BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023356
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_565633.1| argonaute 4 [Arabidopsis thaliana] gi|334184499...    61   1e-11
ref|XP_002308843.1| argonaute protein group [Populus trichocarpa...    51   8e-11
ref|XP_002310956.1| argonaute protein group [Populus trichocarpa...    56   8e-11
ref|XP_002880875.1| hypothetical protein ARALYDRAFT_481584 [Arab...    59   1e-10
gb|AFV15381.1| AGO4A [Solanum lycopersicum]                            60   2e-10

>ref|NP_565633.1| argonaute 4 [Arabidopsis thaliana] gi|334184499|ref|NP_001189613.1|
           argonaute 4 [Arabidopsis thaliana]
           gi|75216962|sp|Q9ZVD5.2|AGO4_ARATH RecName: Full=Protein
           argonaute 4; AltName: Full=Protein OVEREXPRESSOR OF
           CATIONIC PEROXIDASE 11 gi|14334816|gb|AAK59586.1|
           putative Argonaute (AGO1) protein [Arabidopsis thaliana]
           gi|15293199|gb|AAK93710.1| putative argonaute AGO1
           protein [Arabidopsis thaliana]
           gi|20197419|gb|AAC77862.2| Argonaute (AGO1)-like protein
           [Arabidopsis thaliana] gi|330252834|gb|AEC07928.1|
           argonaute 4 [Arabidopsis thaliana]
           gi|330252835|gb|AEC07929.1| argonaute 4 [Arabidopsis
           thaliana]
          Length = 924

 Score = 61.2 bits (147), Expect(2) = 1e-11
 Identities = 29/57 (50%), Positives = 34/57 (59%)
 Frame = -2

Query: 279 IAVNFSRYSRVRMFCNDLITCGKQKGLNIAHPLQIFEEDRQMECVPPAVRVEKMFKD 109
           + VNFS    VR   +DLI  G  KG+ IA P Q+FEE  Q    PP +RVE MFKD
Sbjct: 510 VVVNFSARCNVRQVVDDLIKIGGSKGIEIASPFQVFEEGNQFRRAPPMIRVENMFKD 566



 Score = 32.7 bits (73), Expect(2) = 1e-11
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -3

Query: 80  RFILCFLPEKKTSDLYG 30
           +FILC LP+KK SDLYG
Sbjct: 576 QFILCVLPDKKNSDLYG 592


>ref|XP_002308843.1| argonaute protein group [Populus trichocarpa]
           gi|222854819|gb|EEE92366.1| argonaute protein group
           [Populus trichocarpa]
          Length = 930

 Score = 50.8 bits (120), Expect(2) = 8e-11
 Identities = 26/54 (48%), Positives = 33/54 (61%)
 Frame = -2

Query: 273 VNFSRYSRVRMFCNDLITCGKQKGLNIAHPLQIFEEDRQMECVPPAVRVEKMFK 112
           VNFS    VR    DLI  G+ KG+ I+ P+ + EE+ Q    PP VRVEKMF+
Sbjct: 516 VNFSARCDVRGLVRDLIRFGEMKGILISDPVDVVEENGQFRRAPPLVRVEKMFE 569



 Score = 40.4 bits (93), Expect(2) = 8e-11
 Identities = 14/28 (50%), Positives = 22/28 (78%)
 Frame = -3

Query: 113 RMMECFPNKPLRFILCFLPEKKTSDLYG 30
           ++ + FPN P RF++C LP++K SD+YG
Sbjct: 570 QIQKAFPNAPPRFLVCLLPDRKNSDIYG 597


>ref|XP_002310956.1| argonaute protein group [Populus trichocarpa]
           gi|222850776|gb|EEE88323.1| argonaute protein group
           [Populus trichocarpa]
          Length = 923

 Score = 55.8 bits (133), Expect(2) = 8e-11
 Identities = 25/54 (46%), Positives = 35/54 (64%)
 Frame = -2

Query: 273 VNFSRYSRVRMFCNDLITCGKQKGLNIAHPLQIFEEDRQMECVPPAVRVEKMFK 112
           VNFS    +R  CN+LI CG  KG++I++P ++FEE  Q       VRVE+MF+
Sbjct: 500 VNFSARCDIRYLCNNLIKCGDMKGISISNPFEVFEESPQFRRESAPVRVERMFE 553



 Score = 35.4 bits (80), Expect(2) = 8e-11
 Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
 Frame = -3

Query: 113 RMMECFPNK---PLRFILCFLPEKKTSDLYG 30
           RM E   +K   P +F+LC LPE+K SD+YG
Sbjct: 550 RMFEAIKSKLPGPPQFLLCILPERKNSDIYG 580


>ref|XP_002880875.1| hypothetical protein ARALYDRAFT_481584 [Arabidopsis lyrata subsp.
           lyrata] gi|297326714|gb|EFH57134.1| hypothetical protein
           ARALYDRAFT_481584 [Arabidopsis lyrata subsp. lyrata]
          Length = 924

 Score = 58.5 bits (140), Expect(2) = 1e-10
 Identities = 29/57 (50%), Positives = 33/57 (57%)
 Frame = -2

Query: 279 IAVNFSRYSRVRMFCNDLITCGKQKGLNIAHPLQIFEEDRQMECVPPAVRVEKMFKD 109
           + VNFS    VR   +DLI  G  KG+ IA P Q+FEE  Q    PP  RVE MFKD
Sbjct: 510 VVVNFSARCNVRQVVDDLIKIGGSKGIEIAPPFQVFEEGNQFRRAPPMNRVENMFKD 566



 Score = 32.0 bits (71), Expect(2) = 1e-10
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -3

Query: 80  RFILCFLPEKKTSDLYG 30
           +FILC LPEKK  DLYG
Sbjct: 576 QFILCVLPEKKNCDLYG 592


>gb|AFV15381.1| AGO4A [Solanum lycopersicum]
          Length = 909

 Score = 59.7 bits (143), Expect(2) = 2e-10
 Identities = 28/54 (51%), Positives = 35/54 (64%)
 Frame = -2

Query: 273 VNFSRYSRVRMFCNDLITCGKQKGLNIAHPLQIFEEDRQMECVPPAVRVEKMFK 112
           VNFS    V+   +DLI CGKQKG+ +  P  +FEE  Q+   PP VRVEKMF+
Sbjct: 497 VNFSARCNVQGLVSDLIKCGKQKGIMVEDPFDVFEESPQVRRAPPLVRVEKMFE 550



 Score = 30.0 bits (66), Expect(2) = 2e-10
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -3

Query: 95  PNKPLRFILCFLPEKKTSDLYG 30
           P  P +F+LC LPE+K  D+YG
Sbjct: 557 PGAP-KFLLCLLPERKNCDVYG 577