BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023326
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66875.1| hypothetical protein VITISV_009275 [Vitis vinifera]    96   3e-18
dbj|BAD66815.1| orf174 [Beta vulgaris subsp. vulgaris]                 90   2e-16
ref|NP_063976.1| orf114a gene product (mitochondrion) [Beta vulg...    74   2e-11

>emb|CAN66875.1| hypothetical protein VITISV_009275 [Vitis vinifera]
          Length = 142

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 53/78 (67%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
 Frame = -1

Query: 427 GLT--GSLTNTKIIEKNCLFNILSLVMLLPLALRNRANHLDIPSTQHRTSKGSQMTHQST 254
           GLT  GSLTNT IIEKNCLF ILS V LLP ALRNR++H+DIPSTQHR+SKGS+   + T
Sbjct: 39  GLTEPGSLTNTNIIEKNCLFCILSPVPLLPRALRNRSDHIDIPSTQHRSSKGSR---RPT 95

Query: 253 TAQKLGSFRKQIPLSSFH 200
            A+K GSFRK IP+   H
Sbjct: 96  KARKSGSFRKWIPIRRVH 113


>dbj|BAD66815.1| orf174 [Beta vulgaris subsp. vulgaris]
          Length = 174

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 50/85 (58%), Positives = 60/85 (70%)
 Frame = -1

Query: 454 TFPGSVATAGLTGSLTNTKIIEKNCLFNILSLVMLLPLALRNRANHLDIPSTQHRTSKGS 275
           T PGS+    L   + NT IIEKNCLF ILS V+LLP ALRNR+ H+DIPSTQHR+SKGS
Sbjct: 66  TEPGSLTNTNL---IENTNIIEKNCLFCILSPVLLLPRALRNRSEHIDIPSTQHRSSKGS 122

Query: 274 QMTHQSTTAQKLGSFRKQIPLSSFH 200
           +   + T A+K GS RK IP+   H
Sbjct: 123 R---RPTKARKPGSVRKWIPIRRVH 144


>ref|NP_063976.1| orf114a gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|323435087|ref|YP_004222305.1| hypothetical
           protein BevumaM_p070 [Beta vulgaris subsp. maritima]
           gi|346683178|ref|YP_004842110.1| hypothetical protein
           BemaM_p065 [Beta macrocarpa] gi|9049278|dbj|BAA99288.1|
           orf114a [Beta vulgaris subsp. vulgaris]
           gi|317905640|emb|CBJ14041.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439820|emb|CBJ17532.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|345500096|emb|CBX24914.1| hypothetical protein [Beta
           macrocarpa] gi|384977899|emb|CBL54123.1| hypothetical
           protein (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 114

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 46/80 (57%), Positives = 52/80 (65%)
 Frame = +3

Query: 216 GICFLKDPSFCAVVLWWVI*DPFDVLCCVEGISK*FARLRKASGSNITRESILKRQFFSI 395
           GI FL DP F A+V    + DPFD LCCVEGIS    RLRKA GS  T ESI KRQFFSI
Sbjct: 9   GIHFLTDPGFRALV---GLRDPFDDLCCVEGISICSDRLRKARGSKRTGESIQKRQFFSI 65

Query: 396 ILVLVSDPVRPAVATEPGKV 455
           ILV     +R  + ++PG V
Sbjct: 66  ILVF---SIRLVLVSDPGSV 82