BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023305
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]   135   4e-30
ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containi...   133   1e-29
ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   116   2e-24
emb|CBI36964.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containi...   111   7e-23

>emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
          Length = 494

 Score =  135 bits (339), Expect = 4e-30
 Identities = 65/131 (49%), Positives = 90/131 (68%), Gaps = 2/131 (1%)
 Frame = -1

Query: 391 SRLGDTDGLEKYFEEWESSYTLYDIRLTNILIDSYLERDMIEEAEKLREGAVKKGAEPNV 212
           S+LGD  GLEK F+EWES  + YD+RL+N++++SYL R+MIEEA  L E   K+G E  +
Sbjct: 315 SKLGDVAGLEKCFKEWESGCSTYDVRLSNVMLESYLNREMIEEANLLSESIAKRGPELKL 374

Query: 211 GTLMKFMRFYLHKHQMKLAGKYFEEATLKV--KVNHWKASQETVSLFLNYFEEEKDADGA 38
            TL  FM+FYL KHQ+ LA KY +    K   + N W  ++ET+++FL YFEE KD D A
Sbjct: 375 KTLDLFMKFYLKKHQLDLAMKYLDMGASKADPENNKWFPTEETITMFLEYFEEVKDVDSA 434

Query: 37  EYFCKLLKNIN 5
           E FC+ ++ I+
Sbjct: 435 EKFCETMRKIS 445


>ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
           mitochondrial [Vitis vinifera]
           gi|296089781|emb|CBI39600.3| unnamed protein product
           [Vitis vinifera]
          Length = 498

 Score =  133 bits (335), Expect = 1e-29
 Identities = 64/131 (48%), Positives = 90/131 (68%), Gaps = 2/131 (1%)
 Frame = -1

Query: 391 SRLGDTDGLEKYFEEWESSYTLYDIRLTNILIDSYLERDMIEEAEKLREGAVKKGAEPNV 212
           S+LGD  GLEK F+EWES  + YD+RL+N++++SYL R++IEEA  L E   K+G E  +
Sbjct: 319 SKLGDVAGLEKCFKEWESGCSTYDVRLSNVMLESYLNREIIEEANLLSESIAKRGPELKL 378

Query: 211 GTLMKFMRFYLHKHQMKLAGKYFEEATLKV--KVNHWKASQETVSLFLNYFEEEKDADGA 38
            TL  FM+FYL KHQ+ LA KY +    K   + N W  ++ET+++FL YFEE KD D A
Sbjct: 379 KTLDLFMKFYLKKHQLDLAMKYLDMGASKADPENNKWFPTEETITMFLEYFEEVKDVDSA 438

Query: 37  EYFCKLLKNIN 5
           E FC+ ++ I+
Sbjct: 439 EKFCETMRKIS 449


>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02370, mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  116 bits (290), Expect = 2e-24
 Identities = 59/129 (45%), Positives = 82/129 (63%)
 Frame = -1

Query: 391 SRLGDTDGLEKYFEEWESSYTLYDIRLTNILIDSYLERDMIEEAEKLREGAVKKGAEPNV 212
           + L D DGL+  FEEW+SS   +D+RL N+ + ++L  DMI++AE +   AVK+ + P  
Sbjct: 331 ANLNDVDGLKICFEEWKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFY 390

Query: 211 GTLMKFMRFYLHKHQMKLAGKYFEEATLKVKVNHWKASQETVSLFLNYFEEEKDADGAEY 32
             L  FM  +L   ++  A KY E A  +VK N W+ + E V  FL YFEEEKD +GAE 
Sbjct: 391 TALDMFMAHHLKVREIDTALKYMEAAASEVKNNEWQPAPERVLAFLKYFEEEKDVEGAEK 450

Query: 31  FCKLLKNIN 5
           FCK+LKNI+
Sbjct: 451 FCKILKNIS 459


>emb|CBI36964.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  116 bits (290), Expect = 2e-24
 Identities = 59/129 (45%), Positives = 82/129 (63%)
 Frame = -1

Query: 391 SRLGDTDGLEKYFEEWESSYTLYDIRLTNILIDSYLERDMIEEAEKLREGAVKKGAEPNV 212
           + L D DGL+  FEEW+SS   +D+RL N+ + ++L  DMI++AE +   AVK+ + P  
Sbjct: 370 ANLNDVDGLKICFEEWKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFY 429

Query: 211 GTLMKFMRFYLHKHQMKLAGKYFEEATLKVKVNHWKASQETVSLFLNYFEEEKDADGAEY 32
             L  FM  +L   ++  A KY E A  +VK N W+ + E V  FL YFEEEKD +GAE 
Sbjct: 430 TALDMFMAHHLKVREIDTALKYMEAAASEVKNNEWQPAPERVLAFLKYFEEEKDVEGAEK 489

Query: 31  FCKLLKNIN 5
           FCK+LKNI+
Sbjct: 490 FCKILKNIS 498


>ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g60770-like [Glycine max]
          Length = 490

 Score =  111 bits (277), Expect = 7e-23
 Identities = 58/126 (46%), Positives = 79/126 (62%), Gaps = 2/126 (1%)
 Frame = -1

Query: 385 LGDTDGLEKYFEEWESSYTLYDIRLTNILIDSYLERDMIEEAEKLREGAVKKGAEPNVGT 206
           L D  G EK F EWE     YDIR+ N+LI +Y++ DM+E+AE+L+E A ++GA+PN  T
Sbjct: 312 LKDLPGAEKCFREWECGCPTYDIRVANVLIRAYVKLDMLEKAEELKERARRRGAKPNAKT 371

Query: 205 LMKFMRFYLHKHQMKLAGKYFEEATLKVKVN--HWKASQETVSLFLNYFEEEKDADGAEY 32
           L  FM +YL K   KLA  Y  EA    + N   W  S   +S+ + +FE+EKD DGAE 
Sbjct: 372 LEIFMDYYLLKGDFKLAVDYLNEAISMGRGNGEKWVPSSRIISIMMRHFEQEKDVDGAEE 431

Query: 31  FCKLLK 14
           F ++LK
Sbjct: 432 FLEILK 437