BLASTX nr result

ID: Coptis25_contig00023289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023289
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25886.3| unnamed protein product [Vitis vinifera]              268   1e-69
ref|XP_004137207.1| PREDICTED: GTP-binding protein At3g49725, ch...   251   1e-64
tpg|DAA51141.1| TPA: hypothetical protein ZEAMMB73_713960 [Zea m...   244   1e-62
ref|NP_001145694.1| uncharacterized protein LOC100279198 [Zea ma...   244   1e-62
ref|XP_004156554.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding ...   243   4e-62

>emb|CBI25886.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  268 bits (684), Expect = 1e-69
 Identities = 145/255 (56%), Positives = 171/255 (67%), Gaps = 2/255 (0%)
 Frame = +2

Query: 2   RSDVALKAKLSEALNLANSLEEQRDGFFVGDISEKERPAHVVVQNPVARS--INSGTYFG 175
           R D  L+AKL EA+NLANSLEEQRDG++  ++ EK  P HVVVQNP  RS    S TYFG
Sbjct: 98  RPDTLLQAKLDEAINLANSLEEQRDGYYDTELCEKGLPPHVVVQNPAVRSSKYRSDTYFG 157

Query: 176 SGTVKTIKCHIDAEETKDEFDAVFVNAILSGVQQRNLEREWGKPILDRVGLIIEIFHAHA 355
            GTV T+KCH++A E+K E DAV+VN ILSG+QQRNLER WGKP+LDRVGLIIEIF+AHA
Sbjct: 158 PGTVDTVKCHLNAVESKGEIDAVYVNTILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHA 217

Query: 356 QTREAKLQSELAALMYRRTRLIRLRSLEGKFTFGASGEAEVVXXXXXXXXXXXXXXXXXE 535
           QT+EAKLQ+ELAALMY+RTRL+R+R  +G++TFGA+GE EVV                 E
Sbjct: 218 QTKEAKLQAELAALMYKRTRLVRVRGPDGRYTFGATGETEVVSARGRGSGGRGFISGAGE 277

Query: 536 TXXXXXXXXXXXXXXXXXSQIEEVXXXXXXXXXXXXXXXXXXXXXXSTVAIVGYTNAGKS 715
           T                 SQIE V                      +TVAIVGYTNAGKS
Sbjct: 278 TELQLQRRRILERRNHLLSQIEAVRRTRALQRASRKRRGGSNGQGLATVAIVGYTNAGKS 337

Query: 716 TLVNALSESDLYSDD 760
           TLV+ALSESDL+SDD
Sbjct: 338 TLVSALSESDLFSDD 352


>ref|XP_004137207.1| PREDICTED: GTP-binding protein At3g49725, chloroplastic-like
           [Cucumis sativus]
          Length = 593

 Score =  251 bits (641), Expect = 1e-64
 Identities = 136/247 (55%), Positives = 164/247 (66%)
 Frame = +2

Query: 17  LKAKLSEALNLANSLEEQRDGFFVGDISEKERPAHVVVQNPVARSINSGTYFGSGTVKTI 196
           L+AKL+EAL LANSLEEQRDG+F  D  +K+ P +VVVQNP  R   + TYFG GTV TI
Sbjct: 92  LQAKLNEALCLANSLEEQRDGYFHIDFFDKDVPPYVVVQNPSVRGARADTYFGPGTVDTI 151

Query: 197 KCHIDAEETKDEFDAVFVNAILSGVQQRNLEREWGKPILDRVGLIIEIFHAHAQTREAKL 376
           KCH++A E+K E DA+FVNA LSG QQRNLE  W KP+LDRVGLIIEIF+AHA T+EAKL
Sbjct: 152 KCHLNAAESKSEVDAIFVNATLSGSQQRNLEWAWNKPVLDRVGLIIEIFNAHAYTKEAKL 211

Query: 377 QSELAALMYRRTRLIRLRSLEGKFTFGASGEAEVVXXXXXXXXXXXXXXXXXETXXXXXX 556
           Q+ELAALMY+++RL+R+R L+G++ FGA GEAEVV                 ET      
Sbjct: 212 QAELAALMYKKSRLVRVRGLDGRYAFGARGEAEVVSARGRGSGGRGFISGAGETELQLQR 271

Query: 557 XXXXXXXXXXXSQIEEVXXXXXXXXXXXXXXXXXXXXXXSTVAIVGYTNAGKSTLVNALS 736
                      SQIEEV                      +TVA+VGYTNAGKSTLV+ALS
Sbjct: 272 RRILERRNHLYSQIEEVRRTRSLQRASRKRHGGSNGQHLATVAVVGYTNAGKSTLVSALS 331

Query: 737 ESDLYSD 757
           ++DLYSD
Sbjct: 332 DNDLYSD 338


>tpg|DAA51141.1| TPA: hypothetical protein ZEAMMB73_713960 [Zea mays]
           gi|414872585|tpg|DAA51142.1| TPA: hypothetical protein
           ZEAMMB73_713960 [Zea mays]
          Length = 588

 Score =  244 bits (623), Expect = 1e-62
 Identities = 133/249 (53%), Positives = 164/249 (65%), Gaps = 1/249 (0%)
 Frame = +2

Query: 17  LKAKLSEALNLANSLEEQRDGFFVGDISEKERPAHVVVQNPVARS-INSGTYFGSGTVKT 193
           L++KL+EALNLANSLEE+RDGF+  +   K  P H+VVQNP +R   ++ TYFG GTV  
Sbjct: 81  LESKLAEALNLANSLEERRDGFYHSEFGAKGAPPHLVVQNPASRGRSHADTYFGPGTVDN 140

