BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023256
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]       59   1e-10
emb|CAN68286.1| hypothetical protein VITISV_017015 [Vitis vinifera]    61   1e-10
emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera]    58   4e-10
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]    57   5e-10
emb|CAN74178.1| hypothetical protein VITISV_029257 [Vitis vinifera]    60   7e-10

>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
          Length = 1556

 Score = 58.9 bits (141), Expect(3) = 1e-10
 Identities = 25/44 (56%), Positives = 36/44 (81%)
 Frame = -3

Query: 138 RMRCMLSHSKLFRSYWVEIMRTAVHVINLSPSKSLNSDYPERVW 7
           R+RCMLS +KL + +W E + TAVHVINLSP+ +LN++ P++VW
Sbjct: 587 RVRCMLSKAKLPKHFWGEALYTAVHVINLSPAIALNAEVPDKVW 630



 Score = 26.9 bits (58), Expect(3) = 1e-10
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = -2

Query: 184 PQQNRIAERMNKTIVE 137
           PQ N +AERMN+T++E
Sbjct: 571 PQLNGLAERMNRTLIE 586



 Score = 24.3 bits (51), Expect(3) = 1e-10
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 218 HGIRHEQIVPKT 183
           HGIRHE+  PKT
Sbjct: 559 HGIRHEKTPPKT 570


>emb|CAN68286.1| hypothetical protein VITISV_017015 [Vitis vinifera]
          Length = 805

 Score = 61.2 bits (147), Expect(2) = 1e-10
 Identities = 28/45 (62%), Positives = 34/45 (75%)
 Frame = -3

Query: 138 RMRCMLSHSKLFRSYWVEIMRTAVHVINLSPSKSLNSDYPERVWS 4
           R+RCMLSH+KL +S+W E MRT V +INLSPS  L  D  ERVW+
Sbjct: 712 RIRCMLSHAKLPKSFWGEAMRTTVDLINLSPSYPLEGDITERVWT 756



 Score = 29.3 bits (64), Expect(2) = 1e-10
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = -2

Query: 214 GFVMSRLFPR-PQQNRIAERMNKTIVE 137
           G  + ++ P+ PQQN I ERMN+TI +
Sbjct: 685 GIKLEKMVPKTPQQNGIVERMNRTICD 711


>emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera]
          Length = 1302

 Score = 57.8 bits (138), Expect(3) = 4e-10
 Identities = 24/46 (52%), Positives = 34/46 (73%)
 Frame = -3

Query: 138 RMRCMLSHSKLFRSYWVEIMRTAVHVINLSPSKSLNSDYPERVWSS 1
           R+RC+LS S+L RS+W E + T VHV+NL+P   L  D P+R+WS+
Sbjct: 459 RVRCLLSQSQLPRSFWGEALNTVVHVLNLTPCVPLEFDVPDRIWSN 504



 Score = 27.3 bits (59), Expect(3) = 4e-10
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = -2

Query: 184 PQQNRIAERMNKTIVE 137
           PQ N +AERMN+T+VE
Sbjct: 443 PQLNGLAERMNRTLVE 458



 Score = 23.1 bits (48), Expect(3) = 4e-10
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 218 HGIRHEQIVPKT 183
           HGIRH++  PKT
Sbjct: 431 HGIRHQKTPPKT 442


>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
          Length = 1207

 Score = 57.4 bits (137), Expect(3) = 5e-10
 Identities = 24/45 (53%), Positives = 33/45 (73%)
 Frame = -3

Query: 138 RMRCMLSHSKLFRSYWVEIMRTAVHVINLSPSKSLNSDYPERVWS 4
           R+RC+LS S+L RS+W E + T VHV+NL+P   L  D P+R+WS
Sbjct: 475 RVRCLLSQSQLPRSFWGEALNTVVHVLNLTPCVPLEFDVPDRIWS 519



 Score = 27.3 bits (59), Expect(3) = 5e-10
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = -2

Query: 184 PQQNRIAERMNKTIVE 137
           PQ N +AERMN+T+VE
Sbjct: 459 PQLNGLAERMNRTLVE 474



 Score = 23.1 bits (48), Expect(3) = 5e-10
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 218 HGIRHEQIVPKT 183
           HGIRH++  PKT
Sbjct: 447 HGIRHQKTSPKT 458


>emb|CAN74178.1| hypothetical protein VITISV_029257 [Vitis vinifera]
          Length = 623

 Score = 60.1 bits (144), Expect(2) = 7e-10
 Identities = 27/45 (60%), Positives = 34/45 (75%)
 Frame = -3

Query: 138 RMRCMLSHSKLFRSYWVEIMRTAVHVINLSPSKSLNSDYPERVWS 4
           R+RCMLSH+KL +S+W E MRT V +INLSPS  L  D  ER+W+
Sbjct: 225 RIRCMLSHAKLPKSFWGEAMRTVVDLINLSPSYPLEGDILERIWT 269



 Score = 28.1 bits (61), Expect(2) = 7e-10
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = -2

Query: 214 GFVMSRLFPR-PQQNRIAERMNKTIVE 137
           G  + +  P+ PQQN + ERMN+TI +
Sbjct: 198 GIXLEKTVPKTPQQNGVVERMNRTICD 224