BLASTX nr result

ID: Coptis25_contig00023375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023375
         (1393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147405.1| PREDICTED: uncharacterized protein LOC101208...   491   e-136
ref|XP_002519740.1| conserved hypothetical protein [Ricinus comm...   490   e-136
ref|XP_004165527.1| PREDICTED: uncharacterized LOC101208739 isof...   489   e-136
ref|XP_002316738.1| predicted protein [Populus trichocarpa] gi|2...   487   e-135
emb|CAN63784.1| hypothetical protein VITISV_009253 [Vitis vinifera]   483   e-134

>ref|XP_004147405.1| PREDICTED: uncharacterized protein LOC101208739 isoform 1 [Cucumis
            sativus] gi|449459344|ref|XP_004147406.1| PREDICTED:
            uncharacterized protein LOC101208739 isoform 2 [Cucumis
            sativus]
          Length = 373

 Score =  491 bits (1263), Expect = e-136
 Identities = 247/371 (66%), Positives = 286/371 (77%), Gaps = 4/371 (1%)
 Frame = -2

Query: 1329 MGFGMGXXXXXXLAMVATNILSLYHLTSSXXXXXXXXXXXQIPDHLHNQLQTIRSTITHL 1150
            MGF MG      +AMVATNILSLYHL SS            +PDHL  QLQTIR+TI HL
Sbjct: 1    MGFTMGLNLLLLVAMVATNILSLYHL-SSTLQSTKSPVSQPVPDHLIRQLQTIRATINHL 59

Query: 1149 THLRXXXXXXXXXXXXXXS-DLLLYSHFSPIASSCRNHPQLLHTYMNYTPYAICPLDTDL 973
            T L                 DL+LYS FSPIASSC  +P+LLH +MNYTP++ CP D+DL
Sbjct: 60   TRLHPTAAASASKTKLSIPSDLVLYSQFSPIASSCHTNPELLHKFMNYTPFSSCPSDSDL 119

Query: 972  AEALILRGCHPLPRRRCFSQTPSKLPSTLPTHPFPTSLPDTSIIWS-YTCTHFECLEK-- 802
            AEALILRGCHPLPRRRCF++TP K  S+LP +PF +SLP+++IIW  Y+C    CL +  
Sbjct: 120  AEALILRGCHPLPRRRCFAKTPQKPSSSLPQNPFASSLPESNIIWEKYSCKGLGCLNRLN 179

Query: 801  KNLGFDMKVESSKFTTFKSDLDLPVQQLFQIAKESRNVIRLGLDVGAGTGTFAAIMKLYN 622
             NLGFD   E +KF TFK++LDLP+ QL QIAK + +V+RLGLD+G GT TFAA MKLYN
Sbjct: 180  PNLGFDPSHEITKFMTFKTELDLPIPQLLQIAKAANSVLRLGLDIGGGTATFAARMKLYN 239

Query: 621  VTVMSTTMNLGAPYNEVIALRGLVPLHVPLQQRFPIFDGVLDLVRCSHAVNRWIPVKAME 442
            VT+++TTMNLGAPYNEV ALRGLVPLHVPLQQR PIFDGV+DLVRC HAVNRWIPVK+ME
Sbjct: 240  VTMVTTTMNLGAPYNEVAALRGLVPLHVPLQQRLPIFDGVMDLVRCGHAVNRWIPVKSME 299

Query: 441  FLFYDVDRVLRGGGYFWLDHFFSKGVDLDKVYTPLIGKLGYKKIKWATGIKSDSSGGKNG 262
            FLFYD+DRVLR GGY W DHFFSKGVDLDK+Y+PLI KLGY+K+KWAT  K+DS G KNG
Sbjct: 300  FLFYDLDRVLRVGGYLWFDHFFSKGVDLDKLYSPLITKLGYRKVKWATASKTDSGGLKNG 359

Query: 261  EVYLTALLQKP 229
            EVYLTALLQKP
Sbjct: 360  EVYLTALLQKP 370


>ref|XP_002519740.1| conserved hypothetical protein [Ricinus communis]
            gi|223541157|gb|EEF42713.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 377

 Score =  490 bits (1262), Expect = e-136
 Identities = 245/374 (65%), Positives = 285/374 (76%), Gaps = 7/374 (1%)
 Frame = -2

