BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023315
         (1196 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525469.1| pentatricopeptide repeat-containing protein,...   348   2e-93
ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containi...   340   3e-91
ref|XP_002319139.1| predicted protein [Populus trichocarpa] gi|2...   340   5e-91
ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containi...   334   3e-89
ref|XP_003624580.1| Pentatricopeptide repeat-containing protein ...   332   1e-88

>ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535282|gb|EEF36959.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 581

 Score =  348 bits (892), Expect = 2e-93
 Identities = 165/238 (69%), Positives = 198/238 (83%)
 Frame = -2

Query: 715 LGIKDEKLIQNVEIIVGILSEFESSATEAKGKLEKCGIPSSRELVLEVLSRVRNDWTAAF 536
           L +KDE L+Q+V II+ IL +   +  E K K+E CG+  SRELVLEVLSR+RNDW AAF
Sbjct: 86  LNLKDEGLVQDVTIIMSILHQLSGNPVEMKNKIEHCGVKVSRELVLEVLSRIRNDWEAAF 145

Query: 535 TFFLWAGKQEGYSHSVREYHSMISILGKMRKFDTAWNLINEMRGGKVGPSLVSPQTLLIM 356
           TFFLWAG+Q GYSHSVREYH+MISILGKMRKFDTAW LI+EMRG K G SLV+PQTLLIM
Sbjct: 146 TFFLWAGRQLGYSHSVREYHAMISILGKMRKFDTAWALIDEMRGVKTGISLVTPQTLLIM 205

Query: 355 IRKYCAVHDVGKAINTFYAHKQFNFEIGIEEFQDLLSALCRYKNVEAAEHFLFCNEKAYP 176
           IRKYCAVHDVG+AINTFYAHK+F F++GI+EFQ LLSALCRYKNV+ AEH +FCN+  +P
Sbjct: 206 IRKYCAVHDVGRAINTFYAHKRFKFDLGIDEFQSLLSALCRYKNVQDAEHLMFCNKDVFP 265

Query: 175 LNTKSFNIILNGWCNMLVNLGQAKRFWRLMGKKGIVRDTVSFSSMISCYSKASNLHEV 2
            NTKSFNI+LNGWCN++ +  +A R WR M K+ I  D VS++S+ISCYSKA NL++V
Sbjct: 266 FNTKSFNIVLNGWCNVIGSPREADRIWREMCKRRIHYDVVSYASIISCYSKAGNLYKV 323


>ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Glycine max]
          Length = 516

 Score =  340 bits (873), Expect = 3e-91
 Identities = 159/238 (66%), Positives = 194/238 (81%)
 Frame = -2

Query: 715 LGIKDEKLIQNVEIIVGILSEFESSATEAKGKLEKCGIPSSRELVLEVLSRVRNDWTAAF 536
           L  +D++L Q+V+ I+ I+ E  S  ++ K KLE C +  S +LV+EVL R RNDW AAF
Sbjct: 21  LRFRDDRLSQDVKTILDIMHEMGSGPSQTKQKLEHCSVDLSAKLVVEVLLRTRNDWEAAF 80

Query: 535 TFFLWAGKQEGYSHSVREYHSMISILGKMRKFDTAWNLINEMRGGKVGPSLVSPQTLLIM 356
           TFFLWAGKQ GY+HS+REYHSMISILGKMRKFDTAWNLI EMR G+ GPSLV+PQTLLIM
Sbjct: 81  TFFLWAGKQPGYAHSIREYHSMISILGKMRKFDTAWNLIEEMRRGRTGPSLVTPQTLLIM 140

Query: 355 IRKYCAVHDVGKAINTFYAHKQFNFEIGIEEFQDLLSALCRYKNVEAAEHFLFCNEKAYP 176
           IRKYCAVHDV +AINTFYA+KQFNF++G+EEF  LLSALCRYKNV+ AEH LFCN+  +P
Sbjct: 141 IRKYCAVHDVARAINTFYAYKQFNFQVGLEEFHSLLSALCRYKNVQDAEHLLFCNKNLFP 200

Query: 175 LNTKSFNIILNGWCNMLVNLGQAKRFWRLMGKKGIVRDTVSFSSMISCYSKASNLHEV 2
           L+TKSFNIILNGWCN++V+   A+R W  M K+ I  D VS+ S+ISCYSK+S L++V
Sbjct: 201 LDTKSFNIILNGWCNLIVSTSHAERIWHEMSKRRIQHDVVSYGSIISCYSKSSKLYKV 258


>ref|XP_002319139.1| predicted protein [Populus trichocarpa] gi|222857515|gb|EEE95062.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  340 bits (871), Expect = 5e-91
 Identities = 162/241 (67%), Positives = 198/241 (82%)
 Frame = -2

Query: 724 LEGLGIKDEKLIQNVEIIVGILSEFESSATEAKGKLEKCGIPSSRELVLEVLSRVRNDWT 545
           + GL + D+ L Q+ + IV IL E   +  E K K+E+CGI  S+ELVLEVLSRVRNDW 
Sbjct: 11  VRGLNLSDDGLFQDAKTIVNILQESCDNRVEMKSKIEQCGIKVSQELVLEVLSRVRNDWE 70

