BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023216
         (1059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   127   5e-27
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   107   4e-21
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   103   9e-20
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   102   2e-19
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    95   3e-17

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  127 bits (319), Expect = 5e-27
 Identities = 98/340 (28%), Positives = 156/340 (45%), Gaps = 11/340 (3%)
 Frame = -1

Query: 1002 PWLMFTEFQEDEEGSHIKDEQGNSVVSHNFFSLSEEKTYXXXXXXXXXXXCMGSPYGWLI 823
            PWLM  E    +E S I+           F+S    K Y           C GSPYGWL+
Sbjct: 970  PWLMLAE----KENSEIR----------GFYSPLSGKVYEIRLPEVVGKWCWGSPYGWLV 1015

Query: 822  ILHKQLE--IINPLSHVRFLLPPLSTIKDYSR--NSTTYWFHKKVLAXXXXXXXXXXLRD 655
             +   L+  ++NPL+ V+ LLP L    + +   +S+T     K +              
Sbjct: 1016 TIGTDLDMCLLNPLTRVQILLPSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAPSSP 1075

Query: 654  QFVAFILFNQ--KVVFARPGNSAWVAIKLPSTTNDDILHFNNQFYIIDKEGILRSFDITS 481
                 I+++   ++ F +PG+  W  ++  S   DDI++FN  F  ++    +   DI+ 
Sbjct: 1076 DCAVMIIYSDYGRLAFTKPGHQTWTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDISG 1135

Query: 480  PNPVGIDIALSPVHINDD---CDSFYLVELLGELHMAVKYYSFDNVLLEDLKDENGHGEY 310
                 I  A +P   + D    ++ YLVE  GE++M  +     N+     +D      +
Sbjct: 1136 SQLKTIRFAAAPALQDVDEIEYEAKYLVESGGEIYMVTR-----NLYDTARRDIPYMRTW 1190

Query: 309  YFRVFKFHLCTEKWEEVYSLGDYAFFVGSSTSFSLLASDYRGCKPSSIYFTDRLLCNMH- 133
             F V K  +C ++WEEV +L   +FF+G++ SFS  ASDY   + +SIYFTD     ++ 
Sbjct: 1191 TFSVLKLDMCNKRWEEVENLDHCSFFLGNNHSFSTWASDYPEFRKNSIYFTDDYCGFLNI 1250

Query: 132  SWGFCMGIYNLE-TDTSVIFCRDEKFSLYSCPVWIMPNLC 16
               F MGIYN + T         +  S++S P+WI P+ C
Sbjct: 1251 PRNFDMGIYNFQNTQIEHYPVGHDALSMFSAPLWIRPSFC 1290


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  107 bits (268), Expect = 4e-21
 Identities = 99/374 (26%), Positives = 158/374 (42%), Gaps = 41/374 (10%)
 Frame = -1

Query: 1014 PKTLPWLMFTEFQEDEEGSHIKDEQGNSVVSHNFFSLSEEKT-YXXXXXXXXXXXCMGSP 838
            P  LPWLM  + Q     S              FFSLS  K  +             GS 
Sbjct: 48   PPQLPWLMLPQSQSQSNQSR-----------RAFFSLSTNKFHFLNLPEVSYRKRHCGSS 96

Query: 837  YGWLIILHKQ--LEIINPLSHVRFLLPPLSTI------------KDYS------------ 736
            +GWL+IL     + +INPL+  +  LPPLS+             ++Y+            
Sbjct: 97   HGWLMILDDTPTILLINPLTRAKLSLPPLSSFPNVISFNYSDIGREYALRNLLGERVTVS 156

Query: 735  -RNSTTYWFHKKVLAXXXXXXXXXXLRDQFVAFILFNQ--KVVFARPGNSAWVAIKLPST 565
             R     +  K VL+            + FV   + NQ   + + R G+ +W  ++   +
Sbjct: 157  LRQMRDSFIRKVVLSSSPLKD------NNFVVIAILNQTDDLAYCRNGDKSWSLVENARS 210

Query: 564  TNDDILHFNNQFYIIDKEGILRSFDITSPNPVGIDIALSPVHINDDCDSFYLVELLGELH 385
              +D++  N  FY ++K G +   DI+S +P  +    +P     D    YLV    EL 
Sbjct: 211  FCEDVIFVNGMFYAVNKAGQIVICDISSDSP-RVSFMETPRQAGGDMQ--YLVNSGDELL 267