Query: 1329 MGFGMGXXXXXXLAMVATNILSLYHLTSSXXXXXXXXXXXQ--IPDHLHNQLQTIRSTIT 1156
            MGF MG      LAMVATNILSLYHLTS               +PDHL +QLQTIR+TI 
Sbjct: 1    MGFTMGLNLLLLLAMVATNILSLYHLTSPTLQSPKPPQPPLLQVPDHLLHQLQTIRATIN 60

Query: 1155 HLTHLRXXXXXXXXXXXXXXSDLLLYSHFSPIASSCRNHPQLLHTYMNYTPYAICPLDTD 976
            HLT  +               DLLLYS  SPIASSC NHP LLH YM YTP+++CPLD+D
Sbjct: 61   HLTRHQPPTTSDPTTATTIPPDLLLYSKLSPIASSCHNHPDLLHKYMTYTPFSLCPLDSD 120

Query: 975  -LAEALILRGCHPLPRRRCFSQTPSKLPSTLPTHPFPTSLPDTSIIWSY--TCTHFECL- 808
             LAE+LILRGCHPLPRRRCFS+TPSK PS+LP +PFP+S  D++++W    +C  F CL 
Sbjct: 121  NLAESLILRGCHPLPRRRCFSKTPSKPPSSLPHNPFPSSFLDSNVLWEKYPSCRSFSCLV 180

Query: 807  -EKKNLGFDMKVESSKFTTFKSDLDLPVQQLFQIAKESRNVIRLGLDVGAGTGTFAAIMK 631
             E  NLGFD+  E SKF T+K++LDLP+ QL Q+AK + +VIRLG+D+G GTGTFAA MK
Sbjct: 181  KENSNLGFDINTEISKFMTYKTELDLPIPQLLQVAKSASSVIRLGVDIGGGTGTFAARMK 240

Query: 630  LYNVTVMSTTMNLGAPYNEVIALRGLVPLHVPLQQRFPIFDGVLDLVRCSHAVNRWIPVK 451
            +YNVTV++TTMN   P NEV+A+RGLVPLHVPLQQR P+FDGV+DLVRC  AVNRWIP+K
Sbjct: 241  MYNVTVVTTTMNFNVPNNEVVAMRGLVPLHVPLQQRLPMFDGVVDLVRCGRAVNRWIPLK 300

Query: 450  AMEFLFYDVDRVLRGGGYFWLDHFFSKGVDLDKVYTPLIGKLGYKKIKWATGIKSDSSGG 271
             MEFL +DVDRVLRGGGY WLDHFFSK  DLDK+Y PLIGKLGYKK+KWA G K+DSSG 
Sbjct: 301  MMEFLLFDVDRVLRGGGYLWLDHFFSKRADLDKIYGPLIGKLGYKKVKWAVGNKTDSSGI 360

Query: 270  KNGEVYLTALLQKP 229
            KNGEVYLTALLQKP
Sbjct: 361  KNGEVYLTALLQKP 374


>ref|XP_004165527.1| PREDICTED: uncharacterized LOC101208739 isoform 1 [Cucumis sativus]
            gi|449516988|ref|XP_004165528.1| PREDICTED:
            uncharacterized LOC101208739 isoform 2 [Cucumis sativus]
          Length = 373

 Score =  489 bits (1259), Expect = e-136
 Identities = 246/371 (66%), Positives = 285/371 (76%), Gaps = 4/371 (1%)
 Frame = -2

Query: 1329 MGFGMGXXXXXXLAMVATNILSLYHLTSSXXXXXXXXXXXQIPDHLHNQLQTIRSTITHL 1150
            MGF MG      +AMVATNILSLYHL SS            +PDHL  QLQTIR+TI HL
Sbjct: 1    MGFTMGLNLLLLVAMVATNILSLYHL-SSTLQSTKSPVSQPVPDHLIRQLQTIRATINHL 59

Query: 1149 THLRXXXXXXXXXXXXXXS-DLLLYSHFSPIASSCRNHPQLLHTYMNYTPYAICPLDTDL 973
            T L                 DL+LYS FSPIASSC  +P+LLH +MNYTP++ CP D+DL
Sbjct: 60   TRLHPTAAASASKTKLSIPSDLVLYSQFSPIASSCHTNPELLHKFMNYTPFSSCPSDSDL 119