Query: 194 IKCHIDAEETKDEFDAVFVNAILSGVQQRNLEREWGKPILDRVGLIIEIFHAHAQTREAK 373
           +KC++ A E++++ DAVFVNAILSG+QQRNLE  WGK +LDRVGLIIEIF+AHA+T+EAK
Sbjct: 141 VKCYLSATESEEDVDAVFVNAILSGIQQRNLEVAWGKSVLDRVGLIIEIFNAHAETKEAK 200

Query: 374 LQSELAALMYRRTRLIRLRSLEGKFTFGASGEAEVVXXXXXXXXXXXXXXXXXETXXXXX 553
           LQSELAALMY +TRL+R+R   G+ TFG SGEAEVV                 ET     
Sbjct: 201 LQSELAALMYMKTRLVRVRGPGGRLTFGPSGEAEVVSARGRGSGGRGFMSGAGETELQLQ 260

Query: 554 XXXXXXXXXXXXSQIEEVXXXXXXXXXXXXXXXXXXXXXXSTVAIVGYTNAGKSTLVNAL 733
                       +QIE+V                       TVA+VGYTNAGKSTLV+AL
Sbjct: 261 RRRIQERRVSLLAQIEDVRRTRAIQRSSRKRHGGSFGQELVTVAVVGYTNAGKSTLVSAL 320

Query: 734 SESDLYSDD 760
           SE+DLYSDD
Sbjct: 321 SEADLYSDD 329


>ref|NP_001145694.1| uncharacterized protein LOC100279198 [Zea mays]
           gi|219884045|gb|ACL52397.1| unknown [Zea mays]
          Length = 588

 Score =  244 bits (623), Expect = 1e-62
 Identities = 133/249 (53%), Positives = 164/249 (65%), Gaps = 1/249 (0%)
 Frame = +2

Query: 17  LKAKLSEALNLANSLEEQRDGFFVGDISEKERPAHVVVQNPVARS-INSGTYFGSGTVKT 193
           L++KL+EALNLANSLEE+RDGF+  +   K  P H+VVQNP +R   ++ TYFG GTV  
Sbjct: 81  LESKLAEALNLANSLEERRDGFYHSEFGAKGAPPHLVVQNPASRGRSHADTYFGPGTVDN 140

Query: 194 IKCHIDAEETKDEFDAVFVNAILSGVQQRNLEREWGKPILDRVGLIIEIFHAHAQTREAK 373
           +KC++ A E++++ DAVFVNAILSG+QQRNLE  WGK +LDRVGLIIEIF+AHA+T+EAK
Sbjct: 141 VKCYLSATESEEDVDAVFVNAILSGIQQRNLEVAWGKSVLDRVGLIIEIFNAHAETKEAK 200

Query: 374 LQSELAALMYRRTRLIRLRSLEGKFTFGASGEAEVVXXXXXXXXXXXXXXXXXETXXXXX 553
           LQSELAALMY +TRL+R+R   G+ TFG SGEAEVV                 ET     
Sbjct: 201 LQSELAALMYMKTRLVRVRGPGGRLTFGPSGEAEVVSARGRGSGGRGFMSGAGETELQLQ 260

Query: 554 XXXXXXXXXXXXSQIEEVXXXXXXXXXXXXXXXXXXXXXXSTVAIVGYTNAGKSTLVNAL 733
                       +QIE+V                       TVA+VGYTNAGKSTLV+AL
Sbjct: 261 RRRIQERRVSLLAQIEDVRRTRAIQRSSRKRHGGSFGQELVTVAVVGYTNAGKSTLVSAL 320

Query: 734 SESDLYSDD 760
           SE+DLYSDD
Sbjct: 321 SEADLYSDD 329


>ref|XP_004156554.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding protein At3g49725,
           chloroplastic-like [Cucumis sativus]
          Length = 631

 Score =  243 bits (619), Expect = 4e-62
 Identities = 133/247 (53%), Positives = 161/247 (65%)
 Frame = +2

Query: 17  LKAKLSEALNLANSLEEQRDGFFVGDISEKERPAHVVVQNPVARSINSGTYFGSGTVKTI 196
           L+AKL+EAL LANSLEEQRDG+F  D  +K+ P +VVVQNP  R   + TYFG GTV TI
Sbjct: 92  LQAKLNEALCLANSLEEQRDGYFHIDFFDKDVPPYVVVQNPSVRGARADTYFGPGTVDTI 151

Query: 197 KCHIDAEETKDEFDAVFVNAILSGVQQRNLEREWGKPILDRVGLIIEIFHAHAQTREAKL 376
           KCH++A E+K     +FVNA LSG QQRNLE  W KP+LDRVGLIIEIF+AHA T+EAKL
Sbjct: 152 KCHLNAAESKVXSRCIFVNATLSGSQQRNLEWAWNKPVLDRVGLIIEIFNAHAYTKEAKL 211

Query: 377 QSELAALMYRRTRLIRLRSLEGKFTFGASGEAEVVXXXXXXXXXXXXXXXXXETXXXXXX 556
           Q+ELAALMY+++RL+R+R L+G++ FGA GEAEVV                 ET      
Sbjct: 212 QAELAALMYKKSRLVRVRGLDGRYAFGARGEAEVVSARGRGSGGRGFISGAGETELQLQR 271

Query: 557 XXXXXXXXXXXSQIEEVXXXXXXXXXXXXXXXXXXXXXXSTVAIVGYTNAGKSTLVNALS 736
                      SQIEEV                      +TVA+VGYTNAGKSTLV+ALS
Sbjct: 272 RRILERRNHLYSQIEEVRRTRSLQRASRKRHGGSNGQHLATVAVVGYTNAGKSTLVSALS 331

Query: 737 ESDLYSD 757
           ++DLYSD
Sbjct: 332 DNDLYSD 338


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