHHLPLTRLKVCTAAVKRNPKRLKYAGPRFNKDD 114
           SL +  S  + RR +     S  +FNT   P  RL+V + A+KR+PKRLKY+ PRF K+D
Sbjct: 14  SLSSLPSLTTLRRHVAPFP-SLVSFNTPKPP--RLRVLSMAIKRSPKRLKYSAPRFTKED 70

Query: 113 GFVYVEADPSGSDTWKLEPVIELLKQGAVGVVPTDTV 3
           G +YVEAD  GSDTWKLEPVIELLKQGAVGV+PTDTV
Sbjct: 71  GLLYVEADELGSDTWKLEPVIELLKQGAVGVIPTDTV 107


>gb|ABK96713.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 313

 Score =  110 bits (274), Expect = 2e-22
 Identities = 59/97 (60%), Positives = 71/97 (73%)
 Frame = -2

Query: 293 SLGTTESSLSFRRSICTVNFSNNNFNTHHLPLTRLKVCTAAVKRNPKRLKYAGPRFNKDD 114
           SL +  S  + RR +     S  +FNT   P  RL+V + A+KR+PKRLKY+ PRF K+D
Sbjct: 14  SLSSLPSLTTLRRHVAPFP-SLVSFNTPKPP--RLRVLSMAIKRSPKRLKYSAPRFTKED 70

Query: 113 GFVYVEADPSGSDTWKLEPVIELLKQGAVGVVPTDTV 3
           G +YVEAD  GSDTWKLEPVIELLKQGAVGV+PTDTV
Sbjct: 71  GLLYVEADELGSDTWKLEPVIELLKQGAVGVIPTDTV 107


>ref|XP_002273946.1| PREDICTED: uncharacterized protein HI_1198 [Vitis vinifera]
           gi|296082345|emb|CBI21350.3| unnamed protein product
           [Vitis vinifera]
          Length = 306

 Score =  100 bits (249), Expect = 1e-19
 Identities = 44/64 (68%), Positives = 55/64 (85%)
 Frame = -2

Query: 194 RLKVCTAAVKRNPKRLKYAGPRFNKDDGFVYVEADPSGSDTWKLEPVIELLKQGAVGVVP 15
           R +    A KR+PKRLKY+ PRF+K+DG +YVEADPSG+D+WKLEPV +LLK+GAVGV+P
Sbjct: 36  RFRFVALAAKRSPKRLKYSAPRFSKEDGLLYVEADPSGTDSWKLEPVADLLKEGAVGVIP 95

Query: 14  TDTV 3
           TDTV
Sbjct: 96  TDTV 99


>emb|CAN72004.1| hypothetical protein VITISV_012595 [Vitis vinifera]
          Length = 329

 Score =  100 bits (249), Expect = 1e-19
 Identities = 44/64 (68%), Positives = 55/64 (85%)
 Frame = -2

Query: 194 RLKVCTAAVKRNPKRLKYAGPRFNKDDGFVYVEADPSGSDTWKLEPVIELLKQGAVGVVP 15
           R +    A KR+PKRLKY+ PRF+K+DG +YVEADPSG+D+WKLEPV +LLK+GAVGV+P
Sbjct: 64  RFRFVALAAKRSPKRLKYSAPRFSKEDGLLYVEADPSGTDSWKLEPVADLLKEGAVGVIP 123

Query: 14  TDTV 3
           TDTV
Sbjct: 124 TDTV 127


>ref|XP_002509513.1| sua5, putative [Ricinus communis] gi|223549412|gb|EEF50900.1| sua5,
           putative [Ricinus communis]
          Length = 326

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
 Frame = -2

Query: 305 GGISSLGTTESSLSFRRSICTVNFSNN-NFNTHHLPLTRLKVCTAAVKRNPKRLKYAGPR 129
           G  S+L    SS S   +     F++  +F++   P  RL V   A KR+PKRLKY+ PR
Sbjct: 8   GRSSALSLCFSSSSSSLATYVAPFASRVSFHSRKPP--RLLVLAMATKRSPKRLKYSTPR 65

Query: 128 FNKDDGFVYVEADPSGSDTWKLEPVIELLKQGAVGVVPTDTV 3
           F K+D  VYVEAD SG+D+WKL+PVIELL +GAVGV+PTDTV
Sbjct: 66  FTKEDALVYVEADASGADSWKLDPVIELLNEGAVGVIPTDTV 107


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