BLASTX nr result

ID: Coptis25_contig00023316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023316
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277369.1| PREDICTED: uncharacterized protein LOC100258...    74   3e-11
emb|CBI40421.3| unnamed protein product [Vitis vinifera]               74   3e-11
ref|XP_002302602.1| predicted protein [Populus trichocarpa] gi|2...    72   1e-10
ref|XP_003548624.1| PREDICTED: uncharacterized protein LOC100801...    65   1e-08
gb|AFK39236.1| unknown [Medicago truncatula]                           58   2e-06

>ref|XP_002277369.1| PREDICTED: uncharacterized protein LOC100258452 [Vitis vinifera]
          Length = 256

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 41/78 (52%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
 Frame = -1

Query: 497 HAKTNEDSESVKNVMITLAWYSYELLGIAASFFRSPASNVEA*DRVLEQGGDRSYVVDRA 318
           ++ T ++SE  +N ++ +AWY  ELLGIAASFFRSP S+VEA +R ++  GD S  VDRA
Sbjct: 60  NSSTAQESEP-ENALLKVAWYGSELLGIAASFFRSP-SSVEAPERAIDLAGDGSGAVDRA 117

Query: 317 QVMEN-SEDFERSYFFPG 267
            ++E   EDF+RSYF  G
Sbjct: 118 ALVETIKEDFQRSYFVTG 135


>emb|CBI40421.3| unnamed protein product [Vitis vinifera]
          Length = 240

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 41/78 (52%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
 Frame = -1

Query: 497 HAKTNEDSESVKNVMITLAWYSYELLGIAASFFRSPASNVEA*DRVLEQGGDRSYVVDRA 318
           ++ T ++SE  +N ++ +AWY  ELLGIAASFFRSP S+VEA +R ++  GD S  VDRA
Sbjct: 44  NSSTAQESEP-ENALLKVAWYGSELLGIAASFFRSP-SSVEAPERAIDLAGDGSGAVDRA 101

Query: 317 QVMEN-SEDFERSYFFPG 267
            ++E   EDF+RSYF  G
Sbjct: 102 ALVETIKEDFQRSYFVTG 119


>ref|XP_002302602.1| predicted protein [Populus trichocarpa] gi|222844328|gb|EEE81875.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 38/79 (48%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
 Frame = -1

Query: 497 HAKTNEDSESVKNVMITLAWYSYELLGIAASFFRSPA-SNVEA*DRVLEQGGDRSYVVDR 321
           ++ +++     +N ++ +AWYS ELLGIAASFFRSP+ S+ EA ++ ++ G D S V+DR
Sbjct: 45  NSSSSKQESEPENALLKVAWYSSELLGIAASFFRSPSNSSTEASEKDIKLGKDVSGVIDR 104

Query: 320 AQVMEN-SEDFERSYFFPG 267
           A VME   EDF++SYF  G
Sbjct: 105 AVVMETIKEDFQKSYFVTG 123


>ref|XP_003548624.1| PREDICTED: uncharacterized protein LOC100801965 [Glycine max]
          Length = 238

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 40/73 (54%), Positives = 48/73 (65%)
 Frame = -1

Query: 485 NEDSESVKNVMITLAWYSYELLGIAASFFRSPASNVEA*DRVLEQGGDRSYVVDRAQVME 306
           N++SES  N ++ LAWYS ELLGIAAS FRSP SN E   + L Q  DR+ VVD  +   
Sbjct: 41  NKESESQNNAILKLAWYSSELLGIAASVFRSP-SNEEVPPQRLLQTIDRAAVVDTIK--- 96

Query: 305 NSEDFERSYFFPG 267
             +DFERSYF  G
Sbjct: 97  --QDFERSYFVTG 107


>gb|AFK39236.1| unknown [Medicago truncatula]
          Length = 230

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
 Frame = -1

Query: 485 NEDSESVKNVMITLAWYSYELLGIAASFFRSPASNVEA--*DRVLEQGGDRSYVVDRAQV 312
           N++S+   N  + +AWYS ELLGIAAS FRSP+   EA    R+L+        +DRA V
Sbjct: 47  NQESQPQTNAFLKVAWYSSELLGIAASAFRSPSDEEEASPPQRLLQ-------TIDRASV 99

Query: 311 MEN-SEDFERSYFFPG 267
           ++   +DF+RSYF  G
Sbjct: 100 VDTIKQDFQRSYFVTG 115


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