BLASTX nr result

ID: Coptis25_contig00023221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023221
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71702.1| hypothetical protein VITISV_038718 [Vitis vinifera]   221   2e-69
ref|XP_003635461.1| PREDICTED: LOW QUALITY PROTEIN: abnormal spi...   221   2e-69
emb|CBI23512.3| unnamed protein product [Vitis vinifera]              221   2e-69
ref|XP_002518502.1| hypothetical protein RCOM_0905210 [Ricinus c...   204   4e-60
ref|XP_004145177.1| PREDICTED: abnormal spindle-like microcephal...   199   1e-59

>emb|CAN71702.1| hypothetical protein VITISV_038718 [Vitis vinifera]
          Length = 1251

 Score =  221 bits (562), Expect(2) = 2e-69
 Identities = 105/139 (75%), Positives = 124/139 (89%)
 Frame = -3

Query: 549 AKSQSSLPIKYGIDGIDGGSPLLSGRQSNIKSTRQVIHDFLLSMVMHGEGDLLAHLVIVG 370
           AKSQS LPIKYGIDG+DGGSPLL  ++SNIKS+RQ+IHDFL S +MHGEG+LLAHLVIVG
Sbjct: 352 AKSQSCLPIKYGIDGVDGGSPLLFSQRSNIKSSRQIIHDFLSSDIMHGEGNLLAHLVIVG 411

Query: 369 YKVSYQQCPVLDYDYKVKDLFDDLQNGVRLCRAIQLLKCDTSMLTKMVVPSDTHKNDLVN 190
           YKVSY+QC + +YD++V DLFDDLQ+GVRLCR IQLL  D+S+L KMVVPSDTHK +L N
Sbjct: 412 YKVSYEQCCLTEYDFRVTDLFDDLQDGVRLCRTIQLLLHDSSILVKMVVPSDTHKKNLAN 471

Query: 189 CGVALQYLKQAGVPLFDED 133
           CG+ALQYLKQAGV L+D+D
Sbjct: 472 CGIALQYLKQAGVSLYDDD 490



 Score = 67.8 bits (164), Expect(2) = 2e-69
 Identities = 33/44 (75%), Positives = 37/44 (84%)
 Frame = -2

Query: 133 LFDEDGATIVVEDVATG*KELILSLLWNIFVHLQRPLLVDKTLL 2
           L+D+DG  IV EDVA G KEL LSLLWNIFVHLQ PLL++KTLL
Sbjct: 486 LYDDDGMVIVGEDVANGDKELTLSLLWNIFVHLQLPLLINKTLL 529


>ref|XP_003635461.1| PREDICTED: LOW QUALITY PROTEIN: abnormal spindle-like
           microcephaly-associated protein homolog, partial [Vitis
           vinifera]
          Length = 1022

 Score =  221 bits (562), Expect(2) = 2e-69
 Identities = 105/139 (75%), Positives = 124/139 (89%)
 Frame = -3

Query: 549 AKSQSSLPIKYGIDGIDGGSPLLSGRQSNIKSTRQVIHDFLLSMVMHGEGDLLAHLVIVG 370
           AKSQS LPIKYGIDG+DGGSPLL  ++SNIKS+RQ+IHDFL S +MHGEG+LLAHLVIVG
Sbjct: 352 AKSQSCLPIKYGIDGVDGGSPLLFSQRSNIKSSRQIIHDFLSSDIMHGEGNLLAHLVIVG 411

Query: 369 YKVSYQQCPVLDYDYKVKDLFDDLQNGVRLCRAIQLLKCDTSMLTKMVVPSDTHKNDLVN 190
           YKVSY+QC + +YD++V DLFDDLQ+GVRLCR IQLL  D+S+L KMVVPSDTHK +L N
Sbjct: 412 YKVSYEQCCLTEYDFRVTDLFDDLQDGVRLCRTIQLLLHDSSILVKMVVPSDTHKKNLAN 471

Query: 189 CGVALQYLKQAGVPLFDED 133
           CG+ALQYLKQAGV L+D+D
Sbjct: 472 CGIALQYLKQAGVSLYDDD 490



 Score = 67.8 bits (164), Expect(2) = 2e-69
 Identities = 33/44 (75%), Positives = 37/44 (84%)
 Frame = -2

Query: 133 LFDEDGATIVVEDVATG*KELILSLLWNIFVHLQRPLLVDKTLL 2
           L+D+DG  IV EDVA G KEL LSLLWNIFVHLQ PLL++KTLL
Sbjct: 486 LYDDDGMVIVGEDVANGDKELTLSLLWNIFVHLQLPLLINKTLL 529


>emb|CBI23512.3| unnamed protein product [Vitis vinifera]
          Length = 943

 Score =  221 bits (562), Expect(2) = 2e-69
 Identities = 105/139 (75%), Positives = 124/139 (89%)
 Frame = -3

Query: 549 AKSQSSLPIKYGIDGIDGGSPLLSGRQSNIKSTRQVIHDFLLSMVMHGEGDLLAHLVIVG 370
           AKSQS LPIKYGIDG+DGGSPLL  ++SNIKS+RQ+IHDFL S +MHGEG+LLAHLVIVG
Sbjct: 352 AKSQSCLPIKYGIDGVDGGSPLLFSQRSNIKSSRQIIHDFLSSDIMHGEGNLLAHLVIVG 411

