BLASTX nr result

ID: Coptis25_contig00023304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023304
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267702.2| PREDICTED: zinc finger CCCH domain-containin...    63   2e-08
emb|CBI32233.3| unnamed protein product [Vitis vinifera]               63   3e-08
emb|CAN75696.1| hypothetical protein VITISV_035983 [Vitis vinifera]    63   3e-08
emb|CBI17036.3| unnamed protein product [Vitis vinifera]               58   7e-07
emb|CBI26086.3| unnamed protein product [Vitis vinifera]               58   9e-07

>ref|XP_002267702.2| PREDICTED: zinc finger CCCH domain-containing protein 43-like
           [Vitis vinifera] gi|297739472|emb|CBI29654.3| unnamed
           protein product [Vitis vinifera]
          Length = 299

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/111 (30%), Positives = 49/111 (44%)
 Frame = -1

Query: 338 EKMSKNYNVQYTQRQLKNQWDYLRKQYAAWRVLSKRTGHGVDFVGGVLDFPNDIWDDIIK 159
           E++ K    ++T +QLKN+WDY+++QY  W  +   TGHG + V    D+P + W++   
Sbjct: 77  EELEKLLGKRFTSKQLKNEWDYMKRQYLIWSKMMTMTGHGYNSVTKTFDWPAEKWEE--- 133

Query: 158 IEINNFLVXXXXXXXXTLLIV*PYFLFAIYCYKQKYPLATHFRNAPLANSE 6
                                          Y QKYP A  FR  PLAN E
Sbjct: 134 -------------------------------YLQKYPEAKQFRFKPLANME 153


>emb|CBI32233.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/111 (31%), Positives = 47/111 (42%)
 Frame = -1

Query: 338 EKMSKNYNVQYTQRQLKNQWDYLRKQYAAWRVLSKRTGHGVDFVGGVLDFPNDIWDDIIK 159
           EK+ K    +YT +QLKN WDY+++QY  W  +   TGHG + V    D+P + W++   
Sbjct: 49  EKLEKLLRKRYTSKQLKNGWDYMKRQYLIWSKMMTMTGHGYNSVTKTFDWPAEKWEE--- 105

Query: 158 IEINNFLVXXXXXXXXTLLIV*PYFLFAIYCYKQKYPLATHFRNAPLANSE 6
                                          Y QKYP    FR  PLAN E
Sbjct: 106 -------------------------------YLQKYPETKQFRFKPLANVE 125


>emb|CAN75696.1| hypothetical protein VITISV_035983 [Vitis vinifera]
          Length = 596

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/111 (31%), Positives = 48/111 (43%)
 Frame = -1

Query: 338 EKMSKNYNVQYTQRQLKNQWDYLRKQYAAWRVLSKRTGHGVDFVGGVLDFPNDIWDDIIK 159
           E++ K    +YT +QLKN WDY+++QY  W  +   TGHG + V    D+P + W++   
Sbjct: 49  EELEKLLGKRYTSKQLKNGWDYMKRQYLIWSKMMTMTGHGYNSVTKTFDWPAEKWEE--- 105

Query: 158 IEINNFLVXXXXXXXXTLLIV*PYFLFAIYCYKQKYPLATHFRNAPLANSE 6
                                          Y QKYP A  FR  PLAN E
Sbjct: 106 -------------------------------YLQKYPEAKQFRFKPLANVE 125


>emb|CBI17036.3| unnamed protein product [Vitis vinifera]
          Length = 157

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/111 (30%), Positives = 46/111 (41%)
 Frame = -1

Query: 338 EKMSKNYNVQYTQRQLKNQWDYLRKQYAAWRVLSKRTGHGVDFVGGVLDFPNDIWDDIIK 159
           E++ K     YT +QLKN WDY+++QY  W  +   TGHG + V    D+P + W++   
Sbjct: 65  EELEKLLGKCYTSKQLKNGWDYMKRQYLIWSKMMTMTGHGYNSVTKTFDWPAEKWEE--- 121

Query: 158 IEINNFLVXXXXXXXXTLLIV*PYFLFAIYCYKQKYPLATHFRNAPLANSE 6
                                          Y QKYP A  F   PLAN E
Sbjct: 122 -------------------------------YLQKYPEAKQFCFKPLANVE 141


>emb|CBI26086.3| unnamed protein product [Vitis vinifera]
          Length = 228

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/111 (29%), Positives = 46/111 (41%)
 Frame = -1

Query: 338 EKMSKNYNVQYTQRQLKNQWDYLRKQYAAWRVLSKRTGHGVDFVGGVLDFPNDIWDDIIK 159
           +++ K    ++ Q+QLKN WDY++KQY  W  L    G G + V    D P + W++   
Sbjct: 69  KELEKLVGKRFNQKQLKNAWDYMKKQYLTWSRLITMMGDGYNSVTKTFDLPTERWEE--- 125

Query: 158 IEINNFLVXXXXXXXXTLLIV*PYFLFAIYCYKQKYPLATHFRNAPLANSE 6
                                          Y QKYP A  FR  PLAN+E
Sbjct: 126 -------------------------------YLQKYPEAKQFRYRPLANAE 145


Top