BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023311
         (890 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g...   266   4e-69
ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   266   6e-69
ref|XP_002305539.1| f-box family protein [Populus trichocarpa] g...   261   2e-67
ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumi...   244   3e-62
ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumi...   244   3e-62

>ref|XP_002313690.1| f-box family protein [Populus trichocarpa]
           gi|222850098|gb|EEE87645.1| f-box family protein
           [Populus trichocarpa]
          Length = 410

 Score =  266 bits (681), Expect = 4e-69
 Identities = 144/299 (48%), Positives = 200/299 (66%), Gaps = 7/299 (2%)
 Frame = -2

Query: 883 HLLNPLSESKIQPLPETFPKHFDILNLRVFELCQEYVLRYADKWPLSF----AGDVYREK 716
           HL +PLS  +   L  + P+  D++NLR+ EL  EYVL +    P S     AG++Y EK
Sbjct: 103 HLFDPLSRCRSTSLHHSLPRVLDLMNLRIRELGHEYVLHHVSYKPNSSSFTDAGNLYMEK 162

Query: 715 VIFSPTPPWSN-EMDYVIMTIHVSGKLALFRLKDNVWSIIDEMPNPYEDVIHFKGRFYAV 539
           V+      W N E ++V++TIHVSGKLA+F+  D  W+II+EMP+P++DVI +KGRFYAV
Sbjct: 163 VVMI----WLNCETEFVLLTIHVSGKLAMFKSGDKRWTIINEMPSPFDDVIVYKGRFYAV 218

Query: 538 DGTGRAVVVAPDLTIGEVAGPVFGGDKKYLVEMDGELLLVDRYLKNGNDD-LNFWNDNEI 362
           D TGR VVVA D  +G V  PVFGGDKKYLVE  G+LLLVD YL    D+ L+  ND   
Sbjct: 219 DNTGRTVVVALDTDLGLVGDPVFGGDKKYLVESKGDLLLVDMYLSIDTDEGLSIGND--- 275

Query: 361 YVPNDDTYVMDTTLLFIVYRLDKWEKTWVELKSLGDRLLFLSDNCSFCAPASDLYGSKGN 182
            V +   Y+ + T+ F V++L++  K+W+E+K+L DR+LFL D+ +F A AS+L G KGN
Sbjct: 276 VVQDLVQYMSERTVRFKVFKLNEEGKSWIEVKNLEDRVLFLGDDSTFSASASELSGCKGN 335

Query: 181 CIYFTDRYFQSFKV-EETAFNRHSIGVFSLENGSIAPLASYAGYSQLFWPPPMWITATT 8
           CI+F D +F S +  ++ +     IGVF LE+G I PL ++  YS++FWPPP WI +T+
Sbjct: 336 CIFFEDNFFYSREEGDDGSMIGRDIGVFELESGCIGPLRNFPDYSKMFWPPPDWIASTS 394


>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
           vinifera]
          Length = 387

 Score =  266 bits (679), Expect = 6e-69
 Identities = 148/297 (49%), Positives = 189/297 (63%), Gaps = 6/297 (2%)
 Frame = -2

Query: 880 LLNPLSESKIQPLPETFPKHFDILNLRVFELCQEYVLRYADKWPL--SFAGDVYREKVIF 707
           L+NPL+  K + LP  FPK FD   LRVFEL QEYVL Y D  P   ++ G +Y EKV F
Sbjct: 103 LINPLTTFKFRHLPPDFPKTFDFSGLRVFELGQEYVLEYMDYRPPGNAYLGSLYMEKVAF 162

Query: 706 SPTPPWSNEMDYVIMTIHVSGKLALFRLKDNVWSIIDEMPNPYEDVIHFKGRFYAVDGTG 527
                  N  D+ ++TIH+SGKLA+FR  D  W IID+M +PY+DVI F G+FYAVD TG
Sbjct: 163 CS----GNGDDFWLLTIHLSGKLAMFRSGDKKWMIIDDMQSPYDDVIFFDGKFYAVDNTG 218

Query: 526 RAVVV----APDLTIGEVAGPVFGGDKKYLVEMDGELLLVDRYLKNGNDDLNFWNDNEIY 359
           R VVV         +   A  VFGGDKK LVE +GELLLVD Y    +DD     D  + 
Sbjct: 219 RTVVVDVADGSSPVVNLAASSVFGGDKKVLVESEGELLLVDTYFTMYHDD-----DEHV- 272

