BLASTX nr result

ID: Coptis25_contig00023290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023290
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278573.1| PREDICTED: uncharacterized membrane protein ...   123   2e-26
ref|XP_002321138.1| predicted protein [Populus trichocarpa] gi|2...   121   7e-26
gb|AFK40201.1| unknown [Lotus japonicus]                              120   1e-25
ref|XP_002301613.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
ref|XP_002317329.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25

>ref|XP_002278573.1| PREDICTED: uncharacterized membrane protein yuiD [Vitis vinifera]
           gi|297737478|emb|CBI26679.3| unnamed protein product
           [Vitis vinifera]
          Length = 166

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/82 (73%), Positives = 64/82 (78%)
 Frame = +1

Query: 172 TTWYKEKRWDSKRMFGSGGMPSSHSATVTALSVAIGLQDGXXXXXXXXXXXXXXXXMYDA 351
           TTWYKEKRWDS+RM GSGGMPSSHSATVTAL+VAIG Q+G                MYDA
Sbjct: 47  TTWYKEKRWDSRRMLGSGGMPSSHSATVTALAVAIGFQEGTGGSAFAIAVVLACVVMYDA 106

Query: 352 SGVRLHAGRQAEVLNQIVCELP 417
           SGVRLHAGRQAE+LNQIVCELP
Sbjct: 107 SGVRLHAGRQAELLNQIVCELP 128


>ref|XP_002321138.1| predicted protein [Populus trichocarpa] gi|222861911|gb|EEE99453.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  121 bits (303), Expect = 7e-26
 Identities = 59/82 (71%), Positives = 63/82 (76%)
 Frame = +1

Query: 172 TTWYKEKRWDSKRMFGSGGMPSSHSATVTALSVAIGLQDGXXXXXXXXXXXXXXXXMYDA 351
           TTWYKEKRWDSKRM  SGGMPSSHSATVTAL+VA+GLQ+G                MYDA
Sbjct: 58  TTWYKEKRWDSKRMLDSGGMPSSHSATVTALAVAVGLQEGTGSPAFAIVVVLACVVMYDA 117

Query: 352 SGVRLHAGRQAEVLNQIVCELP 417
           SGVRLHAGRQAE+LNQIVCE P
Sbjct: 118 SGVRLHAGRQAELLNQIVCEFP 139


>gb|AFK40201.1| unknown [Lotus japonicus]
          Length = 169

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/82 (71%), Positives = 64/82 (78%)
 Frame = +1

Query: 172 TTWYKEKRWDSKRMFGSGGMPSSHSATVTALSVAIGLQDGXXXXXXXXXXXXXXXXMYDA 351
           TTWYKEKRWDSKRM  SGGMPSSHSATV+AL++AIGLQ+G                MYDA
Sbjct: 48  TTWYKEKRWDSKRMLDSGGMPSSHSATVSALALAIGLQEGAGSPAFAIAVVLSCIVMYDA 107

Query: 352 SGVRLHAGRQAEVLNQIVCELP 417
           SGVRLHAGRQAE+LNQIVCELP
Sbjct: 108 SGVRLHAGRQAELLNQIVCELP 129


>ref|XP_002301613.1| predicted protein [Populus trichocarpa] gi|222843339|gb|EEE80886.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score =  120 bits (300), Expect = 2e-25
 Identities = 59/82 (71%), Positives = 63/82 (76%)
 Frame = +1

Query: 172 TTWYKEKRWDSKRMFGSGGMPSSHSATVTALSVAIGLQDGXXXXXXXXXXXXXXXXMYDA 351
           TTW+KEKRWDSKRM  SGGMPSSHSATVTAL+VAIGLQ+G                MYDA
Sbjct: 22  TTWFKEKRWDSKRMLDSGGMPSSHSATVTALAVAIGLQEGTGSPAFAIVVVLACVVMYDA 81

Query: 352 SGVRLHAGRQAEVLNQIVCELP 417
           SGVRLHAGRQAE+LNQIVCE P
Sbjct: 82  SGVRLHAGRQAELLNQIVCEFP 103


>ref|XP_002317329.1| predicted protein [Populus trichocarpa] gi|222860394|gb|EEE97941.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/82 (69%), Positives = 64/82 (78%)
 Frame = +1

Query: 172 TTWYKEKRWDSKRMFGSGGMPSSHSATVTALSVAIGLQDGXXXXXXXXXXXXXXXXMYDA 351
           TTW+KEKRWD++RM GSGGMPSSHSATVTAL+ AIGLQ+G                MYDA
Sbjct: 47  TTWFKEKRWDARRMLGSGGMPSSHSATVTALATAIGLQEGTGAPAFAVALVLACVVMYDA 106

Query: 352 SGVRLHAGRQAEVLNQIVCELP 417
           +GVRLHAGRQAE+LNQIVCELP
Sbjct: 107 TGVRLHAGRQAELLNQIVCELP 128


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