BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023367
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]   113   1e-23
ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containi...   112   4e-23
emb|CBI39664.3| unnamed protein product [Vitis vinifera]              100   1e-19
ref|XP_002329996.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
ref|XP_002318926.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18

>emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]
          Length = 730

 Score =  113 bits (283), Expect = 1e-23
 Identities = 57/134 (42%), Positives = 83/134 (61%), Gaps = 12/134 (8%)
 Frame = +2

Query: 56  MTLNFSSLIISKQIPRWVCFISCITTHAT------------TQNYPNSPEFESKTRFXXX 199
           M +  SSL +S++IP+WV  I+ +++ ++            T+  PN  EFE K +F   
Sbjct: 1   MAVKLSSLTLSRRIPKWVPLIASMSSISSANRIQAVPEIDQTKTPPNDNEFEPKFQFLRN 60

Query: 200 XXXXXXXXXHILDSTKDLKSSVNIFKWATSQKRFYHTADTYFFMIMKLGMAGNVQDMEFF 379
                     +LD+T DL S++ +FKWA+ QKRF HTADTYF +I+KLGM G ++DME F
Sbjct: 61  RLMPDDLI-RVLDTTHDLNSAIKVFKWASRQKRFRHTADTYFRVILKLGMGGKIEDMEAF 119

Query: 380 CNEMAKDKCPHAEE 421
           C+EM ++KCP  EE
Sbjct: 120 CSEMVREKCPGGEE 133


>ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62590-like [Vitis vinifera]
          Length = 730

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/134 (42%), Positives = 81/134 (60%), Gaps = 12/134 (8%)
 Frame = +2

Query: 56  MTLNFSSLIISKQIPRWVCFISCITTHAT------------TQNYPNSPEFESKTRFXXX 199
           M +  SSL +S +IP+WV  I+ +++ +             T+  PN  EFE K +F   
Sbjct: 1   MAVKLSSLTLSSRIPKWVPLIASMSSISCANRIQAVPEIDQTKTPPNDNEFEPKFQFLRN 60

Query: 200 XXXXXXXXXHILDSTKDLKSSVNIFKWATSQKRFYHTADTYFFMIMKLGMAGNVQDMEFF 379
                     +LD+T DL S++ +FKWA+ QKRF HTADTYF +I+KLGM G ++DME F
Sbjct: 61  RLMPDDLI-RVLDTTHDLNSAIKVFKWASRQKRFRHTADTYFRVILKLGMGGKIEDMEAF 119

Query: 380 CNEMAKDKCPHAEE 421
           C+EM ++KCP  EE
Sbjct: 120 CSEMVREKCPGGEE 133


>emb|CBI39664.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  100 bits (249), Expect = 1e-19
 Identities = 47/93 (50%), Positives = 62/93 (66%)
 Frame = +2

Query: 143 TQNYPNSPEFESKTRFXXXXXXXXXXXXHILDSTKDLKSSVNIFKWATSQKRFYHTADTY 322
           T+  PN  EFE K +F             +LD+T DL S++ +FKWA+ QKRF HTADTY
Sbjct: 19  TKTPPNDNEFEPKFQFLRNRLMPDDLI-RVLDTTHDLNSAIKVFKWASRQKRFRHTADTY 77

Query: 323 FFMIMKLGMAGNVQDMEFFCNEMAKDKCPHAEE 421
           F +I+KLGM G ++DME FC+EM ++KCP  EE
Sbjct: 78  FRVILKLGMGGKIEDMEAFCSEMVREKCPGGEE 110


>ref|XP_002329996.1| predicted protein [Populus trichocarpa] gi|222871421|gb|EEF08552.1|
           predicted protein [Populus trichocarpa]
          Length = 725

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 52/121 (42%), Positives = 72/121 (59%), Gaps = 10/121 (8%)
 Frame = +2

Query: 89  KQIPRWV---CFISCITTHAT-------TQNYPNSPEFESKTRFXXXXXXXXXXXXHILD 238
           K+IP+WV    FIS ++   T        QN PN P+F+ K +              +L 
Sbjct: 9   KRIPKWVNLKAFISSVSCTNTIQINPEINQNTPNFPDFDVKIQ-SLRNKLYPDNLIKVLK 67

Query: 239 STKDLKSSVNIFKWATSQKRFYHTADTYFFMIMKLGMAGNVQDMEFFCNEMAKDKCPHAE 418
           ST D+ S+V IFKWA  Q++F HTADTY+++I KLGMAGNV++ME FC  M K++C   E
Sbjct: 68  STSDVNSAVKIFKWAALQRKFNHTADTYYWIIFKLGMAGNVEEMEGFCQNMVKERCTGEE 127

Query: 419 E 421
           +
Sbjct: 128 D 128


>ref|XP_002318926.1| predicted protein [Populus trichocarpa] gi|222857302|gb|EEE94849.1|
           predicted protein [Populus trichocarpa]
          Length = 724

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/123 (40%), Positives = 73/123 (59%), Gaps = 10/123 (8%)
 Frame = +2

Query: 83  ISKQIPRWVCFISCITTHATT----------QNYPNSPEFESKTRFXXXXXXXXXXXXHI 232
           +SK IP+W+   S I++ + T          QN PN  +F++K +              +
Sbjct: 7   LSKTIPKWLNLKSFISSVSCTNAIQINPEINQNAPNITDFDAKIQ-SLRNKLCPDYLIKV 65

Query: 233 LDSTKDLKSSVNIFKWATSQKRFYHTADTYFFMIMKLGMAGNVQDMEFFCNEMAKDKCPH 412
           L ST D+ S+V +FKWA+ Q+RF HT DTY+++I KLGMA NV++ME FC  M KD+CP 
Sbjct: 66  LKSTSDINSAVKLFKWASLQRRFNHTDDTYYWIIFKLGMAENVEEMEGFCQNMVKDRCPG 125

Query: 413 AEE 421
            E+
Sbjct: 126 VED 128