Query: 358 VPNDDTYVMDTTLLFIVYRLDKWEKTWVELKSLGDRLLFLSDNCSFCAPASDLYGSKGNC 179
                 ++++  + F V+RLD+ E+ WVE++SLGDRLLFL D+ SF A ASD YG KGN 
Sbjct: 273 -----RWMIERMIHFKVFRLDQREQKWVEIESLGDRLLFLGDDSSFSARASDFYGCKGNS 327

Query: 178 IYFTDRYFQSFKVEETAFNRHSIGVFSLENGSIAPLASYAGYSQLFWPPPMWITATT 8
           I FT+  F S   E+ A    +IGVF L++GSI PL+SYA YS+  WPPP W+++T+
Sbjct: 328 ICFTNISFFSDAEEDDASRSGTIGVFDLDSGSIGPLSSYANYSKTIWPPPAWVSSTS 384


>ref|XP_002305539.1| f-box family protein [Populus trichocarpa]
           gi|222848503|gb|EEE86050.1| f-box family protein
           [Populus trichocarpa]
          Length = 469

 Score =  261 bits (666), Expect = 2e-67
 Identities = 140/299 (46%), Positives = 198/299 (66%), Gaps = 7/299 (2%)
 Frame = -2

Query: 883 HLLNPLSESKIQPLPETFPKHFDILNLRVFELCQEYVLRYADKWPLSF----AGDVYREK 716
           HL +PLS  +   LP   P+  D++NLR+ EL  EYVL + +  P S     AG++Y EK
Sbjct: 103 HLFDPLSRCRSTSLPNNLPRVLDLMNLRIRELGHEYVLHHLNYKPNSSSFTDAGNLYMEK 162

Query: 715 VIFSPTPPWSNEM-DYVIMTIHVSGKLALFRLKDNVWSIIDEMPNPYEDVIHFKGRFYAV 539
           V+      W N + ++V++TIHVSGKLA+F+  D  W+II+EMP+P++DVI +KGRFYAV
Sbjct: 163 VVMI----WLNSLTEFVLLTIHVSGKLAIFKSGDKRWTIINEMPSPFDDVIVYKGRFYAV 218

Query: 538 DGTGRAVVVAPDLTIGEVAGPVFGGDKKYLVEMDGELLLVDRYLKNGNDD-LNFWNDNEI 362
           D TGR VVVA D  +G V  PVFGGDKKYLVE  G+LLLVD YL   +D+ L+  +D   
Sbjct: 219 DNTGRTVVVAMDTNLGLVGNPVFGGDKKYLVESKGDLLLVDMYLSIDSDEGLSIGHD--- 275

Query: 361 YVPNDDTYVMDTTLLFIVYRLDKWEKTWVELKSLGDRLLFLSDNCSFCAPASDLYGSKGN 182
            V +   Y+ + T+ F V++L++  K W+E+  L DR+LFL D+ +F A AS+L G KGN
Sbjct: 276 VVQDLVQYMSERTVWFKVFKLNEEGKCWIEVNDLEDRVLFLGDDLTFSASASELSGCKGN 335

Query: 181 CIYFTDRYFQS-FKVEETAFNRHSIGVFSLENGSIAPLASYAGYSQLFWPPPMWITATT 8
           CI+F D +F S  + ++ +     IGVF LE+G I PL ++   S++FWPPP W+ +T+
Sbjct: 336 CIFFNDDFFYSRGEGDDGSLFGRDIGVFELESGCIGPLRNFPDNSKMFWPPPDWVASTS 394


>ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
          Length = 458

 Score =  244 bits (622), Expect = 3e-62
 Identities = 134/294 (45%), Positives = 184/294 (62%), Gaps = 5/294 (1%)
 Frame = -2

Query: 874 NPLSESKIQPLPETFPKHFDILNLRVFELCQEYVLRYADKWPLSF----AGDVYREKVIF 707
           NPLS+S  +PLP+ FPK  ++LN  V ELCQEYVL Y + WP+      AGD+YREK+ +
Sbjct: 101 NPLSKSYFKPLPKNFPKVLNLLNFPVLELCQEYVLHYLNFWPVRHRPGDAGDLYREKIAY 160