Query: 544 AAFTFFLWAGKQEGYSHSVREYHSMISILGKMRKFDTAWNLINEMRGGKVGPSLVSPQTL 365
           AAFTFFLWA +Q GY+HSVREYHSMISILGKMRKFDTAW LI+EMRG K G SLV+PQTL
Sbjct: 71  AAFTFFLWAARQPGYAHSVREYHSMISILGKMRKFDTAWVLIDEMRGVKTGVSLVTPQTL 130

Query: 364 LIMIRKYCAVHDVGKAINTFYAHKQFNFEIGIEEFQDLLSALCRYKNVEAAEHFLFCNEK 185
           LIMIRKYCAVHDVG+AINTFYA+K+F F++GIEEFQ LLSALCRYKNV+ AE  ++CN+ 
Sbjct: 131 LIMIRKYCAVHDVGRAINTFYAYKRFKFDMGIEEFQSLLSALCRYKNVQDAEQLMYCNKA 190

Query: 184 AYPLNTKSFNIILNGWCNMLVNLGQAKRFWRLMGKKGIVRDTVSFSSMISCYSKASNLHE 5
            +PLNTKSFNI+LNGWCN++ +  +++R WR M K+GI  D VS++SM+SCYSKA +L+ 
Sbjct: 191 VFPLNTKSFNIVLNGWCNLIGSPRESERVWREMSKRGIRFDVVSYASMMSCYSKAGSLYR 250

Query: 4   V 2
           V
Sbjct: 251 V 251


>ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Glycine max]
          Length = 612

 Score =  334 bits (856), Expect = 3e-89
 Identities = 160/238 (67%), Positives = 194/238 (81%)
 Frame = -2

Query: 715 LGIKDEKLIQNVEIIVGILSEFESSATEAKGKLEKCGIPSSRELVLEVLSRVRNDWTAAF 536
           L ++D+ L ++V+ I+ I+ E  S  ++ K KLE C I  S ELV+EVLSR RNDW AAF
Sbjct: 117 LHLRDDGLAKDVKTILAIMHEVGSGPSQIKQKLEHCSIVLSPELVVEVLSRTRNDWEAAF 176

Query: 535 TFFLWAGKQEGYSHSVREYHSMISILGKMRKFDTAWNLINEMRGGKVGPSLVSPQTLLIM 356
           TFFLWAGKQ GY+HSVREYHSMISILGKMRKFDTAWNLI EMRGG+ G SLV+PQTLLIM
Sbjct: 177 TFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEEMRGGRNGLSLVTPQTLLIM 236

Query: 355 IRKYCAVHDVGKAINTFYAHKQFNFEIGIEEFQDLLSALCRYKNVEAAEHFLFCNEKAYP 176
           IRKYCAVHDV +AINTFYA+K+FNF +G+EEF  LLSALCRYKNV+ AE+ LFCN+  +P
Sbjct: 237 IRKYCAVHDVARAINTFYAYKRFNFRVGLEEFHSLLSALCRYKNVQDAEYLLFCNKDVFP 296

Query: 175 LNTKSFNIILNGWCNMLVNLGQAKRFWRLMGKKGIVRDTVSFSSMISCYSKASNLHEV 2
           L+TKSFNIILNGWCN++V+   A+R W  M K+ I  D VS+ S+ISCYSK+S L++V
Sbjct: 297 LDTKSFNIILNGWCNLIVSTSHAERIWHEMIKRRIQHDVVSYGSIISCYSKSSKLYKV 354


>ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499595|gb|AES80798.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  332 bits (851), Expect = 1e-88
 Identities = 156/238 (65%), Positives = 193/238 (81%)
 Frame = -2

Query: 715 LGIKDEKLIQNVEIIVGILSEFESSATEAKGKLEKCGIPSSRELVLEVLSRVRNDWTAAF 536
           L ++D+  +++V+ I+ I+ +  S   E K KLE C + +S ELV+EVLSRVRNDW AAF
Sbjct: 90  LHLRDDGFVKDVKTILDIIHKPGSGPYEIKQKLEDCNVKASSELVVEVLSRVRNDWEAAF 149

Query: 535 TFFLWAGKQEGYSHSVREYHSMISILGKMRKFDTAWNLINEMRGGKVGPSLVSPQTLLIM 356
           TFFLWAGKQ GY HSVREYHSMIS+LGKMR+FDTAW L+ EMR GK G S+V+PQTLLIM
Sbjct: 150 TFFLWAGKQPGYDHSVREYHSMISVLGKMRRFDTAWALVEEMRRGKTGESIVTPQTLLIM 209

Query: 355 IRKYCAVHDVGKAINTFYAHKQFNFEIGIEEFQDLLSALCRYKNVEAAEHFLFCNEKAYP 176
           IRKYCAVHDVG+AINTFYA K+FNF++G+ EFQ LLSALCRYKNV+ AEH LFCN+  +P
Sbjct: 210 IRKYCAVHDVGRAINTFYAFKRFNFQVGLYEFQGLLSALCRYKNVQDAEHLLFCNKNVFP 269

Query: 175 LNTKSFNIILNGWCNMLVNLGQAKRFWRLMGKKGIVRDTVSFSSMISCYSKASNLHEV 2
           L+TKSFNIILNGWCN++V+   A+R W  M K+ I  D VS++S+ISCYSK+S L+ V
Sbjct: 270 LDTKSFNIILNGWCNLIVSARNAERIWEEMSKRRIQHDVVSYASIISCYSKSSKLYRV 327