Query: 384  MAVKY----YSFDNVLLEDLKDENGHGEYYFRVFKFHLCTEKWEEVYSLGDYAFFVGSST 217
            +  +Y    Y FD+    D++    +    F VF+      +W  + +LGD A F+G ++
Sbjct: 268  LVTRYLDLEYEFDH---PDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENS 324

Query: 216  SFSLLASDYRGCKPSSIYFTDRLL---CNMHSWGFCMGIYNLETDT-SVIFCRDEKFS-- 55
            S SL A+D+ GC  + IY+TD  L    + H     +GI+ L  +T   + C    F+  
Sbjct: 325  SLSLSATDFSGCMGNCIYYTDDYLDANYDGHFGDHDLGIFKLCDETIEPLPCYPRNFTSP 384

Query: 54   -LYSCPVWIMPNLC 16
              +S P+W+ PN C
Sbjct: 385  LQWSPPLWVSPNPC 398


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  103 bits (256), Expect = 9e-20
 Identities = 99/380 (26%), Positives = 160/380 (42%), Gaps = 33/380 (8%)
 Frame = -1

Query: 1056 WRSVIVDLRRRHFKPKTLPWLMFTEFQEDEEGSHIKDEQGNSVVSHNFFSLSEEKT-YXX 880
            WR+ +   +  H  P  LPWLM  + Q                    FFSLS  K  +  
Sbjct: 35   WRASVP--KTPHHLPTQLPWLMLPQSQPHH-------------THRPFFSLSLNKFHFLQ 79

Query: 879  XXXXXXXXXCMGSPYGWLIILHKQLEI--INPLSHVRFLLPPLSTI------------KD 742
                       GS +GWL+IL +  EI  +NPL+  +  LPPLST             ++
Sbjct: 80   LPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPPLSTFPNVVRFNFADVGRE 139

Query: 741  YSRNSTTYWFHKKVL-------AXXXXXXXXXXLRDQFVAFILFNQ--KVVFARPGNSAW 589
            Y+  +++   + + L                      F+A ++ NQ   +   R  + +W
Sbjct: 140  YALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSDFIAVVILNQTGDLALCRKSDDSW 199

Query: 588  VAIKLPSTTNDDILHFNNQFYIIDKEGILRSFDITSPNPVGIDIALSPVHINDDCDSFYL 409
              ++   + ++D++     FY ++K G +   D++  +P  + I   P     D    YL
Sbjct: 200  TFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGSSP-RVSIIEMPQQFGGDLQ--YL 256

Query: 408  VELLGELHMAVKYYSFDNVLLEDLKDENGHGEYYFRVFKFHLC-----TEKWEEVYSLGD 244
            VE   EL +  +Y      L  D+  E       +R  +F +C       +WE V SLGD
Sbjct: 257  VESGEELLLVTRYLD----LTYDV--EXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGD 310

Query: 243  YAFFVGSSTSFSLLASDYRGCKPSSIYFTDRLLCNMH---SWGFCMGIYNLETDTSVIFC 73
             A F+G + S SL + D+ GCK + IY+TD    + +        +GI+NLE D S+   
Sbjct: 311  RALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLE-DGSIEPL 369

Query: 72   RDEKFSL-YSCPVWIMPNLC 16
                F + +  P+W+ PN C
Sbjct: 370  PCSHFRIRWPPPLWVTPNPC 389


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  102 bits (253), Expect = 2e-19
 Identities = 99/378 (26%), Positives = 160/378 (42%), Gaps = 31/378 (8%)
 Frame = -1

Query: 1056 WRSVIVDLRRRHFKPKTLPWLMFTEFQEDEEGSHIKDEQGNSVVSHNFFSLSEEKT-YXX 880
            WR+ +   +  H  P  LPWLM  + Q                    FFSLS  K  +  
Sbjct: 35   WRASVP--KTPHHLPTQLPWLMLPQSQPHH-------------THRPFFSLSLNKFHFLQ 79

Query: 879  XXXXXXXXXCMGSPYGWLIILHKQLEI--INPLSHVRFLLPPLSTI------------KD 742
                       GS +GWL+IL +  EI  +NPL+  +  LPPLST             ++
Sbjct: 80   LPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPPLSTFPNVVRFNFADVGRE 139

