BLASTX nr result

ID: Coptis25_contig00023360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023360
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299499.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
ref|XP_002303620.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
emb|CBI40464.3| unnamed protein product [Vitis vinifera]              122   4e-26
ref|XP_002279915.1| PREDICTED: BTB/POZ domain-containing protein...   122   4e-26
ref|XP_002511951.1| atpob1, putative [Ricinus communis] gi|22354...   121   7e-26

>ref|XP_002299499.1| predicted protein [Populus trichocarpa] gi|222846757|gb|EEE84304.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  122 bits (306), Expect = 3e-26
 Identities = 59/83 (71%), Positives = 66/83 (79%)
 Frame = -1

Query: 249 FPCMNCRKLKKVLSCNDFDPELASKLVLEALFFKAETRHRQHILCGEDPVPIKQRFVERA 70
           FP M CRKLKKVL+CND  PE ASK+VLEALFFKAET HRQH L  + P  + +RFVERA
Sbjct: 205 FPYMTCRKLKKVLNCNDLHPEFASKVVLEALFFKAETPHRQHALAVDVPNAVNRRFVERA 264

Query: 69  YKYRPVNVVGFKHPRRQCVVYLD 1
           YKYRPV VV F+ P +QCVVYLD
Sbjct: 265 YKYRPVKVVDFELPYQQCVVYLD 287


>ref|XP_002303620.1| predicted protein [Populus trichocarpa] gi|222841052|gb|EEE78599.1|
           predicted protein [Populus trichocarpa]
          Length = 561

 Score =  122 bits (306), Expect = 3e-26
 Identities = 57/83 (68%), Positives = 67/83 (80%)
 Frame = -1

Query: 249 FPCMNCRKLKKVLSCNDFDPELASKLVLEALFFKAETRHRQHILCGEDPVPIKQRFVERA 70
           FP M CRKLKKVL+CN+F PELASK+VLEALFFKAET HRQ  +  ++P  + +RFVERA
Sbjct: 353 FPYMTCRKLKKVLNCNEFHPELASKVVLEALFFKAETSHRQRAIAADEPNAVNRRFVERA 412

Query: 69  YKYRPVNVVGFKHPRRQCVVYLD 1
           YKYRPV VV  + P +QCVVYLD
Sbjct: 413 YKYRPVKVVELELPHQQCVVYLD 435


>emb|CBI40464.3| unnamed protein product [Vitis vinifera]
          Length = 501

 Score =  122 bits (305), Expect = 4e-26
 Identities = 60/83 (72%), Positives = 65/83 (78%)
 Frame = -1

Query: 249 FPCMNCRKLKKVLSCNDFDPELASKLVLEALFFKAETRHRQHILCGEDPVPIKQRFVERA 70
           FP M CRKLKKVL+CNDFD +LASK VLEALFFKAE  HRQ  L  ED     +RFVERA
Sbjct: 293 FPYMTCRKLKKVLTCNDFDHDLASKAVLEALFFKAEAPHRQRSLAAEDSALTNRRFVERA 352

Query: 69  YKYRPVNVVGFKHPRRQCVVYLD 1
           YKYRPV VV F+ PR+QCVVYLD
Sbjct: 353 YKYRPVKVVEFELPRQQCVVYLD 375


>ref|XP_002279915.1| PREDICTED: BTB/POZ domain-containing protein POB1-like [Vitis
           vinifera]
          Length = 553

 Score =  122 bits (305), Expect = 4e-26
 Identities = 60/83 (72%), Positives = 65/83 (78%)
 Frame = -1

Query: 249 FPCMNCRKLKKVLSCNDFDPELASKLVLEALFFKAETRHRQHILCGEDPVPIKQRFVERA 70
           FP M CRKLKKVL+CNDFD +LASK VLEALFFKAE  HRQ  L  ED     +RFVERA
Sbjct: 345 FPYMTCRKLKKVLTCNDFDHDLASKAVLEALFFKAEAPHRQRSLAAEDSALTNRRFVERA 404

Query: 69  YKYRPVNVVGFKHPRRQCVVYLD 1
           YKYRPV VV F+ PR+QCVVYLD
Sbjct: 405 YKYRPVKVVEFELPRQQCVVYLD 427


>ref|XP_002511951.1| atpob1, putative [Ricinus communis] gi|223549131|gb|EEF50620.1|
           atpob1, putative [Ricinus communis]
          Length = 549

 Score =  121 bits (303), Expect = 7e-26
 Identities = 58/83 (69%), Positives = 67/83 (80%)
 Frame = -1

Query: 249 FPCMNCRKLKKVLSCNDFDPELASKLVLEALFFKAETRHRQHILCGEDPVPIKQRFVERA 70
           FP M CRKLKKVL+C+DFD ++ASKLVLEALFFKAE  HRQ  L  E+   + +RFVERA
Sbjct: 341 FPYMTCRKLKKVLTCSDFDHDVASKLVLEALFFKAEAPHRQRSLAAEESASLNRRFVERA 400

Query: 69  YKYRPVNVVGFKHPRRQCVVYLD 1
           YKYRPV VV F+ PR+QCVVYLD
Sbjct: 401 YKYRPVKVVEFELPRQQCVVYLD 423


Top