BLASTX nr result

ID: Coptis25_contig00023303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023303
         (663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27927.3| unnamed protein product [Vitis vinifera]              281   8e-74
ref|XP_002279729.1| PREDICTED: uncharacterized protein LOC100262...   281   8e-74
ref|XP_002308297.1| predicted protein [Populus trichocarpa] gi|2...   264   1e-68
ref|XP_002514143.1| conserved hypothetical protein [Ricinus comm...   255   5e-66
ref|XP_002867402.1| hypothetical protein ARALYDRAFT_491802 [Arab...   248   1e-63

>emb|CBI27927.3| unnamed protein product [Vitis vinifera]
          Length = 500

 Score =  281 bits (719), Expect = 8e-74
 Identities = 139/220 (63%), Positives = 173/220 (78%)
 Frame = +1

Query: 1   KTIGLADEIRRLCFPDGKGGGGYPFVVLGLIEPWEADDETASILLSHLTSGEGEDILWQC 180
           KT GLA +I  LC   G    G  F +LGLIEPW+ADDE AS+L+SHL+ G  E++ W  
Sbjct: 243 KTGGLAVQIHELCLQRG----GDSFAILGLIEPWKADDEAASVLISHLSDGSEEELGWPS 298

Query: 181 QVLCAVILPKMLVLSGPASRVLMSATIEFCKLHQKASVDALLFPLLLCKDGINNPICEVV 360
           QV+C++ILPK+LVL  PASRVL++ATIE+CKLHQ+A+V  LLFPLLL + GINNPIC+VV
Sbjct: 299 QVVCSIILPKLLVLEEPASRVLVTATIEYCKLHQRAAVYGLLFPLLLRRGGINNPICDVV 358

Query: 361 TRIIRECLHPPHVSSFCQKLVSKEHERRRLVYIPRHQWLMTDELVWTESLFTLFQNILNH 540
            RII+ECLHP HVS+F QKL+ +E   R  + +P HQ+L+++ELVWTESLF L QNILNH
Sbjct: 359 VRIIKECLHPAHVSAFFQKLLCEEEHVRSFICLPCHQYLISNELVWTESLFNLLQNILNH 418

Query: 541 NVYLTQDTVDRLVSIVQQLDYEYSKSLKFGNFLLSLVTKC 660
           NV+LTQD++D LV  VQ+L   +SKSLKFGNFLL LVTKC
Sbjct: 419 NVHLTQDSIDHLVYRVQELAEAFSKSLKFGNFLLCLVTKC 458


>ref|XP_002279729.1| PREDICTED: uncharacterized protein LOC100262802 [Vitis vinifera]
          Length = 491

 Score =  281 bits (719), Expect = 8e-74
 Identities = 139/220 (63%), Positives = 173/220 (78%)
 Frame = +1

Query: 1   KTIGLADEIRRLCFPDGKGGGGYPFVVLGLIEPWEADDETASILLSHLTSGEGEDILWQC 180
           KT GLA +I  LC   G    G  F +LGLIEPW+ADDE AS+L+SHL+ G  E++ W  
Sbjct: 243 KTGGLAVQIHELCLQRG----GDSFAILGLIEPWKADDEAASVLISHLSDGSEEELGWPS 298

Query: 181 QVLCAVILPKMLVLSGPASRVLMSATIEFCKLHQKASVDALLFPLLLCKDGINNPICEVV 360
           QV+C++ILPK+LVL  PASRVL++ATIE+CKLHQ+A+V  LLFPLLL + GINNPIC+VV
Sbjct: 299 QVVCSIILPKLLVLEEPASRVLVTATIEYCKLHQRAAVYGLLFPLLLRRGGINNPICDVV 358

Query: 361 TRIIRECLHPPHVSSFCQKLVSKEHERRRLVYIPRHQWLMTDELVWTESLFTLFQNILNH 540
            RII+ECLHP HVS+F QKL+ +E   R  + +P HQ+L+++ELVWTESLF L QNILNH
Sbjct: 359 VRIIKECLHPAHVSAFFQKLLCEEEHVRSFICLPCHQYLISNELVWTESLFNLLQNILNH 418

Query: 541 NVYLTQDTVDRLVSIVQQLDYEYSKSLKFGNFLLSLVTKC 660
           NV+LTQD++D LV  VQ+L   +SKSLKFGNFLL LVTKC
Sbjct: 419 NVHLTQDSIDHLVYRVQELAEAFSKSLKFGNFLLCLVTKC 458


>ref|XP_002308297.1| predicted protein [Populus trichocarpa] gi|222854273|gb|EEE91820.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score =  264 bits (674), Expect = 1e-68
 Identities = 128/222 (57%), Positives = 174/222 (78%), Gaps = 2/222 (0%)
 Frame = +1

Query: 1   KTIGLADEIRRLCFPDGKGGGGYPFVVLGLIEPWEADDETASILLSHLTSG--EGEDILW 174
           KT+ LA+EIRRL F         PFV+LGL+EPW+ADDETASIL+ HL++G  E E+I W
Sbjct: 238 KTVELANEIRRLSFEREAD----PFVILGLLEPWKADDETASILVFHLSNGREEEEEIAW 293

