BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023264
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520151.1| protein with unknown function [Ricinus commu...   152   3e-35
ref|XP_002321756.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32
emb|CBI32027.3| unnamed protein product [Vitis vinifera]              140   8e-32
ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   140   8e-32
ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein lig...   137   7e-31

>ref|XP_002520151.1| protein with unknown function [Ricinus communis]
           gi|223540643|gb|EEF42206.1| protein with unknown
           function [Ricinus communis]
          Length = 387

 Score =  152 bits (384), Expect = 3e-35
 Identities = 69/112 (61%), Positives = 91/112 (81%)
 Frame = +1

Query: 13  QEEEKNSINNKVWSWGAGTEGQLGTTKLQDENHPQLIHYLSFTPKHISYLACGGAHVIAL 192
           +E E+     +VWSWGAGT+GQLGT KL+DE+ PQL+ + S + + IS LACGGAHVIAL
Sbjct: 11  KETEEREHEQQVWSWGAGTDGQLGTGKLEDEHLPQLLQFPSLSVRPISSLACGGAHVIAL 70

Query: 193 SREDGKVLSWGRGTSGQLGHGDMKNCLYPFPVKCLESFVVSYVSAGWNHSGF 348
           +  DGKVL+WGRGTSGQLGHG+M + ++P PV  L+SFV++++SAGW+HSGF
Sbjct: 71  NSGDGKVLTWGRGTSGQLGHGNMLSSVHPQPVTFLDSFVITHISAGWSHSGF 122


>ref|XP_002321756.1| predicted protein [Populus trichocarpa] gi|222868752|gb|EEF05883.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score =  142 bits (359), Expect = 2e-32
 Identities = 70/117 (59%), Positives = 92/117 (78%), Gaps = 2/117 (1%)
 Frame = +1

Query: 4   KERQEEEKNSINNKVWSWGAGTEGQLGTTKLQDENHPQLIH--YLSFTPKHISYLACGGA 177
           +E + +E+ S   ++WSWGAGTEGQLGT KL+DE  PQL+H  +LS + + IS LACGGA
Sbjct: 2   EEAKRDEEESKQQQIWSWGAGTEGQLGTGKLEDEYLPQLLHLPFLS-SAESISTLACGGA 60

Query: 178 HVIALSREDGKVLSWGRGTSGQLGHGDMKNCLYPFPVKCLESFVVSYVSAGWNHSGF 348
           HVIAL+   G+V +WGRGT+GQLGHG+M N L+P PV  L+S V+++VSAGW+HSGF
Sbjct: 61  HVIALT-SGGRVFTWGRGTTGQLGHGEMLNSLHPKPVSSLQSCVITHVSAGWSHSGF 116


>emb|CBI32027.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score =  140 bits (354), Expect = 8e-32
 Identities = 71/115 (61%), Positives = 89/115 (77%), Gaps = 1/115 (0%)
 Frame = +1

Query: 7   ERQEEEKNSINNKVWSWGAGTEGQLGTTKLQDENHPQLIHYLSFTPKH-ISYLACGGAHV 183
           E  E +K     ++WSWGAGT+GQLGTT+L+DE+ PQL+    F+    IS LACGGAHV
Sbjct: 10  EENERDKGG-EVEIWSWGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHV 68

Query: 184 IALSREDGKVLSWGRGTSGQLGHGDMKNCLYPFPVKCLESFVVSYVSAGWNHSGF 348
           +AL+  DGKV++WGRGTSGQLGHGDM + L P  VK LESFV+++VSAGW+HSGF
Sbjct: 69  LALTT-DGKVVTWGRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGF 122


>ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
          Length = 400

 Score =  140 bits (354), Expect = 8e-32
 Identities = 71/115 (61%), Positives = 89/115 (77%), Gaps = 1/115 (0%)
 Frame = +1

Query: 7   ERQEEEKNSINNKVWSWGAGTEGQLGTTKLQDENHPQLIHYLSFTPKH-ISYLACGGAHV 183
           E  E +K     ++WSWGAGT+GQLGTT+L+DE+ PQL+    F+    IS LACGGAHV
Sbjct: 2   EENERDKGG-EVEIWSWGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHV 60

Query: 184 IALSREDGKVLSWGRGTSGQLGHGDMKNCLYPFPVKCLESFVVSYVSAGWNHSGF 348
           +AL+  DGKV++WGRGTSGQLGHGDM + L P  VK LESFV+++VSAGW+HSGF
Sbjct: 61  LALTT-DGKVVTWGRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGF 114


>ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 388

 Score =  137 bits (346), Expect = 7e-31
 Identities = 68/116 (58%), Positives = 85/116 (73%), Gaps = 1/116 (0%)
 Frame = +1

Query: 4   KERQEEEKNSINNKVWSWGAGTEGQLGTTKLQDENHPQLIHYLSFTPKHISYLACGGAHV 183
           K   E++++    +VWSWGAGTEGQLGT  LQDE+ PQL+H   F+   IS LACGGAHV
Sbjct: 6   KTENEDDRDESEQRVWSWGAGTEGQLGTKILQDEHFPQLLH--QFSLSSISSLACGGAHV 63

Query: 184 IALSREDGKVLSWGRGTSGQLGHGD-MKNCLYPFPVKCLESFVVSYVSAGWNHSGF 348
           IAL+   GK LSWGRG SGQLGHG+ + N LYP  V  L+ + +++VSAGW+HSGF
Sbjct: 64  IALT-SAGKALSWGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGF 118