Query: 972  AEALILRGCHPLPRRRCFSQTPSKLPSTLPTHPFPTSLPDTSIIWS-YTCTHFECLEK-- 802
            AEALILRGCHPLPRRRCF++TP K  S+LP +PF +SLP+++IIW  Y+C    CL +  
Sbjct: 120  AEALILRGCHPLPRRRCFAKTPQKPSSSLPQNPFASSLPESNIIWGKYSCKSLGCLNRLN 179

Query: 801  KNLGFDMKVESSKFTTFKSDLDLPVQQLFQIAKESRNVIRLGLDVGAGTGTFAAIMKLYN 622
             NLGFD   E +KF TFK++LDLP+ QL QIAK + +V+RLGLD+G GT TFAA MKLYN
Sbjct: 180  PNLGFDPSHEITKFMTFKTELDLPIPQLLQIAKAANSVLRLGLDIGGGTATFAARMKLYN 239

Query: 621  VTVMSTTMNLGAPYNEVIALRGLVPLHVPLQQRFPIFDGVLDLVRCSHAVNRWIPVKAME 442
            VT+++TTMNLGAPYNEV ALRGLVPLHVPLQQR PIFDGV+DLVRC HAVNRWIP K+ME
Sbjct: 240  VTMVTTTMNLGAPYNEVAALRGLVPLHVPLQQRLPIFDGVMDLVRCGHAVNRWIPAKSME 299

Query: 441  FLFYDVDRVLRGGGYFWLDHFFSKGVDLDKVYTPLIGKLGYKKIKWATGIKSDSSGGKNG 262
            FLFYD+DRVLR GGY W DHFFSKGVDLDK+Y+PLI KLGY+K+KWAT  K+DS G KNG
Sbjct: 300  FLFYDLDRVLRVGGYLWFDHFFSKGVDLDKLYSPLITKLGYRKVKWATANKTDSGGLKNG 359

Query: 261  EVYLTALLQKP 229
            EVYLTALLQKP
Sbjct: 360  EVYLTALLQKP 370


>ref|XP_002316738.1| predicted protein [Populus trichocarpa] gi|222859803|gb|EEE97350.1|
            predicted protein [Populus trichocarpa]
          Length = 375

 Score =  487 bits (1253), Expect = e-135
 Identities = 243/374 (64%), Positives = 285/374 (76%), Gaps = 7/374 (1%)
 Frame = -2

Query: 1329 MGFGMGXXXXXXLAMVATNILSLYHLTSSXXXXXXXXXXXQIPDHLHNQLQTIRSTITHL 1150
            MGF MG      LAMVATNILSLYHL+S             +PDHL +QL TIR+TI+HL
Sbjct: 1    MGFTMGLNLVLVLAMVATNILSLYHLSSRVQSPKPPSDQQPVPDHLLHQLNTIRATISHL 60

Query: 1149 THLRXXXXXXXXXXXXXXS--DLLLYSHFSPIASSCRNHPQLLHTYMNYTPYAICPLDTD 976
            T  +                 DLLLYSH SPIASSC NHP LLH YM+Y+PY++CPLD+D
Sbjct: 61   TRHQPPSTTPSPTTTKPSVPQDLLLYSHLSPIASSCHNHPDLLHKYMSYSPYSLCPLDSD 120

Query: 975  L-AEALILRGCHPLPRRRCFSQTPSKLPSTLPTHPFPTSLPDTSIIWSY--TCTHFECLE 805
            L AE+LIL GCHPLPRRRCFS+TP K PS+LP +PFP+S  D+++IW+   TC  F CL 
Sbjct: 121  LLAESLILHGCHPLPRRRCFSKTPPKPPSSLPRNPFPSSFLDSNVIWNKYPTCRSFSCLA 180

Query: 804  KKN--LGFDMKVESSKFTTFKSDLDLPVQQLFQIAKESRNVIRLGLDVGAGTGTFAAIMK 631
            K+N  LGFD+  E SKF T+K++LDLP+ QL Q+AK + +VIRLG+D+G  TGTFAA MK
Sbjct: 181  KQNPSLGFDLNNEISKFMTYKTELDLPIPQLLQVAKSADSVIRLGIDIGGATGTFAARMK 240