Query: 175 QCQVLCAVILPKMLVLSGPASRVLMSATIEFCKLHQKASVDALLFPLLLCKDGINNPICE 354
             +VLC+++LPKMLVL  PASRVL+ + +E+CKLHQ+A+  ALL PL++ + GINN +C+
Sbjct: 294 PSKVLCSIMLPKMLVLEEPASRVLVISMVEYCKLHQRAAECALLLPLIMKRSGINNHMCD 353

Query: 355 VVTRIIRECLHPPHVSSFCQKLVSKEHERRRLVYIPRHQWLMTDELVWTESLFTLFQNIL 534
           V+TRI++E LHP HVS+FC+KL+  +   +R + +P HQ L++ +LVWTESLF LFQNIL
Sbjct: 354 VITRIVKESLHPAHVSAFCRKLLCGQEVEKRSIILPCHQCLVSSQLVWTESLFNLFQNIL 413

Query: 535 NHNVYLTQDTVDRLVSIVQQLDYEYSKSLKFGNFLLSLVTKC 660
           NHNV LTQD+VD+LV ++++L   +SKSLKFGNFLL  +T+C
Sbjct: 414 NHNVQLTQDSVDQLVLLIRELAPSFSKSLKFGNFLLCFITRC 455


>ref|XP_002514143.1| conserved hypothetical protein [Ricinus communis]
           gi|223546599|gb|EEF48097.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 493

 Score =  255 bits (652), Expect = 5e-66
 Identities = 128/221 (57%), Positives = 167/221 (75%), Gaps = 1/221 (0%)
 Frame = +1

Query: 1   KTIGLADEIRRLCFPDGKGGGGYPFVVLGLIEPWEADDETASILLSHLTSG-EGEDILWQ 177
           +T+ LA+ IR+LC   G       F VLGL+EPW+ADDE AS+LL HL +G + +++ W 
Sbjct: 244 RTVELANVIRKLCLDKGVNS----FAVLGLVEPWKADDEIASVLLPHLLNGIDHKELDWP 299

Query: 178 CQVLCAVILPKMLVLSGPASRVLMSATIEFCKLHQKASVDALLFPLLLCKDGINNPICEV 357
            QVL +VILPKML+L  PASR+L++ATI++CKLHQ A+  ALLFPL++   GINN +C+V
Sbjct: 300 SQVLSSVILPKMLILEEPASRMLVAATIDYCKLHQAAAEYALLFPLIMRTGGINNSLCDV 359

Query: 358 VTRIIRECLHPPHVSSFCQKLVSKEHERRRLVYIPRHQWLMTDELVWTESLFTLFQNILN 537
           +TRII+ECLHP HVSSFCQKL+     ++R + +P HQ L+++ELVWTESLF LF NILN
Sbjct: 360 MTRIIKECLHPVHVSSFCQKLLCGGASKKRFICLPCHQCLISNELVWTESLFNLFHNILN 419

Query: 538 HNVYLTQDTVDRLVSIVQQLDYEYSKSLKFGNFLLSLVTKC 660
            N+ LTQD VD+L   VQ+L   +SKSLKFGNFLL  +TKC
Sbjct: 420 LNIQLTQDLVDQLALRVQELAQMFSKSLKFGNFLLCFITKC 460


>ref|XP_002867402.1| hypothetical protein ARALYDRAFT_491802 [Arabidopsis lyrata subsp.
           lyrata] gi|297313238|gb|EFH43661.1| hypothetical protein
           ARALYDRAFT_491802 [Arabidopsis lyrata subsp. lyrata]
          Length = 493

 Score =  248 bits (632), Expect = 1e-63
 Identities = 126/220 (57%), Positives = 164/220 (74%), Gaps = 1/220 (0%)
 Frame = +1

Query: 1   KTIGLADEIRRLCFPDGKGGGGYPFVVLGLIEPWEADDETASILLSHLTSGEGEDIL-WQ 177
           + + L +EIR+LC   G+      F VL LIEPW ADDETA++LLS+L SG  ED L W 
Sbjct: 244 EVLTLCNEIRKLCLEKGRDS----FRVLALIEPWNADDETAAVLLSNLQSGSEEDELGWP 299

Query: 178 CQVLCAVILPKMLVLSGPASRVLMSATIEFCKLHQKASVDALLFPLLLCKDGINNPICEV 357
            QVLC+++LPK + L   ASRVLMS+TIEFCK+HQ+A+  AL+FPL+L ++GINN ICEV
Sbjct: 300 SQVLCSIVLPKFVSLEKSASRVLMSSTIEFCKIHQRAAEYALVFPLILRREGINNFICEV 359

Query: 358 VTRIIRECLHPPHVSSFCQKLVSKEHERRRLVYIPRHQWLMTDELVWTESLFTLFQNILN 537
           ++R+++ECLH   +S FCQKL+    E RR +++P H+ L++DEL+W ESLF LFQNIL 
Sbjct: 360 ISRVLKECLHLGQISGFCQKLLCGRTEERRFMFLPCHRELISDELIWNESLFILFQNILI 419

Query: 538 HNVYLTQDTVDRLVSIVQQLDYEYSKSLKFGNFLLSLVTK 657
           H+V L+QD+VD LVS VQ+L   YSKSLKFGNFLL    K
Sbjct: 420 HDVPLSQDSVDCLVSKVQELAERYSKSLKFGNFLLHFTAK 459


Top