BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023372
         (775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    58   3e-06
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    56   1e-05
ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [S...    56   1e-05

>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 31/77 (40%), Positives = 42/77 (54%)
 Frame = -2

Query: 234 WNKPEASKAKLNADGSVAPKGSGHGVIIQDEEGGVIAGLNGSGGLESVIYQELKAIEVGL 55
           W KP+    KLN DGSV  + +G G +++D EG  I        L+ +   EL AI  GL
Sbjct: 274 WKKPDVGWIKLNTDGSVDRQHAGFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIWRGL 333

Query: 54  ILCENMLIKQVQVESDS 4
           +L   + IK + VESDS
Sbjct: 334 VLALGLGIKVIWVESDS 350


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 51/222 (22%), Positives = 91/222 (40%), Gaps = 5/222 (2%)
 Frame = -2

Query: 654 CCLCRSSREFSKHRFFECAYSMELLLNIKHLLNISTDSRNAN*E*WSSILRLCRRHGPIY 475
           CC CR   E S H F +C  +++L   +    +   D        +SSIL + R    + 
Sbjct: 114 CCFCRKQAETSSHIFLQCPVTLQLWDWLLKATDQHLD--------FSSILNISRM---VQ 162

Query: 474 EVYKVYICVVADAIWKERNAQRFQNQSKPVAVVFHKLCRDF--KAYMQTILPELTDSSDM 301
            V    I  +  +IW E N + F    KP++ +F+ +  +    ++M  I+   +   D 
Sbjct: 163 HVMNSAIVHIMWSIWLECNNKYFDGVQKPMSTLFNTILAEVLRLSFMLDIVKGASSMQDF 222

Query: 300 R-TLLSSIGLQIRLNTPVQKQTAWNKPEASKAKLNADGSV--APKGSGHGVIIQDEEGGV 130
           +   L SI  +     P  ++  W  P     K+N DGSV  +P     GVI +  +   
Sbjct: 223 KLARLFSIPFKTNRVNPC-REIIWVPPHGGCMKINCDGSVVGSPSCGSIGVIFRASQTMF 281

Query: 129 IAGLNGSGGLESVIYQELKAIEVGLILCENMLIKQVQVESDS 4
                 + G  + +  E  A    +   + + +  + +E+DS
Sbjct: 282 CGAFAQNIGYATALEAEYSACMFAIEKAKELHLTNIWIETDS 323


>ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [Sorghum bicolor]
           gi|241920472|gb|EER93616.1| hypothetical protein
           SORBIDRAFT_01g011130 [Sorghum bicolor]
          Length = 463

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 4/221 (1%)
 Frame = -2

Query: 654 CCLCRSSREFSKHRFFECAYSMELLLNIKHLLNISTDSRN-AN*E*WSSILRLCRRHGPI 478
           C +C    E   H FF+C  + +    +  LL +ST+    AN      ++    R    
Sbjct: 183 CPVCNQVGEDGGHLFFKCGMARQ----VWELLGLSTEREVLANFYTPIDVVEFILRAS-- 236

Query: 477 YEVYKVYICVVADAIWKERNAQRFQNQSKPVAVVFHKLCRDFKAYMQTILPELTDSSDMR 298
            E  K+ + V     W ERNA R +++ +        L R  + Y+Q          +MR
Sbjct: 237 -ESRKLMMIVALWYTWSERNAIREEDRRRSPQT----LARCVELYVQ----------EMR 281

Query: 297 TLLSSIGLQIRLNTPVQKQTAWNKPEASKAKLNADGSVAP--KGSGHGVIIQDEEGGVI- 127
           T  ++           Q+Q  W+KP     KLN DGS +P  +    GV+I+D EG VI 
Sbjct: 282 TTETTANPTANQE---QQQYKWSKPPVDILKLNCDGSFSPETRAGSWGVLIRDHEGDVIM 338

Query: 126 AGLNGSGGLESVIYQELKAIEVGLILCENMLIKQVQVESDS 4
           +G      L + +  EL A   G+ L  N+ I ++ +E+D+
Sbjct: 339 SGRGRVNHLMTPMQAELIACLQGVQLAANLGIGRLILETDA 379