Query: 741  YSRNSTTYWFHKKVL-------AXXXXXXXXXXLRDQFVAFILFNQ--KVVFARPGNSAW 589
            Y+  +++   + + L                      F+A ++ NQ   +   R  + +W
Sbjct: 140  YALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSDFIAVVILNQTGDLALCRKSDDSW 199

Query: 588  VAIKLPSTTNDDILHFNNQFYIIDKEGILRSFDITSPNPVGIDIALSPVHINDDCDSFYL 409
              ++   +  +D++     FY ++K G +   D++  +P  + I   P     D    YL
Sbjct: 200  TFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVSGSSP-RVSIIEMPQQFGGDLQ--YL 256

Query: 408  VELLGELHMAVKYYSFDNVLLEDLKDENGHGEY---YFRVFKFHLCTEKWEEVYSLGDYA 238
            VE   EL +  +Y      L  D++ +     Y    F+V +  L   +WE V SLGD A
Sbjct: 257  VESGEELLLVTRYLD----LTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRA 312

Query: 237  FFVGSSTSFSLLASDYRGCKPSSIYFTDRLLCNMH---SWGFCMGIYNLETDTSVIFCRD 67
             F+G + S SL + D+ GCK + IY+TD    + +        +GI+NLE D S+     
Sbjct: 313  LFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLE-DGSIEPLPC 371

Query: 66   EKFSL-YSCPVWIMPNLC 16
              F + +  P+W+ PN C
Sbjct: 372  SHFRIRWPPPLWVTPNPC 389


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 100/384 (26%), Positives = 155/384 (40%), Gaps = 37/384 (9%)
 Frame = -1

Query: 1056 WRSVIVDLRRRHFKPKTLPWLMFTEFQEDEEGSHIKDEQGNSVVSHNFFSLSEEKTYXXX 877
            W+S I   +  +  P  LPWL+  + Q ++                 FF+LS  K +   
Sbjct: 36   WKSSIP--KTPNHLPPQLPWLLLPQSQSNQSSYRA------------FFNLSTYKFHSLN 81

Query: 876  XXXXXXXXC-MGSPYGWLIILHKQ--LEIINPLSHVRFLLPPLSTIK-----DYSRNSTT 721
                       GS +GWLIIL     + +INPL+  +  LP +S+       DY+     
Sbjct: 82   LPEASHRKKHCGSSHGWLIILDDSPSILVINPLTRRKIHLPAISSFPNVVSFDYANVGRE 141

Query: 720  YW-------------------FHKKVLAXXXXXXXXXXLRDQFVAFILF--NQKVVFARP 604
            Y                    F KKV+             D FVA  +      + + + 
Sbjct: 142  YLLVNPQGERNTASLRQMRDGFIKKVVMSSSPLEKKG---DFFVAMAILCSTGDLAYCKN 198

Query: 603  GNSAWVAIKLPSTTNDDILHFNNQFYIIDKEGILRSFDITSPNPVGIDIALSPVHINDDC 424
            G+  W  ++   + ++D+++FN  FY ++K G +   D+   +P  +    +P  I  D 
Sbjct: 199  GDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVVCDVNGNSPK-VSFIETPRQIGGDM 257

Query: 423  DSFYLVELLGELHMAVKYYSFDNVLLEDLKDENGHGEYYFRVFKFHLCTEKWEEVYSLGD 244
               YLV     L +  +Y   D        D   +    F VFK  L   +WE V SLGD
Sbjct: 258  Q--YLVSSGDGLLLVTRYLDLDVEF-----DIFIYKTARFEVFKLDLNGPRWERVTSLGD 310

Query: 243  YAFFVGSSTSFSLLASDYRGCKPSSIYFTDRLLCNM---HSWGFCMGIYNLETDTSV--- 82
               F+G ++S +L AS   GC    IY+TD    N    H     +GI+ L +D S+   
Sbjct: 311  MMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNYDGHIGEHDLGIFKL-SDGSIEPL 369

Query: 81   -IFCRDEKFSL-YSCPVWIMPNLC 16
              + R+    L +  P+WI PN C
Sbjct: 370  PCYPRNSYSRLQWPPPLWISPNPC 393