BLASTX nr result

ID: Coptis25_contig00023335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023335
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263275.2| PREDICTED: uncharacterized protein LOC100257...    75   6e-12
emb|CBI29698.3| unnamed protein product [Vitis vinifera]               75   6e-12
ref|XP_002526444.1| ATP binding protein, putative [Ricinus commu...    74   1e-11
ref|XP_002331101.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002328781.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11

>ref|XP_002263275.2| PREDICTED: uncharacterized protein LOC100257434 [Vitis vinifera]
          Length = 337

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 37/59 (62%), Positives = 45/59 (76%)
 Frame = +2

Query: 2   EGDMVFKYQVLPEDLDTLISVKCDEDLQNMLAEYDRQDRKSSNSDGNGSPLLRAFLFPS 178
           +GD+V KYQ+ PEDLD L+SVK DEDL++ML EYDRQ       +G G+P LRAFLFPS
Sbjct: 88  DGDLVLKYQLSPEDLDALVSVKSDEDLRHMLDEYDRQ-------EGEGTPRLRAFLFPS 139


>emb|CBI29698.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 37/59 (62%), Positives = 45/59 (76%)
 Frame = +2

Query: 2   EGDMVFKYQVLPEDLDTLISVKCDEDLQNMLAEYDRQDRKSSNSDGNGSPLLRAFLFPS 178
           +GD+V KYQ+ PEDLD L+SVK DEDL++ML EYDRQ       +G G+P LRAFLFPS
Sbjct: 138 DGDLVLKYQLSPEDLDALVSVKSDEDLRHMLDEYDRQ-------EGEGTPRLRAFLFPS 189


>ref|XP_002526444.1| ATP binding protein, putative [Ricinus communis]
           gi|223534224|gb|EEF35939.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 361

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 38/70 (54%), Positives = 48/70 (68%)
 Frame = +2

Query: 2   EGDMVFKYQVLPEDLDTLISVKCDEDLQNMLAEYDRQDRKSSNSDGNGSPLLRAFLFPSN 181
           EGDMV KYQV+PE+LD L+SV+ DEDL++ML EYDR        +  G+  LRAFLFPS 
Sbjct: 84  EGDMVLKYQVMPEELDVLVSVRTDEDLKHMLDEYDRH-------ESGGTSKLRAFLFPST 136

Query: 182 ANNVDNQFNP 211
              ++NQ  P
Sbjct: 137 PVILENQNGP 146


>ref|XP_002331101.1| predicted protein [Populus trichocarpa] gi|222872829|gb|EEF09960.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 37/60 (61%), Positives = 44/60 (73%)
 Frame = +2

Query: 2   EGDMVFKYQVLPEDLDTLISVKCDEDLQNMLAEYDRQDRKSSNSDGNGSPLLRAFLFPSN 181
           EGDMV KYQV+PE+LD L+SVK DEDL++ML EYDR        +  G+P  RAFLFPSN
Sbjct: 52  EGDMVLKYQVIPEELDVLVSVKSDEDLKHMLDEYDRH-------ESAGTPKFRAFLFPSN 104


>ref|XP_002328781.1| predicted protein [Populus trichocarpa] gi|222839079|gb|EEE77430.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/60 (60%), Positives = 45/60 (75%)
 Frame = +2

Query: 2   EGDMVFKYQVLPEDLDTLISVKCDEDLQNMLAEYDRQDRKSSNSDGNGSPLLRAFLFPSN 181
           EGDMV KYQV+PE+LD L+SV+ +EDL++ML EYDR        +  G+P LRAFLFPSN
Sbjct: 67  EGDMVLKYQVIPEELDVLVSVRTNEDLKHMLDEYDRH-------ESEGTPKLRAFLFPSN 119


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