Query: 706 SPTPPWSNEMDYVIMTIHVSGKLALFRLKDNVWSIIDEMPNPYEDVIHFKGRFYAVDGTG 527
                  ++  +V++TIHVSGKLA+F+ +D  WS I     PY+DVI F G FYAVD +G
Sbjct: 161 KCLNYDGSQ--FVLVTIHVSGKLAMFKSEDGQWSTIHHTALPYDDVILFNGEFYAVDNSG 218

Query: 526 RAVVVAPDLTIGEVAGPVFGGDKKYLVEMDGELLLVDRYLKNGNDDLNFWNDNEIYVPND 347
              +V     +  +A PVFGGDKK L+E +GELLLVD YL   +++  F  D E   P +
Sbjct: 219 ATFLVESQHKVTLIAEPVFGGDKKILMECNGELLLVDMYLTVDSEE-GFGLDGE---PTE 274

Query: 346 DTYVMDTTLLFIVYRLDK-WEKTWVELKSLGDRLLFLSDNCSFCAPASDLYGSKGNCIYF 170
              + + T+ F V++L +   K W  +  LG+ +LFL +NCSF A AS + G KGNCI+F
Sbjct: 275 GV-LHEKTVGFKVFKLHRNGSKKWTVVCDLGNTMLFLGENCSFSASASGVSGCKGNCIFF 333

Query: 169 TDRYFQSFKVEETAFNRHSIGVFSLENGSIAPLASYAGYSQLFWPPPMWITATT 8
           TD +      E+  F    I +F LE G+I+PL+    YS+LFWPPP WIT+T+
Sbjct: 334 TDGFLCPNVDEDDVFKGSDIAIFDLEFGTISPLSDSPMYSRLFWPPPSWITSTS 387


>ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
          Length = 404

 Score =  244 bits (622), Expect = 3e-62
 Identities = 134/294 (45%), Positives = 184/294 (62%), Gaps = 5/294 (1%)
 Frame = -2

Query: 874 NPLSESKIQPLPETFPKHFDILNLRVFELCQEYVLRYADKWPLSF----AGDVYREKVIF 707
           NPLS+S  +PLP+ FPK  ++LN  V ELCQEYVL Y + WP+      AGD+YREK+ +
Sbjct: 101 NPLSKSYFKPLPKNFPKVLNLLNFPVLELCQEYVLHYLNFWPVRHRPGDAGDLYREKIAY 160

Query: 706 SPTPPWSNEMDYVIMTIHVSGKLALFRLKDNVWSIIDEMPNPYEDVIHFKGRFYAVDGTG 527
                  ++  +V++TIHVSGKLA+F+ +D  WS I     PY+DVI F G FYAVD +G
Sbjct: 161 KCLNYDGSQ--FVLVTIHVSGKLAMFKSEDGQWSTIHHTALPYDDVILFNGEFYAVDNSG 218

Query: 526 RAVVVAPDLTIGEVAGPVFGGDKKYLVEMDGELLLVDRYLKNGNDDLNFWNDNEIYVPND 347
              +V     +  +A PVFGGDKK L+E +GELLLVD YL   +++  F  D E   P +
Sbjct: 219 ATFLVESQHKVTLIAEPVFGGDKKILMECNGELLLVDMYLTVDSEE-GFGLDGE---PTE 274

Query: 346 DTYVMDTTLLFIVYRLDK-WEKTWVELKSLGDRLLFLSDNCSFCAPASDLYGSKGNCIYF 170
              + + T+ F V++L +   K W  +  LG+ +LFL +NCSF A AS + G KGNCI+F
Sbjct: 275 GV-LHEKTVGFKVFKLHRNGSKKWTVVCDLGNTMLFLGENCSFSASASGVSGCKGNCIFF 333

Query: 169 TDRYFQSFKVEETAFNRHSIGVFSLENGSIAPLASYAGYSQLFWPPPMWITATT 8
           TD +      E+  F    I +F LE G+I+PL+    YS+LFWPPP WIT+T+
Sbjct: 334 TDGFLCPNVDEDDVFKGSDIAIFDLEFGTISPLSDSPMYSRLFWPPPSWITSTS 387