BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023365
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612658.1| 50S ribosomal protein L35 [Medicago truncatu...    93   5e-17
ref|NP_568647.1| Ribosomal protein L35 [Arabidopsis thaliana] gi...    92   9e-17
ref|XP_002863467.1| structural constituent of ribosome [Arabidop...    92   9e-17
ref|XP_003574407.1| PREDICTED: uncharacterized protein LOC100844...    91   1e-16
tpg|DAA46532.1| TPA: hypothetical protein ZEAMMB73_280712 [Zea m...    90   3e-16

>ref|XP_003612658.1| 50S ribosomal protein L35 [Medicago truncatula]
           gi|355513993|gb|AES95616.1| 50S ribosomal protein L35
           [Medicago truncatula]
          Length = 157

 Score = 92.8 bits (229), Expect = 5e-17
 Identities = 45/57 (78%), Positives = 47/57 (82%)
 Frame = -3

Query: 337 SYKSRFKTLKDGTIRRWHEGKLHNAHLKSKAAKRRLRLPALVHPAYAKVMKKLNFYG 167
           SYKSRF+ + DGT RRW EGK HNAHLKSK AKRRLRLPALV  AYAKVMKKL F G
Sbjct: 101 SYKSRFRLMNDGTFRRWREGKRHNAHLKSKIAKRRLRLPALVPVAYAKVMKKLGFCG 157


>ref|NP_568647.1| Ribosomal protein L35 [Arabidopsis thaliana]
           gi|21593524|gb|AAM65491.1| unknown [Arabidopsis
           thaliana] gi|26450411|dbj|BAC42320.1| unknown protein
           [Arabidopsis thaliana] gi|28827502|gb|AAO50595.1|
           unknown protein [Arabidopsis thaliana]
           gi|332007889|gb|AED95272.1| Ribosomal protein L35
           [Arabidopsis thaliana]
          Length = 173

 Score = 92.0 bits (227), Expect = 9e-17
 Identities = 44/55 (80%), Positives = 46/55 (83%)
 Frame = -3

Query: 337 SYKSRFKTLKDGTIRRWHEGKLHNAHLKSKAAKRRLRLPALVHPAYAKVMKKLNF 173
           S+K RFK L DGTIRRW EGK HNAHLKSK +KRRLR P LV PAYAKVMKKLNF
Sbjct: 117 SFKDRFKPLNDGTIRRWKEGKRHNAHLKSKKSKRRLRQPGLVPPAYAKVMKKLNF 171


>ref|XP_002863467.1| structural constituent of ribosome [Arabidopsis lyrata subsp.
           lyrata] gi|297309302|gb|EFH39726.1| structural
           constituent of ribosome [Arabidopsis lyrata subsp.
           lyrata]
          Length = 170

 Score = 92.0 bits (227), Expect = 9e-17
 Identities = 44/55 (80%), Positives = 46/55 (83%)
 Frame = -3

Query: 337 SYKSRFKTLKDGTIRRWHEGKLHNAHLKSKAAKRRLRLPALVHPAYAKVMKKLNF 173
           S+K RFK L DGTIRRW EGK HNAHLKSK +KRRLR P LV PAYAKVMKKLNF
Sbjct: 114 SFKDRFKPLNDGTIRRWKEGKRHNAHLKSKKSKRRLRQPGLVPPAYAKVMKKLNF 168


>ref|XP_003574407.1| PREDICTED: uncharacterized protein LOC100844694 [Brachypodium
           distachyon]
          Length = 162

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 46/57 (80%), Positives = 47/57 (82%)
 Frame = -3

Query: 337 SYKSRFKTLKDGTIRRWHEGKLHNAHLKSKAAKRRLRLPALVHPAYAKVMKKLNFYG 167
           S K RFKTLKDG IRRW  GK HNAHLKSK AKRRLR PALVH AYAKV+KKLNF G
Sbjct: 106 SMKFRFKTLKDGQIRRWCAGKRHNAHLKSKQAKRRLRKPALVHLAYAKVIKKLNFCG 162


>tpg|DAA46532.1| TPA: hypothetical protein ZEAMMB73_280712 [Zea mays]
          Length = 62

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 43/57 (75%), Positives = 47/57 (82%)
 Frame = -3

Query: 337 SYKSRFKTLKDGTIRRWHEGKLHNAHLKSKAAKRRLRLPALVHPAYAKVMKKLNFYG 167
           S K RF+T+KDG +RRW  GK HNAHLKSK AKRRLR PALVH AYAKV+KKLNF G
Sbjct: 6   SMKFRFRTMKDGQVRRWRAGKRHNAHLKSKEAKRRLRKPALVHLAYAKVIKKLNFCG 62