Query: 630  LYNVTVMSTTMNLGAPYNEVIALRGLVPLHVPLQQRFPIFDGVLDLVRCSHAVNRWIPVK 451
             YNVTV++TTMN   P NEV+A+RGLVPLHVPLQ R P+FDGV+DLVRC HAVNRW+P+ 
Sbjct: 241  QYNVTVVTTTMNFNVPNNEVVAMRGLVPLHVPLQHRLPVFDGVVDLVRCGHAVNRWMPLT 300

Query: 450  AMEFLFYDVDRVLRGGGYFWLDHFFSKGVDLDKVYTPLIGKLGYKKIKWATGIKSDSSGG 271
             MEFLFYDVDRVLRGGGY W DHFFSK VDLDKV+ PLIGKLGYKK+KWA G K+DSSG 
Sbjct: 301  MMEFLFYDVDRVLRGGGYLWFDHFFSKRVDLDKVFGPLIGKLGYKKVKWAVGNKTDSSGL 360

Query: 270  KNGEVYLTALLQKP 229
            KNGEVYLTALLQKP
Sbjct: 361  KNGEVYLTALLQKP 374


>emb|CAN63784.1| hypothetical protein VITISV_009253 [Vitis vinifera]
          Length = 366

 Score =  483 bits (1244), Expect = e-134
 Identities = 240/368 (65%), Positives = 284/368 (77%), Gaps = 1/368 (0%)
 Frame = -2

Query: 1329 MGFGMGXXXXXXLAMVATNILSLYHLTSSXXXXXXXXXXXQIPDHLHNQLQTIRSTITHL 1150
            MG  MG      +AMVATNILSLYHL SS            +PDHL +QL TIR+T+THL
Sbjct: 1    MGLTMGLNLLLLVAMVATNILSLYHL-SSTIQSKPTPPPAPVPDHLRHQLNTIRATLTHL 59

Query: 1149 THLRXXXXXXXXXXXXXXSDLLLYSHFSPIASSCRNHPQLLHTYMNYTPYAICPLDTDLA 970
            T LR               DLLLY+H SP+ASSCR+HP LLHTYM YTP+++CP D+ LA
Sbjct: 60   TRLRSTSSSSASSATPS--DLLLYTHLSPMASSCRDHPDLLHTYMTYTPFSLCPDDSQLA 117

Query: 969  EALILRGCHPLPRRRCFSQTPSKLPSTLPTHPFPTSLPDTSIIWS-YTCTHFECLEKKNL 793
            E+LILRGCHPLPRRRCF++TPSKLPS+LP  PF + LPD++++W+ Y+C  F C +   L
Sbjct: 118  ESLILRGCHPLPRRRCFARTPSKLPSSLPADPF-SPLPDSAVLWTKYSCKSFSCFDG-GL 175

Query: 792  GFDMKVESSKFTTFKSDLDLPVQQLFQIAKESRNVIRLGLDVGAGTGTFAAIMKLYNVTV 613
            GF+MK+E+S+FT+  S+LDL + QL QIAK++ +VIR+GLD+G GTGTFAA MK YNVTV
Sbjct: 176  GFNMKLEASRFTSSXSNLDLTIPQLLQIAKDASSVIRIGLDIGGGTGTFAAKMKPYNVTV 235

Query: 612  MSTTMNLGAPYNEVIALRGLVPLHVPLQQRFPIFDGVLDLVRCSHAVNRWIPVKAMEFLF 433
            +STTM+ GAPYNE  ALRGLVPLH PLQQR P+FDGV+DLVRC  AVNRWIP  AMEF F
Sbjct: 236  VSTTMSQGAPYNEATALRGLVPLHAPLQQRLPVFDGVVDLVRCGRAVNRWIPTVAMEFFF 295

Query: 432  YDVDRVLRGGGYFWLDHFFSKGVDLDKVYTPLIGKLGYKKIKWATGIKSDSSGGKNGEVY 253
            YDVDRVLRGGGY WLDHFFSKG DL K+Y P+IGKLGYKK+KW    K+DSSG KNGEVY
Sbjct: 296  YDVDRVLRGGGYLWLDHFFSKGADLQKLYAPVIGKLGYKKVKWTMANKTDSSGVKNGEVY 355

Query: 252  LTALLQKP 229
            LTALLQKP
Sbjct: 356  LTALLQKP 363


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