BLASTX nr result

ID: Coptis25_contig00023232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023232
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27519.3| unnamed protein product [Vitis vinifera]               76   2e-24
ref|XP_002273043.1| PREDICTED: uncharacterized protein LOC100252...    76   2e-24
ref|XP_002515024.1| prenyl-dependent CAAX protease, putative [Ri...    72   3e-24
ref|XP_004143052.1| PREDICTED: uncharacterized protein LOC101207...    70   1e-22
ref|XP_003630031.1| hypothetical protein MTR_8g089550 [Medicago ...    64   2e-21

>emb|CBI27519.3| unnamed protein product [Vitis vinifera]
          Length = 350

 Score = 76.3 bits (186), Expect(2) = 2e-24
 Identities = 45/93 (48%), Positives = 58/93 (62%)
 Frame = +3

Query: 63  LTTSRTKKVEDSAVVDKSSARDDLLVGQSNGVLLNDNLVGKNLISSTPREVVLQAYNVTS 242
           L T++    ED+ + D+  + DD  V  +  V   DNL  +  I+   R  VLQA  VTS
Sbjct: 111 LQTNKIAPNEDNGLEDRFPSEDDS-VPDNKKVSPIDNLAAQGSITIPSRGAVLQACTVTS 169

Query: 243 GLILALGLVIRQVSQIAFIEGLPVVDCSSEVSF 341
           GLI ALG++IRQVS  A IEGLP++DCS EVSF
Sbjct: 170 GLIAALGIIIRQVSHTASIEGLPILDCSMEVSF 202



 Score = 60.8 bits (146), Expect(2) = 2e-24
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = +2

Query: 353 FETWHLELIIGLVVLISSSRYLLLQMWPDFAESSE 457
           FE WHLELI GLV+++SS R+LLL+ WPDFAESSE
Sbjct: 204 FEMWHLELIAGLVIMVSSCRFLLLKTWPDFAESSE 238


>ref|XP_002273043.1| PREDICTED: uncharacterized protein LOC100252714 [Vitis vinifera]
          Length = 314

 Score = 76.3 bits (186), Expect(2) = 2e-24
 Identities = 45/93 (48%), Positives = 58/93 (62%)
 Frame = +3

Query: 63  LTTSRTKKVEDSAVVDKSSARDDLLVGQSNGVLLNDNLVGKNLISSTPREVVLQAYNVTS 242
           L T++    ED+ + D+  + DD  V  +  V   DNL  +  I+   R  VLQA  VTS
Sbjct: 75  LQTNKIAPNEDNGLEDRFPSEDDS-VPDNKKVSPIDNLAAQGSITIPSRGAVLQACTVTS 133

Query: 243 GLILALGLVIRQVSQIAFIEGLPVVDCSSEVSF 341
           GLI ALG++IRQVS  A IEGLP++DCS EVSF
Sbjct: 134 GLIAALGIIIRQVSHTASIEGLPILDCSMEVSF 166



 Score = 60.8 bits (146), Expect(2) = 2e-24
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = +2

Query: 353 FETWHLELIIGLVVLISSSRYLLLQMWPDFAESSE 457
           FE WHLELI GLV+++SS R+LLL+ WPDFAESSE
Sbjct: 168 FEMWHLELIAGLVIMVSSCRFLLLKTWPDFAESSE 202


>ref|XP_002515024.1| prenyl-dependent CAAX protease, putative [Ricinus communis]
           gi|223546075|gb|EEF47578.1| prenyl-dependent CAAX
           protease, putative [Ricinus communis]
          Length = 290

 Score = 72.4 bits (176), Expect(2) = 3e-24
 Identities = 43/81 (53%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
 Frame = +3

Query: 108 DKSSARDDLLVGQSNGVLLNDNLVG---KNLISSTPREVVLQAYNVTSGLILALGLVIRQ 278
           DKS   +D      +G  L D+ V    + LIS   R  VLQA  VTSGLI ALG++IRQ
Sbjct: 65  DKSFTEND------DGSSLEDSTVNNIMEKLISIPSRRAVLQACTVTSGLIAALGILIRQ 118

Query: 279 VSQIAFIEGLPVVDCSSEVSF 341
           VS +A +EGLP++DCSSEVSF
Sbjct: 119 VSHVASVEGLPILDCSSEVSF 139



 Score = 64.3 bits (155), Expect(2) = 3e-24
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +2

Query: 356 ETWHLELIIGLVVLISSSRYLLLQMWPDFAESSE 457
           ETWH EL+IGLVVLISSSRYLLL  WPDFAES+E
Sbjct: 142 ETWHFELVIGLVVLISSSRYLLLMTWPDFAESTE 175


>ref|XP_004143052.1| PREDICTED: uncharacterized protein LOC101207590 [Cucumis sativus]
          Length = 304

 Score = 70.5 bits (171), Expect(2) = 1e-22
 Identities = 41/89 (46%), Positives = 57/89 (64%)
 Frame = +3

Query: 75  RTKKVEDSAVVDKSSARDDLLVGQSNGVLLNDNLVGKNLISSTPREVVLQAYNVTSGLIL 254
           R ++  +   +  SSA D+    + N    +D+     LI+ + R  VLQA  +TSGLI 
Sbjct: 67  RLERNREEVSITSSSADDNAQEVKMNS---SDSSPKNYLINISSRSSVLQACIITSGLIA 123

Query: 255 ALGLVIRQVSQIAFIEGLPVVDCSSEVSF 341
           ALG++IRQVS +A IEGLPV+DC+SEVSF
Sbjct: 124 ALGVIIRQVSHVASIEGLPVIDCTSEVSF 152



 Score = 60.8 bits (146), Expect(2) = 1e-22
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = +2

Query: 353 FETWHLELIIGLVVLISSSRYLLLQMWPDFAESSE 457
           FE W L+LIIGLVVLISSSR+ LL+ WPDFAESSE
Sbjct: 154 FEVWQLQLIIGLVVLISSSRFFLLKTWPDFAESSE 188


>ref|XP_003630031.1| hypothetical protein MTR_8g089550 [Medicago truncatula]
           gi|355524053|gb|AET04507.1| hypothetical protein
           MTR_8g089550 [Medicago truncatula]
          Length = 276

 Score = 63.9 bits (154), Expect(2) = 2e-21
 Identities = 45/91 (49%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
 Frame = +3

Query: 75  RTKKVEDSAVVDKSSARDDLLVGQSN--GVLLNDNLVGKNLISSTPREVVLQAYNVTSGL 248
           ++K+    A VD S   DD  V   N     LN  +   N I S  R  VLQA  +TS L
Sbjct: 42  KSKREGPEAFVDLS---DDKFVQNDNLLDTSLNPPVENANPIPS--RSAVLQACILTSAL 96

Query: 249 ILALGLVIRQVSQIAFIEGLPVVDCSSEVSF 341
           I A G VIRQVS +A IEGLPV+DCS+EVSF
Sbjct: 97  IAAFGTVIRQVSHVASIEGLPVLDCSTEVSF 127



 Score = 63.5 bits (153), Expect(2) = 2e-21
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +2

Query: 353 FETWHLELIIGLVVLISSSRYLLLQMWPDFAESSE 457
           FE WHLELI G+VVLISSSRYLLL+ WPDFAESS+
Sbjct: 129 FEMWHLELITGIVVLISSSRYLLLKTWPDFAESSK 163


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