Query: 369 YKVSYQQCPVLDYDYKVKDLFDDLQNGVRLCRAIQLLKCDTSMLTKMVVPSDTHKNDLVN 190
           YKVSY+QC + +YD++V DLFDDLQ+GVRLCR IQLL  D+S+L KMVVPSDTHK +L N
Sbjct: 412 YKVSYEQCCLTEYDFRVTDLFDDLQDGVRLCRTIQLLLHDSSILVKMVVPSDTHKKNLAN 471

Query: 189 CGVALQYLKQAGVPLFDED 133
           CG+ALQYLKQAGV L+D+D
Sbjct: 472 CGIALQYLKQAGVSLYDDD 490



 Score = 67.8 bits (164), Expect(2) = 2e-69
 Identities = 33/44 (75%), Positives = 37/44 (84%)
 Frame = -2

Query: 133 LFDEDGATIVVEDVATG*KELILSLLWNIFVHLQRPLLVDKTLL 2
           L+D+DG  IV EDVA G KEL LSLLWNIFVHLQ PLL++KTLL
Sbjct: 486 LYDDDGMVIVGEDVANGDKELTLSLLWNIFVHLQLPLLINKTLL 529


>ref|XP_002518502.1| hypothetical protein RCOM_0905210 [Ricinus communis]
           gi|223542347|gb|EEF43889.1| hypothetical protein
           RCOM_0905210 [Ricinus communis]
          Length = 1282

 Score =  204 bits (520), Expect(2) = 4e-60
 Identities = 99/139 (71%), Positives = 122/139 (87%)
 Frame = -3

Query: 549 AKSQSSLPIKYGIDGIDGGSPLLSGRQSNIKSTRQVIHDFLLSMVMHGEGDLLAHLVIVG 370
           AKS S+L +KYGIDG+DGGSPLL   QS+IKS+RQ+I+DFL S +M GEG+LLAHLVIVG
Sbjct: 332 AKSSSALSLKYGIDGVDGGSPLLFVVQSSIKSSRQMINDFLSSEIMLGEGNLLAHLVIVG 391

Query: 369 YKVSYQQCPVLDYDYKVKDLFDDLQNGVRLCRAIQLLKCDTSMLTKMVVPSDTHKNDLVN 190
           Y+VSYQQCP+ +YD++V DLF+DLQ+G+RLCRAIQLL+ D+S+L KMVVPSDT K +LVN
Sbjct: 392 YRVSYQQCPLFEYDFRVTDLFEDLQDGLRLCRAIQLLRSDSSILMKMVVPSDTRKKNLVN 451

Query: 189 CGVALQYLKQAGVPLFDED 133
           CG+ALQYLK AGV L D+D
Sbjct: 452 CGIALQYLKHAGVRLCDDD 470



 Score = 52.8 bits (125), Expect(2) = 4e-60
 Identities = 23/45 (51%), Positives = 34/45 (75%)
 Frame = -2

Query: 136 RLFDEDGATIVVEDVATG*KELILSLLWNIFVHLQRPLLVDKTLL 2
           RL D+DG  I+ +D+A G KEL +SLLW++F+ LQ PLL++  +L
Sbjct: 465 RLCDDDGMMIMEDDIANGDKELTISLLWSMFIQLQLPLLINSKIL 509


>ref|XP_004145177.1| PREDICTED: abnormal spindle-like microcephaly-associated protein
           homolog [Cucumis sativus]
          Length = 1368

 Score =  199 bits (506), Expect(2) = 1e-59
 Identities = 100/139 (71%), Positives = 118/139 (84%)
 Frame = -3

Query: 549 AKSQSSLPIKYGIDGIDGGSPLLSGRQSNIKSTRQVIHDFLLSMVMHGEGDLLAHLVIVG 370
           AK QSSLP+ YGIDG+DGGSPLL   QS IKS+RQ+I+DFL S VMHGEG+LLAHLVI+G
Sbjct: 354 AKCQSSLPLDYGIDGVDGGSPLLFLVQSVIKSSRQMINDFLSSDVMHGEGNLLAHLVIMG 413

Query: 369 YKVSYQQCPVLDYDYKVKDLFDDLQNGVRLCRAIQLLKCDTSMLTKMVVPSDTHKNDLVN 190
           YKVSY Q P+ +YD+K+ DLF D+Q+GVRLCRAIQLL  D S+LTK+VVPSD+HK +L N
Sbjct: 414 YKVSYAQRPISEYDFKITDLFVDIQDGVRLCRAIQLLLNDCSILTKIVVPSDSHKKNLAN 473

Query: 189 CGVALQYLKQAGVPLFDED 133
           CG A+QYLKQAGV L DED
Sbjct: 474 CGKAVQYLKQAGVALCDED 492



 Score = 56.6 bits (135), Expect(2) = 1e-59
 Identities = 27/44 (61%), Positives = 35/44 (79%)
 Frame = -2

Query: 133 LFDEDGATIVVEDVATG*KELILSLLWNIFVHLQRPLLVDKTLL 2
           L DEDG  +V +D+A G KE++LSLL N+FVHLQ PL+V+K LL
Sbjct: 488 LCDEDGMILVEDDIANGEKEMVLSLLSNMFVHLQLPLIVNKNLL 531


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