BLASTX nr result

ID: Coptis25_contig00023331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023331
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638081.1| NPL4-like protein [Medicago truncatula] gi|3...   203   1e-50
ref|XP_002302817.1| predicted protein [Populus trichocarpa] gi|1...   197   1e-48
ref|NP_973714.1| NPL4-like protein 2 [Arabidopsis thaliana] gi|9...   196   2e-48
ref|NP_566118.1| NPL4-like protein 2 [Arabidopsis thaliana] gi|7...   196   2e-48
ref|XP_003521523.1| PREDICTED: NPL4-like protein 1-like [Glycine...   195   4e-48

>ref|XP_003638081.1| NPL4-like protein [Medicago truncatula] gi|355504016|gb|AES85219.1|
           NPL4-like protein [Medicago truncatula]
          Length = 414

 Score =  203 bits (517), Expect = 1e-50
 Identities = 98/127 (77%), Positives = 108/127 (85%)
 Frame = -3

Query: 387 ITHGSIIYLTYEGERNIAGPKIVTPAGSFGKKMTMDDLIAKQMRVTRQETAHCESVSFDR 208
           ++HGSII+L YEGER + GP   +PAGSFGKKMTMDDLIAKQMRV+RQE  HCE VSFDR
Sbjct: 77  LSHGSIIFLAYEGERTVQGPAAFSPAGSFGKKMTMDDLIAKQMRVSRQENPHCELVSFDR 136

Query: 207 DTANVFQSYVNENLAFAVKRGGFMYGTVGEDGRVEVDFIYEMPQQGSEEGLLLFRDENEE 28
           D AN FQ YVNENLAFAVKRGGFMYGTV E+G+VEV+FIYE PQQG E+ LL FRD  EE
Sbjct: 137 DCANAFQHYVNENLAFAVKRGGFMYGTVTEEGKVEVNFIYEPPQQGLEDNLLFFRDPEEE 196

Query: 27  KCVEAIA 7
           KCVEAIA
Sbjct: 197 KCVEAIA 203


>ref|XP_002302817.1| predicted protein [Populus trichocarpa] gi|118484264|gb|ABK94012.1|
           unknown [Populus trichocarpa]
           gi|222844543|gb|EEE82090.1| predicted protein [Populus
           trichocarpa]
          Length = 411

 Score =  197 bits (500), Expect = 1e-48
 Identities = 97/126 (76%), Positives = 109/126 (86%)
 Frame = -3

Query: 387 ITHGSIIYLTYEGERNIAGPKIVTPAGSFGKKMTMDDLIAKQMRVTRQETAHCESVSFDR 208
           I+HGS+I+L Y+GER IAGP  V PAGSFG+KMT+DDLIAKQMRVTRQE  HC+SVSFDR
Sbjct: 77  ISHGSLIFLAYDGERTIAGPA-VRPAGSFGRKMTIDDLIAKQMRVTRQENPHCDSVSFDR 135

Query: 207 DTANVFQSYVNENLAFAVKRGGFMYGTVGEDGRVEVDFIYEMPQQGSEEGLLLFRDENEE 28
           D AN FQ YVNE LAFAVKRGGFMYGTV E+G+VEVDFIYE PQQG+EE L+L RD +EE
Sbjct: 136 DCANAFQHYVNETLAFAVKRGGFMYGTVSEEGKVEVDFIYEPPQQGTEEVLMLLRDSDEE 195

Query: 27  KCVEAI 10
           K VEAI
Sbjct: 196 KLVEAI 201


>ref|NP_973714.1| NPL4-like protein 2 [Arabidopsis thaliana]
           gi|94442443|gb|ABF19009.1| At2g47970 [Arabidopsis
           thaliana] gi|330255824|gb|AEC10918.1| NPL4-like protein
           2 [Arabidopsis thaliana]
          Length = 354

 Score =  196 bits (497), Expect = 2e-48
 Identities = 94/125 (75%), Positives = 110/125 (88%)
 Frame = -3

