BLASTX nr result

ID: Coptis25_contig00023208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023208
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635555.1| PREDICTED: uncharacterized protein LOC100855...    57   2e-06

>ref|XP_003635555.1| PREDICTED: uncharacterized protein LOC100855047 [Vitis vinifera]
           gi|296083544|emb|CBI23537.3| unnamed protein product
           [Vitis vinifera] gi|296088930|emb|CBI38496.3| unnamed
           protein product [Vitis vinifera]
          Length = 54

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/51 (52%), Positives = 31/51 (60%)
 Frame = +3

Query: 60  RKRFLSLPLXXXXXXXXXXXXXXXFGPPLDEYWTKRLQEEAAAKERETDSK 212
           R+RFLS PL               FGPPLDEYW K+LQEEAAAKE +  S+
Sbjct: 4   RRRFLSFPLVIGAVVIGVVSGKAIFGPPLDEYWKKKLQEEAAAKETDASSR 54


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