BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023373
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39461.3| unnamed protein product [Vitis vinifera]              107   8e-22
ref|XP_002269673.1| PREDICTED: pentatricopeptide repeat-containi...   107   8e-22
ref|XP_004136857.1| PREDICTED: pentatricopeptide repeat-containi...   105   3e-21
ref|NP_849590.1| uncharacterized protein [Arabidopsis thaliana] ...   103   1e-20
ref|NP_563712.1| uncharacterized protein [Arabidopsis thaliana] ...   103   1e-20

>emb|CBI39461.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  107 bits (268), Expect = 8e-22
 Identities = 52/78 (66%), Positives = 62/78 (79%)
 Frame = -2

Query: 235 ESRRDTSDSLKEPPGRNVSKKDKIKFLVDTLLGLKESKEAVYGALDAWVAWEKTFPLASL 56
           +S +D +   K   G NVS+KDKI FLV TLL LK+SKEAVYGALDAWVAWE+ FP+ASL
Sbjct: 61  DSGKDAASVHKHQIGENVSRKDKINFLVTTLLDLKDSKEAVYGALDAWVAWEQNFPIASL 120

Query: 55  RIAMGTLEKEQEWHRVIQ 2
           +  + TLEKEQ+WHRVIQ
Sbjct: 121 KRVLITLEKEQQWHRVIQ 138


>ref|XP_002269673.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
           chloroplastic-like isoform 1 [Vitis vinifera]
          Length = 300

 Score =  107 bits (268), Expect = 8e-22
 Identities = 52/78 (66%), Positives = 62/78 (79%)
 Frame = -2

Query: 235 ESRRDTSDSLKEPPGRNVSKKDKIKFLVDTLLGLKESKEAVYGALDAWVAWEKTFPLASL 56
           +S +D +   K   G NVS+KDKI FLV TLL LK+SKEAVYGALDAWVAWE+ FP+ASL
Sbjct: 65  DSGKDAASVHKHQIGENVSRKDKINFLVTTLLDLKDSKEAVYGALDAWVAWEQNFPIASL 124

Query: 55  RIAMGTLEKEQEWHRVIQ 2
           +  + TLEKEQ+WHRVIQ
Sbjct: 125 KRVLITLEKEQQWHRVIQ 142


>ref|XP_004136857.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
           chloroplastic-like [Cucumis sativus]
          Length = 302

 Score =  105 bits (263), Expect = 3e-21
 Identities = 47/77 (61%), Positives = 62/77 (80%)
 Frame = -2

Query: 232 SRRDTSDSLKEPPGRNVSKKDKIKFLVDTLLGLKESKEAVYGALDAWVAWEKTFPLASLR 53
           S ++  D  K   G+N+S+KDKI FLV+TLL L++SKEAVYGALDAWVAWE+ FP+ASL+
Sbjct: 72  SEQNIGDIRKHQIGKNISRKDKIHFLVNTLLDLRDSKEAVYGALDAWVAWEQVFPIASLK 131

Query: 52  IAMGTLEKEQEWHRVIQ 2
             +  LEKEQ+WHR++Q
Sbjct: 132 HVLAALEKEQQWHRIVQ 148


>ref|NP_849590.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332189598|gb|AEE27719.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 384

 Score =  103 bits (257), Expect = 1e-20
 Identities = 51/87 (58%), Positives = 65/87 (74%), Gaps = 9/87 (10%)
 Frame = -2

Query: 235 ESRRDTSDSLK----EPP-----GRNVSKKDKIKFLVDTLLGLKESKEAVYGALDAWVAW 83
           E   D SDS K    E P     G N+ KKDKIKFLV+TLL ++++KEAVYGALDAWVAW
Sbjct: 114 EDEEDFSDSSKKGNAENPRKHQIGENIPKKDKIKFLVNTLLDIEDNKEAVYGALDAWVAW 173

Query: 82  EKTFPLASLRIAMGTLEKEQEWHRVIQ 2
           E+ FP+ASL+I + +LEKE +WHR++Q
Sbjct: 174 ERNFPIASLKIVIASLEKEHQWHRMVQ 200


>ref|NP_563712.1| uncharacterized protein [Arabidopsis thaliana]
           gi|13430646|gb|AAK25945.1|AF360235_1 unknown protein
           [Arabidopsis thaliana] gi|14532820|gb|AAK64092.1|
           unknown protein [Arabidopsis thaliana]
           gi|332189597|gb|AEE27718.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 381

 Score =  103 bits (257), Expect = 1e-20
 Identities = 51/87 (58%), Positives = 65/87 (74%), Gaps = 9/87 (10%)
 Frame = -2

Query: 235 ESRRDTSDSLK----EPP-----GRNVSKKDKIKFLVDTLLGLKESKEAVYGALDAWVAW 83
           E   D SDS K    E P     G N+ KKDKIKFLV+TLL ++++KEAVYGALDAWVAW
Sbjct: 114 EDEEDFSDSSKKGNAENPRKHQIGENIPKKDKIKFLVNTLLDIEDNKEAVYGALDAWVAW 173

Query: 82  EKTFPLASLRIAMGTLEKEQEWHRVIQ 2
           E+ FP+ASL+I + +LEKE +WHR++Q
Sbjct: 174 ERNFPIASLKIVIASLEKEHQWHRMVQ 200