BLASTX nr result

ID: Coptis25_contig00023283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023283
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534089.1| PREDICTED: uncharacterized protein LOC100101...    87   4e-21
gb|ABH02927.1| MYB transcription factor MYB140 [Glycine max]           87   4e-21
ref|XP_003600632.1| MYB transcription factor MYB174 [Medicago tr...    93   6e-21
ref|XP_003534090.1| PREDICTED: uncharacterized protein LOC100101...    86   1e-20
ref|XP_003548314.1| PREDICTED: uncharacterized protein LOC778089...    88   3e-20

>ref|XP_003534089.1| PREDICTED: uncharacterized protein LOC100101861 isoform 1 [Glycine
           max]
          Length = 466

 Score = 87.0 bits (214), Expect(2) = 4e-21
 Identities = 37/47 (78%), Positives = 44/47 (93%)
 Frame = +3

Query: 345 ASKARKPYTISKQQERWTEEEHKKFLEALKLYGRAWRRIEEHVGTKS 485
           A K RKPYTI+KQ+E+WTEEEH+KFLEALKLYGR WR+IEEH+GTK+
Sbjct: 33  APKVRKPYTITKQREKWTEEEHQKFLEALKLYGRGWRQIEEHIGTKT 79



 Score = 40.0 bits (92), Expect(2) = 4e-21
 Identities = 19/25 (76%), Positives = 22/25 (88%)
 Frame = +2

Query: 485 SKTAVQIRSHAQNIFSKVVREYDVT 559
           +KTAVQIRSHAQ  FSKVVRE +V+
Sbjct: 77  TKTAVQIRSHAQKFFSKVVRESEVS 101


>gb|ABH02927.1| MYB transcription factor MYB140 [Glycine max]
          Length = 141

 Score = 87.0 bits (214), Expect(2) = 4e-21
 Identities = 37/47 (78%), Positives = 44/47 (93%)
 Frame = +3

Query: 345 ASKARKPYTISKQQERWTEEEHKKFLEALKLYGRAWRRIEEHVGTKS 485
           A K RKPYTI+KQ+E+WTEEEH+KFLEALKLYGR WR+IEEH+GTK+
Sbjct: 33  APKVRKPYTITKQREKWTEEEHQKFLEALKLYGRGWRQIEEHIGTKT 79



 Score = 40.0 bits (92), Expect(2) = 4e-21
 Identities = 19/25 (76%), Positives = 22/25 (88%)
 Frame = +2

Query: 485 SKTAVQIRSHAQNIFSKVVREYDVT 559
           +KTAVQIRSHAQ  FSKVVRE +V+
Sbjct: 77  TKTAVQIRSHAQKFFSKVVRESEVS 101


>ref|XP_003600632.1| MYB transcription factor MYB174 [Medicago truncatula]
           gi|355489680|gb|AES70883.1| MYB transcription factor
           MYB174 [Medicago truncatula]
          Length = 356

 Score = 92.8 bits (229), Expect(2) = 6e-21
 Identities = 42/50 (84%), Positives = 47/50 (94%)
 Frame = +3

Query: 336 NENASKARKPYTISKQQERWTEEEHKKFLEALKLYGRAWRRIEEHVGTKS 485
           N+ A KARKPYTISKQ+ERWT+EEHKKFLEALKLYGRAWR IEEHVG+K+
Sbjct: 40  NDYALKARKPYTISKQRERWTDEEHKKFLEALKLYGRAWRSIEEHVGSKT 89



 Score = 33.5 bits (75), Expect(2) = 6e-21
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = +2

Query: 485 SKTAVQIRSHAQNIFSKV 538
           SKTA+QIRSHAQ  FSKV
Sbjct: 87  SKTAIQIRSHAQKFFSKV 104


>ref|XP_003534090.1| PREDICTED: uncharacterized protein LOC100101861 isoform 2 [Glycine
           max]
          Length = 450

 Score = 85.5 bits (210), Expect(2) = 1e-20
 Identities = 36/48 (75%), Positives = 44/48 (91%)
 Frame = +3

Query: 342 NASKARKPYTISKQQERWTEEEHKKFLEALKLYGRAWRRIEEHVGTKS 485
           N  + RKPYTI+KQ+E+WTEEEH+KFLEALKLYGR WR+IEEH+GTK+
Sbjct: 16  NFHQVRKPYTITKQREKWTEEEHQKFLEALKLYGRGWRQIEEHIGTKT 63



 Score = 40.0 bits (92), Expect(2) = 1e-20
 Identities = 19/25 (76%), Positives = 22/25 (88%)
 Frame = +2

Query: 485 SKTAVQIRSHAQNIFSKVVREYDVT 559
           +KTAVQIRSHAQ  FSKVVRE +V+
Sbjct: 61  TKTAVQIRSHAQKFFSKVVRESEVS 85


>ref|XP_003548314.1| PREDICTED: uncharacterized protein LOC778089 [Glycine max]
          Length = 477

 Score = 87.8 bits (216), Expect(2) = 3e-20
 Identities = 37/50 (74%), Positives = 44/50 (88%)
 Frame = +3

Query: 336 NENASKARKPYTISKQQERWTEEEHKKFLEALKLYGRAWRRIEEHVGTKS 485
           N    K RKPYTI+KQ+E+WTEEEH+KFLEALKLYGR WR+IEEH+GTK+
Sbjct: 40  NNQTPKVRKPYTITKQREKWTEEEHQKFLEALKLYGRGWRQIEEHIGTKN 89



 Score = 36.2 bits (82), Expect(2) = 3e-20
 Identities = 17/21 (80%), Positives = 18/21 (85%)
 Frame = +2

Query: 485 SKTAVQIRSHAQNIFSKVVRE 547
           +K AVQIRSHAQ  FSKVVRE
Sbjct: 87  TKNAVQIRSHAQKFFSKVVRE 107


Top