Query: 381 HGSIIYLTYEGERNIAGPKIVTPAGSFGKKMTMDDLIAKQMRVTRQETAHCESVSFDRDT 202
           HGS++YL Y+GER+I G   VTPAGSFG+KMT+DDLIA+QMRVTRQET+HC+SVSFDRD 
Sbjct: 79  HGSMLYLAYDGERSIPGAPPVTPAGSFGRKMTVDDLIARQMRVTRQETSHCDSVSFDRDA 138

Query: 201 ANVFQSYVNENLAFAVKRGGFMYGTVGEDGRVEVDFIYEMPQQGSEEGLLLFRDENEEKC 22
           AN FQ YVNE+LAFAVKRGGFMYGTV E+G+VEVDFIYE PQQG+E  L+L RD +EEK 
Sbjct: 139 ANAFQHYVNESLAFAVKRGGFMYGTVTEEGQVEVDFIYEPPQQGTEANLILMRDADEEKR 198

Query: 21  VEAIA 7
           V+AIA
Sbjct: 199 VDAIA 203


>ref|NP_566118.1| NPL4-like protein 2 [Arabidopsis thaliana]
           gi|75100586|sp|O82264.1|NPL42_ARATH RecName:
           Full=NPL4-like protein 2 gi|3738309|gb|AAC63651.1|
           expressed protein [Arabidopsis thaliana]
           gi|20197558|gb|AAM15128.1| expressed protein
           [Arabidopsis thaliana] gi|110735120|gb|ABG89130.1| NPL4b
           [synthetic construct] gi|330255825|gb|AEC10919.1|
           NPL4-like protein 2 [Arabidopsis thaliana]
          Length = 413

 Score =  196 bits (497), Expect = 2e-48
 Identities = 94/125 (75%), Positives = 110/125 (88%)
 Frame = -3

Query: 381 HGSIIYLTYEGERNIAGPKIVTPAGSFGKKMTMDDLIAKQMRVTRQETAHCESVSFDRDT 202
           HGS++YL Y+GER+I G   VTPAGSFG+KMT+DDLIA+QMRVTRQET+HC+SVSFDRD 
Sbjct: 79  HGSMLYLAYDGERSIPGAPPVTPAGSFGRKMTVDDLIARQMRVTRQETSHCDSVSFDRDA 138

Query: 201 ANVFQSYVNENLAFAVKRGGFMYGTVGEDGRVEVDFIYEMPQQGSEEGLLLFRDENEEKC 22
           AN FQ YVNE+LAFAVKRGGFMYGTV E+G+VEVDFIYE PQQG+E  L+L RD +EEK 
Sbjct: 139 ANAFQHYVNESLAFAVKRGGFMYGTVTEEGQVEVDFIYEPPQQGTEANLILMRDADEEKR 198

Query: 21  VEAIA 7
           V+AIA
Sbjct: 199 VDAIA 203


>ref|XP_003521523.1| PREDICTED: NPL4-like protein 1-like [Glycine max]
          Length = 413

 Score =  195 bits (495), Expect = 4e-48
 Identities = 95/125 (76%), Positives = 105/125 (84%)
 Frame = -3

Query: 381 HGSIIYLTYEGERNIAGPKIVTPAGSFGKKMTMDDLIAKQMRVTRQETAHCESVSFDRDT 202
           HGS+++L YEGER +AGP    PAGSFG+KMTMDDLIAKQMRVTRQE  HCE VSFDRD 
Sbjct: 79  HGSMVFLAYEGERRVAGPAF-NPAGSFGRKMTMDDLIAKQMRVTRQENPHCELVSFDRDC 137

Query: 201 ANVFQSYVNENLAFAVKRGGFMYGTVGEDGRVEVDFIYEMPQQGSEEGLLLFRDENEEKC 22
           AN FQ YVN+ LAFAVKRGGFMYGTV E+G+VEVDFIYE PQQGSE+ L+ FRD  EEK 
Sbjct: 138 ANAFQHYVNDTLAFAVKRGGFMYGTVSEEGKVEVDFIYEPPQQGSEDNLVFFRDTEEEKF 197

Query: 21  VEAIA 7
           VEAIA
Sbjct: 198 VEAIA 202


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